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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 15 " Y:" 16 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn033191 LinkIcon Negative ATH10n04370 LinkIcon PM018029 LinkIcon 1.000
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH11n03986 LinkIcon PM018009 LinkIcon 0.997
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH10n04852 LinkIcon PM018009 LinkIcon 0.996
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
PM018029 LinkIcon 0.995
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH13n06899 LinkIcon PM018009 LinkIcon 0.995
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH10n04370 LinkIcon PM018009 LinkIcon 0.993
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH11n03550 LinkIcon PM018009 LinkIcon 0.993
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
PM018029 LinkIcon 0.991
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH11n03986 LinkIcon PM018029 LinkIcon 0.987
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH13n06896 LinkIcon PM018009 LinkIcon 0.987
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH09n07817 LinkIcon PM018009 LinkIcon 0.985
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH12n03486 LinkIcon PM018009 LinkIcon 0.982
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH13n06899 LinkIcon PM018029 LinkIcon 0.981
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH13n06896 LinkIcon PM018029 LinkIcon 0.980
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH13n06000 LinkIcon PM018029 LinkIcon 0.978
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH09n07817 LinkIcon PM018029 LinkIcon 0.977
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH13n05745 LinkIcon PM018009 LinkIcon 0.974
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH13n06000 LinkIcon PM018009 LinkIcon 0.970
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH12n03486 LinkIcon PM018029 LinkIcon 0.966
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH56n07853 LinkIcon PM018009 LinkIcon 0.959
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH13n05745 LinkIcon PM018029 LinkIcon 0.949
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH63n08196 LinkIcon PM018009 LinkIcon 0.949
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH56n07853 LinkIcon PM018029 LinkIcon 0.944
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH57n08104 LinkIcon PM018009 LinkIcon 0.942
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH06n03704 LinkIcon PM018029 LinkIcon 0.940
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH57n08605 LinkIcon PM018009 LinkIcon 0.939
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH63n07438 LinkIcon PM018009 LinkIcon 0.939
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH63n08199 LinkIcon PM018009 LinkIcon 0.939
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH57n08104 LinkIcon PM018029 LinkIcon 0.936
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH06n04245 LinkIcon PM018009 LinkIcon 0.933
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH59n08540 LinkIcon PM018009 LinkIcon 0.931
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
PM018029 LinkIcon 0.925
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH63n08196 LinkIcon PM018029 LinkIcon 0.924
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH06n03704 LinkIcon PM018009 LinkIcon 0.921
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH63n08199 LinkIcon PM018029 LinkIcon 0.915
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH58n08988 LinkIcon PM018009 LinkIcon 0.914
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH63n07438 LinkIcon PM018029 LinkIcon 0.914
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH14n05948 LinkIcon PM018029 LinkIcon 0.910
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH57n08605 LinkIcon PM018029 LinkIcon 0.910
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH07n04648 LinkIcon PM018029 LinkIcon 0.907
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH14n05948 LinkIcon PM018009 LinkIcon 0.907
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH60n07943 LinkIcon PM018009 LinkIcon 0.906
5-Methylsulfinyl-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylsulfinyl-n-pentyl glucosinolate
  glucoalyssin
ATH07n04067 LinkIcon - -
-
ATH12n03388 LinkIcon - -
-
ATH14n06519 LinkIcon - -
-
ATH56n08864 LinkIcon - -
-
ATH58n08989 LinkIcon - -
-
ATH60n08685 LinkIcon - -
-
ATH61n06746 LinkIcon - -
-
ATH62n07545 LinkIcon - -
-
ATH62n07781 LinkIcon - -
-
2 adn047542 LinkIcon Negative ATH06n07235 LinkIcon - -
-
ATH07n08211 LinkIcon - -
-
ATH10n07478 LinkIcon - -
-
ATH11n06898 LinkIcon - -
-
ATH11n07028 LinkIcon - -
-
ATH14n09554 LinkIcon - -
-
ATH14n09694 LinkIcon - -
-
ATH59n12853 LinkIcon - -
-
ATH60n11995 LinkIcon - -
-
ATH60n12698 LinkIcon - -
-
ATH61n11634 LinkIcon - -
-
ATH64n12075 LinkIcon - -
-
3 adp018768 LinkIcon Positive ATH63p08290 LinkIcon PS102501 LinkIcon 0.968
Glycocyamine; MS2; QqQ; positive; CE 10 V
   Glycocyamine
  Guanidineacetic acid
  Guanidoacetate
  Guanidinoacetate
  N-Amidinoglycine
  N-Amidinoglycine
  N-Guanylglycine
  Betacyamine
  Betasyamine
  Glykocyamin
PS107405 LinkIcon 0.958
3-(Methylsulfinyl)propylglucosinolate; MS2; QqQ; positive; CE 50 V
   3-(Methylsulfinyl)propylglucosinolate
  Glucoiberin
  3-Methylsulfinylpropyl glucosinolate
  beta-D-Glucopyranose,1-thio-,1-(4-(methylsulfinyl)-N-(sulfooxy)butanimidate)
PS107404 LinkIcon 0.927
3-(Methylsulfinyl)propylglucosinolate; MS2; QqQ; positive; CE 40 V
   3-(Methylsulfinyl)propylglucosinolate
  Glucoiberin
  3-Methylsulfinylpropyl glucosinolate
  beta-D-Glucopyranose,1-thio-,1-(4-(methylsulfinyl)-N-(sulfooxy)butanimidate)
PS009102 LinkIcon 0.911
Indole-3-carboxyaldehyde; MS2; QqQ; positive; CE 20 V
   Indole-3-carboxyaldehyde
  Indole-3-aldehyde
  3-Formylindole
  1H-indole-3-carbaldehyde
  beta-Indolylaldehyde
  Indole-3-carboxaldehyde
ATH06p08143 LinkIcon - -
-
ATH06p08260 LinkIcon - -
-
ATH06p08759 LinkIcon - -
-
ATH07p07323 LinkIcon - -
-
ATH07p07741 LinkIcon - -
-
ATH08p08758 LinkIcon - -
-
ATH08p09009 LinkIcon - -
-
ATH09p07891 LinkIcon - -
-
ATH09p08171 LinkIcon - -
-
ATH10p07422 LinkIcon - -
-
ATH10p07517 LinkIcon - -
-
ATH11p08134 LinkIcon - -
-
ATH11p08635 LinkIcon - -
-
ATH12p07461 LinkIcon - -
-
ATH12p07860 LinkIcon - -
-
ATH14p09142 LinkIcon - -
-
ATH57p07576 LinkIcon - -
-
ATH57p07738 LinkIcon - -
-
ATH57p08201 LinkIcon - -
-
ATH58p09980 LinkIcon - -
-
ATH58p10470 LinkIcon - -
-
ATH59p07858 LinkIcon - -
-
ATH59p08190 LinkIcon - -
-
ATH61p09500 LinkIcon - -
-
ATH61p10626 LinkIcon - -
-
ATH62p07183 LinkIcon - -
-
ATH62p07746 LinkIcon - -
-
ATH63p08694 LinkIcon - -
-
ATH63p08697 LinkIcon - -
-
ATH63p10852 LinkIcon - -
-
ATH64p10146 LinkIcon - -
-
ATH64p10854 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g18440
Peptidyl-tRNA hydrolase family protein - Peptidyl-tRNA hydrolase family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, conserved site (InterPro:IPR018171), Peptidyl-tRNA hydrolase (InterPro:IPR001328); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase family protein (TAIR:AT5G16140.2); Has 8043 Blast hits to 8040 proteins in 2597 species: Archae - 0; Bacteria - 5299; Metazoa - 47; Fungi - 102; Plants - 126; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink).
2
at1g54220
Dihydrolipoamide acetyltransferase, long form protein - Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process, acetyl-CoA biosynthetic process from pyruvate; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT3G13930.1); Has 21519 Blast hits to 19723 proteins in 2310 species: Archae - 104; Bacteria - 12081; Metazoa - 737; Fungi - 478; Plants - 377; Viruses - 0; Other Eukaryotes - 7742 (source: NCBI BLink).
3
at1g58080
ATP phosphoribosyl transferase 1 ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis ATP phosphoribosyl transferase 1 (ATP-PRT1); FUNCTIONS IN: ATP phosphoribosyltransferase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine biosynthesis HisG: ATP phosphoribosyltransferase (InterPro:IPR001348), ATP phosphoribosyltransferase, conserved site (InterPro:IPR018198), ATP phosphoribosyltransferase, catalytic domain (InterPro:IPR013820), Histidine biosynthesis HisG, C-terminal (InterPro:IPR013115), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); BEST Arabidopsis thaliana protein match is: ATP phosphoribosyl transferase 2 (TAIR:AT1G09795.1); Has 6414 Blast hits to 6414 proteins in 2199 species: Archae - 208; Bacteria - 4137; Metazoa - 2; Fungi - 141; Plants - 73; Viruses - 0; Other Eukaryotes - 1853 (source: NCBI BLink).
4
at1g79440
aldehyde dehydrogenase 5F1 Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH). Nomenclature according to Kirch, et al (2004). aldehyde dehydrogenase 5F1 (ALDH5F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, NAD or NADH binding, copper ion binding, succinate-semialdehyde dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: mitochondrion, chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Succinic semialdehyde dehydrogenase (InterPro:IPR010102); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62487 Blast hits to 62143 proteins in 3037 species: Archae - 481; Bacteria - 36218; Metazoa - 2614; Fungi - 2131; Plants - 1502; Viruses - 0; Other Eukaryotes - 19541 (source: NCBI BLink).
5
at1g80380
P-loop containing nucleoside triphosphate hydrolases superfamily protein encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle. P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: glycerate kinase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
6
at2g47390
Prolyl oligopeptidase family protein - Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 4880 Blast hits to 4877 proteins in 846 species: Archae - 179; Bacteria - 3027; Metazoa - 477; Fungi - 49; Plants - 145; Viruses - 0; Other Eukaryotes - 1003 (source: NCBI BLink).
7
at3g05800
AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 - AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 (AIF1); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G09250.1); Has 150 Blast hits to 150 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
8
at3g16240
delta tonoplast integral protein Delta tonoplast intrinsic protein, functions as a water channel and ammonium (NH3) transporter. Highly expressed in flower, shoot, and stem. Expression shows diurnal regulation and is induced by ammonium (NH3). Protein localized to vacuolar membrane. delta tonoplast integral protein (DELTA-TIP); FUNCTIONS IN: water channel activity, ammonia transmembrane transporter activity, urea transmembrane transporter activity, methylammonium transmembrane transporter activity; INVOLVED IN: transport, urea transport, water transport; LOCATED IN: in 10 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2;3 (TAIR:AT5G47450.1); Has 10937 Blast hits to 10900 proteins in 2182 species: Archae - 87; Bacteria - 5160; Metazoa - 1503; Fungi - 423; Plants - 2497; Viruses - 0; Other Eukaryotes - 1267 (source: NCBI BLink).
9
at3g25530
glyoxylate reductase 1 Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH). Contains a NADP-binding domain. GHBDH is proposed to function in oxidative stress tolerance. glyoxylate reductase 1 (GLYR1); FUNCTIONS IN: 3-hydroxybutyrate dehydrogenase activity, phosphogluconate dehydrogenase (decarboxylating) activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 2 (TAIR:AT1G17650.1); Has 17561 Blast hits to 17531 proteins in 2324 species: Archae - 147; Bacteria - 10853; Metazoa - 400; Fungi - 503; Plants - 354; Viruses - 5; Other Eukaryotes - 5299 (source: NCBI BLink).
10
at4g05090
Inositol monophosphatase family protein - Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 5084 Blast hits to 5082 proteins in 1369 species: Archae - 38; Bacteria - 2832; Metazoa - 92; Fungi - 221; Plants - 243; Viruses - 0; Other Eukaryotes - 1658 (source: NCBI BLink).
11
at4g12420
Cupredoxin superfamily protein Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues. SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1); Has 6156 Blast hits to 6132 proteins in 1213 species: Archae - 8; Bacteria - 2095; Metazoa - 284; Fungi - 2301; Plants - 1268; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink).
12
at4g14360
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
13
at4g18460
D-Tyr-tRNA(Tyr) deacylase family protein - D-Tyr-tRNA(Tyr) deacylase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: D-amino acid catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-tyrosyl-tRNA(Tyr) deacylase (InterPro:IPR003732); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
14
at4g31050
Biotin/lipoate A/B protein ligase family - Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: lipoyltransferase activity, octanoyltransferase activity, catalytic activity; INVOLVED IN: protein modification process, lipoate biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octanoyltransferase, conserved site (InterPro:IPR020605), Octanoyltransferase (InterPro:IPR000544), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT1G47578.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
15
at4g34650
squalene synthase 2 Encodes a protein with similarity to squalene synthase which catalyzes the first committed step in sterol biosynthesis. To date no experimental evidence exists that SQS2 functions as a squalene synthase and some experiments indicate it does not have this function. squalene synthase 2 (SQS2); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: N-terminal protein myristoylation, sterol biosynthetic process; LOCATED IN: integral to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 1 (TAIR:AT4G34640.1); Has 1176 Blast hits to 1175 proteins in 496 species: Archae - 34; Bacteria - 579; Metazoa - 114; Fungi - 168; Plants - 163; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).
16
at4g37670
N-acetyl-l-glutamate synthase 2 - N-acetyl-l-glutamate synthase 2 (NAGS2); FUNCTIONS IN: acetyl-CoA:L-glutamate N-acetyltransferase activity, N-acetyltransferase activity; INVOLVED IN: cellular amino acid biosynthetic process, arginine biosynthetic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Amino-acid N-acetyltransferase (ArgA) (InterPro:IPR010167); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 1 (TAIR:AT2G22910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
17
at5g07860
HXXXD-type acyl-transferase family protein - HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G07870.1); Has 2502 Blast hits to 2496 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 108; Plants - 2386; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
18
at5g11590
Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. TINY2 (TINY2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, hypocotyl, leaf; EXPRESSED DURING: LP.10 ten leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
19
at5g47435
formyltetrahydrofolate deformylase, putative encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. formyltetrahydrofolate deformylase, putative; FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity; INVOLVED IN: tetrahydrofolate metabolic process, purine ribonucleotide biosynthetic process, biosynthetic process, photorespiration; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formyltetrahydrofolate deformylase (InterPro:IPR004810), Formyl transferase, N-terminal (InterPro:IPR002376); BEST Arabidopsis thaliana protein match is: Formyl transferase (TAIR:AT4G17360.1); Has 14552 Blast hits to 14552 proteins in 2615 species: Archae - 121; Bacteria - 10332; Metazoa - 171; Fungi - 86; Plants - 154; Viruses - 3; Other Eukaryotes - 3685 (source: NCBI BLink).
20
at5g57850
D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein - D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: 4-amino-4-deoxychorismate lyase activity, catalytic activity; INVOLVED IN: tetrahydrofolate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
21
at5g63980
Inositol monophosphatase family protein Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity. SAL1; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, nucleotide phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: in 15 processes; LOCATED IN: nucleus, chloroplast, chloroplast stroma, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 8292 Blast hits to 8290 proteins in 1695 species: Archae - 42; Bacteria - 5356; Metazoa - 208; Fungi - 241; Plants - 302; Viruses - 0; Other Eukaryotes - 2143 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit