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 BL-SOM result

Position of SOM areas by tissue specificity of gene expression and metabolite accumulation.	0	1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29
0	40	12	8	12	7	14	19	12	4	16	15	8	18	9	19	9	5	18	10	11	19	13	12	10	13	11	20	25	25	25
1	9	22	2	8	3	7	4	10	6	8	5	5	9	7	7	12	7	11	8	9	3	14	7	14	17	5	11	7	4	21
2	14	13	19	10	12	9	14	7	16	5	4	5	10	15	24	21	15	18	9	11	13	14	17	16	10	8	10	16	9	18
3	11	10	12	15	13	7	10	13	18	22	29	18	14	25	14	12	14	14	17	15	16	6	9	15	8	7	19	16	9	12
4	9	11	15	13	17	17	14	14	14	30	14	33	34	27	18	23	14	16	16	9	24	12	20	15	12	11	13	25	10	14
5	13	12	15	21	10	9	22	24	13	29	18	27	25	28	19	21	15	18	17	17	9	10	16	13	4	25	7	19	12	7
6	16	15	21	20	18	26	15	25	20	25	14	30	21	25	25	28	17	20	10	9	18	22	13	20	5	8	5	15	8	21
7	16	13	27	25	20	19	22	20	20	12	26	25	21	20	24	15	10	21	17	18	12	15	5	8	9	14	14	19	5	9
8	11	14	22	19	17	16	26	21	19	20	26	22	11	23	25	17	24	16	12	12	22	14	13	17	12	14	19	17	10	11
9	20	9	13	20	12	25	22	17	14	22	21	19	20	10	24	11	21	14	19	18	15	6	13	19	11	18	17	18	4	22
10	34	22	7	19	19	16	20	25	20	18	24	33	20	23	19	13	24	23	21	15	21	21	18	13	10	16	13	20	13	8
11	11	9	12	13	28	14	19	18	17	18	15	16	24	16	12	15	25	17	20	17	27	23	16	15	15	17	19	21	10	23
12	17	17	11	16	9	21	19	21	26	18	21	14	27	11	18	10	11	19	14	26	18	21	18	22	23	17	19	16	9	16
13	16	6	15	13	15	18	16	21	28	14	19	21	14	17	14	11	34	14	23	18	12	20	33	13	11	12	23	21	16	16
14	32	5	10	15	20	13	16	27	24	12	16	6	21	16	19	15	25	22	20	14	23	15	27	56	21	19	22	23	14	17
15	3	14	15	13	11	7	19	15	21	8	17	14	20	15	20	22	17	19	25	21	13	19	15	12	13	20	9	23	13	24
16	10	9	6	6	10	17	7	15	22	19	19	13	10	17	8	24	10	21	13	15	10	12	15	22	24	23	15	28	11	25
17	20	18	18	12	7	11	11	20	8	10	15	20	7	27	7	20	21	16	15	19	15	15	19	31	16	19	19	23	11	17
18	10	7	9	19	13	35	8	8	18	17	16	13	17	10	1	10	19	19	11	9	14	18	15	29	15	25	9	23	13	13
19	15	10	15	16	23	10	14	17	5	12	17	13	11	4	11	16	20	10	10	17	15	19	10	9	9	17	13	18	6	28
20	8	13	22	21	24	7	17	5	15	22	11	9	30	9	13	11	20	10	12	11	7	15	4	28	12	18	9	18	10	12
21	30	23	9	23	14	10	22	15	23	17	29	35	18	38	36	27	11	5	15	20	10	13	6	11	8	11	12	10	9	19
22	1	2	10	10	14	14	16	19	22	29	22	38	20	27	16	12	7	22	4	5	6	22	6	22	5	17	8	15	6	15
23	27	12	37	21	13	11	18	16	20	23	13	19	7	5	3	4	9	19	1	22	17	14	7	13	14	10	12	9	12	14
24	14	13	13	14	10	18	16	19	8	7	22	8	23	14	8	3	16	11	1	9	9	12	6	3	13	4	11	8	6	9
25	28	18	32	17	17	17	23	28	16	9	31	6	20	10	28	7	43	10	12	17	16	7	25	9	24	10	18	11	8	20

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• Gene information ▼

1. Metabolite information

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2. Gene information

No.	ID	Short description	Curator summary	Computational description
1	at1g03020 eFP TAIR	Thioredoxin superfamily protein	-	Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62930.1); Has 1690 Blast hits to 1687 proteins in 285 species: Archae - 0; Bacteria - 112; Metazoa - 344; Fungi - 348; Plants - 762; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
2	at1g08930 eFP TAIR	Major facilitator superfamily protein	encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold.	EARLY RESPONSE TO DEHYDRATION 6 (ERD6); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sugar transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to chitin, response to abscisic acid stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: ERD (early response to dehydration) six-like 1 (TAIR:AT1G08920.1); Has 27777 Blast hits to 27182 proteins in 2058 species: Archae - 500; Bacteria - 11725; Metazoa - 4936; Fungi - 6599; Plants - 2746; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink).
3	at1g21910 eFP TAIR	Integrase-type DNA-binding superfamily protein	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G77640.1); Has 6386 Blast hits to 5661 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 9; Plants - 5687; Viruses - 2; Other Eukaryotes - 589 (source: NCBI BLink).
4	at1g22570 eFP TAIR	Major facilitator superfamily protein	-	Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G22550.1); Has 7774 Blast hits to 7634 proteins in 1454 species: Archae - 0; Bacteria - 4021; Metazoa - 491; Fungi - 475; Plants - 2200; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink).
5	at1g66090 eFP TAIR	Disease resistance protein (TIR-NBS class)	-	Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G56540.1); Has 7229 Blast hits to 7084 proteins in 242 species: Archae - 0; Bacteria - 86; Metazoa - 1; Fungi - 7; Plants - 7129; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
6	at1g66160 eFP TAIR	CYS, MET, PRO, and GLY protein 1	-	"CYS, MET, PRO, and GLY protein 1" (CMPG1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G37490.1); Has 2372 Blast hits to 2357 proteins in 158 species: Archae - 0; Bacteria - 16; Metazoa - 212; Fungi - 52; Plants - 1883; Viruses - 3; Other Eukaryotes - 206 (source: NCBI BLink).
7	at1g67470 eFP TAIR	Protein kinase superfamily protein	-	Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G65250.1); Has 33748 Blast hits to 33462 proteins in 1596 species: Archae - 6; Bacteria - 3452; Metazoa - 6540; Fungi - 924; Plants - 20581; Viruses - 40; Other Eukaryotes - 2205 (source: NCBI BLink).
8	at1g72520 eFP TAIR	PLAT/LH2 domain-containing lipoxygenase family protein	-	PLAT/LH2 domain-containing lipoxygenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: growth, jasmonic acid biosynthetic process, response to wounding, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase 3 (TAIR:AT1G17420.1); Has 1471 Blast hits to 1433 proteins in 182 species: Archae - 0; Bacteria - 79; Metazoa - 528; Fungi - 49; Plants - 786; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
9	at3g47570 eFP TAIR	Leucine-rich repeat protein kinase family protein	-	Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink).
10	at3g59080 eFP TAIR	Eukaryotic aspartyl protease family protein	-	Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G42980.1); Has 2848 Blast hits to 2825 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 477; Fungi - 283; Plants - 1941; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink).
11	at4g14680 eFP TAIR	Pseudouridine synthase/archaeosine transglycosylase-like family protein	ATP sulfurylase	APS3; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: ATP sulfurylase 1 (TAIR:AT3G22890.1); Has 2059 Blast hits to 2056 proteins in 649 species: Archae - 98; Bacteria - 865; Metazoa - 242; Fungi - 201; Plants - 189; Viruses - 0; Other Eukaryotes - 464 (source: NCBI BLink).
12	at4g16563 eFP TAIR	Eukaryotic aspartyl protease family protein	-	Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G45120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
13	at5g24030 eFP TAIR	SLAC1 homologue 3	Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.	SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
14	at5g52050 eFP TAIR	MATE efflux family protein	-	MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G23030.1); Has 10796 Blast hits to 10712 proteins in 2003 species: Archae - 245; Bacteria - 7617; Metazoa - 145; Fungi - 324; Plants - 1294; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink).
15	at5g57560 eFP TAIR	Xyloglucan endotransglucosylase/hydrolase family protein	Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli	Touch 4 (TCH4); CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 2219 Blast hits to 2201 proteins in 305 species: Archae - 0; Bacteria - 284; Metazoa - 0; Fungi - 458; Plants - 1386; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).

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