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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 13 " Y:" 10 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adp012792 LinkIcon Positive ATH06p06496 LinkIcon PT112530 LinkIcon 0.961
Calciferol; MS2; Q-Tof; [M+H]+
   Calciferol
  Vitamin D2
  Ergocalciferol
  Viosterin
  Osteil
  Viosterol
  Ercalciol
  Irradiated ergosterol
  Condacaps
  Condocaps
  Condol
  Crtron
  Crystallina
  Daral
  (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol
  Davitin
  Deltalin
  Deratol
  Diactol
  Drisdol
  Ergorone
  Ertron
  Fortodyl
  Geltabs
  Hyperkil
  Irradiated ergosta-5,7,22-trien-3-beta-ol
  Metadee
PT112580 LinkIcon 0.953
delta-Tocotrienol; MS2; Q-Tof; [M+H]+
   delta-Tocotrienol
  8-Methyltocotrienol
  (R)-delta-Tocotrienol
  (2R)-2,8-dimethyl-2-[(3E,7E)-4,8,12-trimethyltrideca-3,7,11-trienyl]chroman-6-ol
ATH06p06165 LinkIcon PT111810 LinkIcon 0.951
1-O-b-D-glucopyranosyl sinapate; MS2; Q-Tof; [M+H]+
   1-O-b-D-glucopyranosyl sinapate
  1-O-Sinapoyl-beta-D-glucose
  1-O-Sinapoyl beta-D-glucoside
  [(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl] (E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate
ATH63p08121 LinkIcon PT101453 LinkIcon 0.948
2'-Deoxycytidine-5'-diphosphate sodium salt; MS2; Q-Tof; [M+H]+
   2'-Deoxycytidine-5'-diphosphate sodium salt
ATH06p06165 LinkIcon PS118102 LinkIcon 0.943
1-O-b-D-glucopyranosyl sinapate; MS2; QqQ; positive; CE 20 V
   1-O-b-D-glucopyranosyl sinapate
  1-O-Sinapoyl-beta-D-glucose
  1-O-Sinapoyl beta-D-glucoside
  3-cyanopyridine
  3-Pyridinecarbonitrile
  Nicotinic acid nitrile
  Nicotinonitrile
  Pyridine-3-carbonitrile
  beta-Pyridyl Cyanide
  3-Azabenzonitrile
  3-Pyridinecarbonitrile
  pyridine-3-carbonitrile
ATH64p07997 LinkIcon PT101453 LinkIcon 0.941
2'-Deoxycytidine-5'-diphosphate sodium salt; MS2; Q-Tof; [M+H]+
   2'-Deoxycytidine-5'-diphosphate sodium salt
ATH06p06165 LinkIcon PT111210 LinkIcon 0.938
Lignoceric acid ; MS2; Q-Tof; [M+H]+
   Lignoceric acid
  Carboxylic Acid C24
  Tetracosaoic acid
  tetracosanoic acid
PS118104 LinkIcon 0.937
1-O-b-D-glucopyranosyl sinapate; MS2; QqQ; positive; CE 40 V
   1-O-b-D-glucopyranosyl sinapate
  1-O-Sinapoyl-beta-D-glucose
  1-O-Sinapoyl beta-D-glucoside
PS046902 LinkIcon 0.934
3-cyanopyridine; MS2; QqQ; positive; CE 20 V
   3-cyanopyridine
  3-Pyridinecarbonitrile
  Nicotinic acid nitrile
  Nicotinonitrile
  Pyridine-3-carbonitrile
  beta-Pyridyl Cyanide
  3-Azabenzonitrile
  3-Pyridinecarbonitrile
ATH64p07997 LinkIcon PT111810 LinkIcon 0.934
1-O-b-D-glucopyranosyl sinapate; MS2; Q-Tof; [M+H]+
   1-O-b-D-glucopyranosyl sinapate
  1-O-Sinapoyl-beta-D-glucose
  1-O-Sinapoyl beta-D-glucoside
  [(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl] (E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate
ATH63p07330 LinkIcon PT101453 LinkIcon 0.924
2'-Deoxycytidine-5'-diphosphate sodium salt; MS2; Q-Tof; [M+H]+
   2'-Deoxycytidine-5'-diphosphate sodium salt
ATH06p06165 LinkIcon PS095302 LinkIcon 0.917
Hippuric Acid; MS2; QqQ; positive; CE 20 V
   Hippuric Acid
  Hippurate
  N-Benzoylglycine
  N-Benzoylglycine
  Benzoylaminoacetic acid
  Benzamidoacetic acid
  Phenylcarbonylaminoacetic acid
ATH13p06877 LinkIcon PT101453 LinkIcon 0.915
2'-Deoxycytidine-5'-diphosphate sodium salt; MS2; Q-Tof; [M+H]+
   2'-Deoxycytidine-5'-diphosphate sodium salt
ATH64p07997 LinkIcon PT104690 LinkIcon 0.915
3-cyanopyridine; MS2; Q-Tof; [M+H]+
   3-cyanopyridine
  3-Pyridinecarbonitrile
  Nicotinic acid nitrile
  Nicotinonitrile
  Pyridine-3-carbonitrile
  beta-Pyridyl Cyanide
  3-Azabenzonitrile
  3-Pyridinecarbonitrile
  pyridine-3-carbonitrile
  Lignoceric acid
  Carboxylic Acid C24
  Tetracosaoic acid
  tetracosanoic acid
  1-O-b-D-glucopyranosyl sinapate
  1-O-Sinapoyl-beta-D-glucose
  1-O-Sinapoyl beta-D
ATH63p08121 LinkIcon PT111810 LinkIcon 0.911
1-O-b-D-glucopyranosyl sinapate; MS2; Q-Tof; [M+H]+
   1-O-b-D-glucopyranosyl sinapate
  1-O-Sinapoyl-beta-D-glucose
  1-O-Sinapoyl beta-D-glucoside
  [(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl] (E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate
ATH64p07997 LinkIcon PS118104 LinkIcon 0.910
1-O-b-D-glucopyranosyl sinapate; MS2; QqQ; positive; CE 40 V
   1-O-b-D-glucopyranosyl sinapate
  1-O-Sinapoyl-beta-D-glucose
  1-O-Sinapoyl beta-D-glucoside
ATH11p06541 LinkIcon PT112580 LinkIcon 0.907
delta-Tocotrienol; MS2; Q-Tof; [M+H]+
   delta-Tocotrienol
  8-Methyltocotrienol
  (R)-delta-Tocotrienol
  (2R)-2,8-dimethyl-2-[(3E,7E)-4,8,12-trimethyltrideca-3,7,11-trienyl]chroman-6-ol
ATH64p07997 LinkIcon PS046902 LinkIcon 0.907
3-cyanopyridine; MS2; QqQ; positive; CE 20 V
   3-cyanopyridine
  3-Pyridinecarbonitrile
  Nicotinic acid nitrile
  Nicotinonitrile
  Pyridine-3-carbonitrile
  beta-Pyridyl Cyanide
  3-Azabenzonitrile
  3-Pyridinecarbonitrile
ATH14p06583 LinkIcon PT101453 LinkIcon 0.904
2'-Deoxycytidine-5'-diphosphate sodium salt; MS2; Q-Tof; [M+H]+
   2'-Deoxycytidine-5'-diphosphate sodium salt
ATH11p06541 LinkIcon PT112530 LinkIcon 0.903
Calciferol; MS2; Q-Tof; [M+H]+
   Calciferol
  Vitamin D2
  Ergocalciferol
  Viosterin
  Osteil
  Viosterol
  Ercalciol
  Irradiated ergosterol
  Condacaps
  Condocaps
  Condol
  Crtron
  Crystallina
  Daral
  (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol
  Davitin
  Deltalin
  Deratol
  Diactol
  Drisdol
  Ergorone
  Ertron
  Fortodyl
  Geltabs
  Hyperkil
  Irradiated ergosta-5,7,22-trien-3-beta-ol
  Metadee
ATH06p06165 LinkIcon PT101453 LinkIcon 0.900
2'-Deoxycytidine-5'-diphosphate sodium salt; MS2; Q-Tof; [M+H]+
   2'-Deoxycytidine-5'-diphosphate sodium salt
ATH08p06254 LinkIcon - -
-
ATH08p06593 LinkIcon - -
-
ATH09p06130 LinkIcon - -
-
ATH09p06376 LinkIcon - -
-
ATH09p06379 LinkIcon - -
-
ATH10p05683 LinkIcon - -
-
ATH11p05990 LinkIcon - -
-
ATH11p06537 LinkIcon - -
-
ATH12p05774 LinkIcon - -
-
ATH12p06262 LinkIcon - -
-
ATH14p07107 LinkIcon - -
-
ATH56p05889 LinkIcon - -
-
ATH56p06451 LinkIcon - -
-
ATH57p05584 LinkIcon - -
-
ATH57p05995 LinkIcon - -
-
ATH58p06718 LinkIcon - -
-
ATH58p07464 LinkIcon - -
-
ATH59p05794 LinkIcon - -
-
ATH59p06216 LinkIcon - -
-
ATH61p07533 LinkIcon - -
-
ATH61p08018 LinkIcon - -
-
ATH62p05969 LinkIcon - -
-
ATH63p06029 LinkIcon - -
-
ATH63p06556 LinkIcon - -
-
ATH63p07333 LinkIcon - -
-
ATH63p08124 LinkIcon - -
-
ATH64p07240 LinkIcon - -
-
ATH64p07493 LinkIcon - -
-
ATH64p08000 LinkIcon - -
-
2 adp012850 LinkIcon Positive ATH63p07850 LinkIcon PT101453 LinkIcon 0.916
2'-Deoxycytidine-5'-diphosphate sodium salt; MS2; Q-Tof; [M+H]+
   2'-Deoxycytidine-5'-diphosphate sodium salt
ATH07p05780 LinkIcon - -
-
ATH09p05960 LinkIcon - -
-
ATH11p06205 LinkIcon - -
-
ATH12p05965 LinkIcon - -
-
ATH56p06122 LinkIcon - -
-
ATH59p06347 LinkIcon - -
-
ATH61p07722 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g03590
Protein phosphatase 2C family protein - Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G03415.2); Has 5799 Blast hits to 5797 proteins in 294 species: Archae - 0; Bacteria - 4; Metazoa - 1418; Fungi - 691; Plants - 2505; Viruses - 5; Other Eukaryotes - 1176 (source: NCBI BLink).
2
at1g10570
Cysteine proteinases superfamily protein Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation. OVERLY TOLERANT TO SALT 2 (OTS2); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1D (TAIR:AT1G60220.1); Has 1265 Blast hits to 1250 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 616; Fungi - 251; Plants - 239; Viruses - 3; Other Eukaryotes - 156 (source: NCBI BLink).
3
at1g12730
GPI transamidase subunit PIG-U - GPI transamidase subunit PIG-U; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI transamidase subunit PIG-U (InterPro:IPR009600); BEST Arabidopsis thaliana protein match is: GPI transamidase subunit PIG-U (TAIR:AT1G63110.1); Has 339 Blast hits to 333 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 121; Plants - 55; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
4
at1g22210
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-6-phosphate phosphatase (TAIR:AT1G78090.1); Has 2333 Blast hits to 2328 proteins in 832 species: Archae - 41; Bacteria - 1319; Metazoa - 218; Fungi - 151; Plants - 473; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).
5
at1g29550
Eukaryotic initiation factor 4E protein - Eukaryotic initiation factor 4E protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytoplasm; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: Eukaryotic initiation factor 4E protein (TAIR:AT1G29590.1); Has 1782 Blast hits to 1782 proteins in 275 species: Archae - 0; Bacteria - 0; Metazoa - 729; Fungi - 345; Plants - 383; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink).
6
at1g29590
Eukaryotic initiation factor 4E protein - eukaryotic translation Initiation Factor 4E3 (eIF4E3); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: Eukaryotic initiation factor 4E protein (TAIR:AT1G29550.1); Has 1771 Blast hits to 1771 proteins in 275 species: Archae - 0; Bacteria - 0; Metazoa - 729; Fungi - 347; Plants - 383; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink).
7
at1g49530
geranylgeranyl pyrophosphate synthase 6 encodes a mitochondria-targeted geranylgeranyl pyrophosphate synthase geranylgeranyl pyrophosphate synthase 6 (GGPS6); CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT3G20160.1); Has 16450 Blast hits to 16445 proteins in 2927 species: Archae - 341; Bacteria - 9363; Metazoa - 273; Fungi - 440; Plants - 451; Viruses - 12; Other Eukaryotes - 5570 (source: NCBI BLink).
8
at1g49560
Homeodomain-like superfamily protein - Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 1610 Blast hits to 1602 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1585; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
9
at1g50340
Plant invertase/pectin methylesterase inhibitor superfamily protein - Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: central cell, embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G50325.1); Has 63 Blast hits to 62 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
10
at1g67080
abscisic acid (aba)-deficient 4 Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein. abscisic acid (ABA)-deficient 4 (ABA4); INVOLVED IN: abscisic acid biosynthetic process, regulation of superoxide anion generation, xanthophyll metabolic process, photoprotection; LOCATED IN: PSII associated light-harvesting complex II, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 723 Blast hits to 723 proteins in 64 species: Archae - 0; Bacteria - 78; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink).
11
at2g04020
GDSL-like Lipase/Acylhydrolase superfamily protein - GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: N-terminal protein myristoylation, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G03980.1); Has 2770 Blast hits to 2748 proteins in 64 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 2; Plants - 2755; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
12
at2g31830
endonuclease/exonuclease/phosphatase family protein - endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol or phosphatidylinositol phosphatase activity; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 2284 Blast hits to 2227 proteins in 249 species: Archae - 0; Bacteria - 34; Metazoa - 850; Fungi - 543; Plants - 566; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink).
13
at3g23325
Splicing factor 3B subunit 5/RDS3 complex subunit 10 - Splicing factor 3B subunit 5/RDS3 complex subunit 10; CONTAINS InterPro DOMAIN/s: Splicing factor 3B subunit 5/RDS3 complex subunit 10 (InterPro:IPR009846), Splicing factor 3B, subunit 5 (InterPro:IPR017089); BEST Arabidopsis thaliana protein match is: Splicing factor 3B subunit 5/RDS3 complex subunit 10 (TAIR:AT4G14342.1); Has 334 Blast hits to 334 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 97; Plants - 62; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
14
at3g53570
FUS3-complementing gene 1 a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast. FUS3-complementing gene 1 (FC1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 2 (TAIR:AT4G24740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
15
at3g56960
phosphatidyl inositol monophosphate 5 kinase 4 Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology. phosphatidyl inositol monophosphate 5 kinase 4 (PIP5K4); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol- 4-phosphate 5-kinase 5 (TAIR:AT2G41210.1); Has 27454 Blast hits to 7705 proteins in 602 species: Archae - 2; Bacteria - 4208; Metazoa - 4073; Fungi - 443; Plants - 2320; Viruses - 0; Other Eukaryotes - 16408 (source: NCBI BLink).
16
at3g60010
SKP1-like 13 - SKP1-like 13 (SK13); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 11 (TAIR:AT4G34210.1); Has 1418 Blast hits to 1414 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 525; Fungi - 176; Plants - 537; Viruses - 11; Other Eukaryotes - 169 (source: NCBI BLink).
17
at5g15100
Auxin efflux carrier family protein - PIN-FORMED 8 (PIN8); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G16530.1); Has 2836 Blast hits to 2583 proteins in 784 species: Archae - 43; Bacteria - 1603; Metazoa - 103; Fungi - 0; Plants - 634; Viruses - 0; Other Eukaryotes - 453 (source: NCBI BLink).
18
at5g50870
ubiquitin-conjugating enzyme 27 - ubiquitin-conjugating enzyme 27 (UBC27); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 8 (TAIR:AT5G41700.4); Has 10156 Blast hits to 10152 proteins in 398 species: Archae - 0; Bacteria - 2; Metazoa - 4517; Fungi - 2174; Plants - 1846; Viruses - 24; Other Eukaryotes - 1593 (source: NCBI BLink).
19
at5g59800
methyl-CPG-binding domain 7 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. Interacts with arginine methyltransferase 11. (AtPRMT11 methyl-CPG-binding domain 7 (MBD7); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
20
at5g65000
Nucleotide-sugar transporter family protein - Nucleotide-sugar transporter family protein; FUNCTIONS IN: nucleotide-sugar transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, nucleotide-sugar transport; LOCATED IN: integral to membrane, Golgi membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-sugar transporter (InterPro:IPR007271), UDP/CMP-sugar transporter (InterPro:IPR021189); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT4G35335.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
21
at5g66350
Lateral root primordium (LRP) protein-related A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid. SHORT INTERNODES (SHI); CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit