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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Keyword
AGI locus IDs

Choosing cell X:" 16 " Y:" 2 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn035352 LinkIcon Negative ATH07n05259 LinkIcon PM018023 LinkIcon 1.000
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH08n08224 LinkIcon PM018023 LinkIcon 1.000
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH10n05261 LinkIcon PM018023 LinkIcon 1.000
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH07n04650 LinkIcon PM018023 LinkIcon 0.999
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH14n07154 LinkIcon PM018023 LinkIcon 0.999
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH06n05156 LinkIcon PM018023 LinkIcon 0.998
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH11n03770 LinkIcon PM018023 LinkIcon 0.998
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH11n04525 LinkIcon PM018023 LinkIcon 0.998
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH09n08266 LinkIcon PM018023 LinkIcon 0.997
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH13n06667 LinkIcon PM018023 LinkIcon 0.997
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH10n05505 LinkIcon PM018023 LinkIcon 0.987
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH09n07365 LinkIcon PM018023 LinkIcon 0.986
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH10n05044 LinkIcon PM018023 LinkIcon 0.986
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH14n06285 LinkIcon PM018023 LinkIcon 0.979
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH13n07363 LinkIcon PM018023 LinkIcon 0.970
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH56n09128 LinkIcon PM018023 LinkIcon 0.945
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH58n09257 LinkIcon PM018023 LinkIcon 0.945
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH64n09132 LinkIcon PM018023 LinkIcon 0.937
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH62n07786 LinkIcon PM018023 LinkIcon 0.936
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH10n05505 LinkIcon PM009635 LinkIcon 0.934
Isorhamnetin 3-glucoside-7-glucoside; MS2; QIT; M-H; 0.3->2V
   Isorhamnetin 3-glucoside-7-glucoside
PM009805 LinkIcon 0.933
Isorhamnetin 3,7-di-O-glucoside; MS2; QIT; M-H; 35
   Isorhamnetin 3,7-di-O-glucoside
  Isorhamnetin-3,7-diglucoside
ATH14n06281 LinkIcon PM018023 LinkIcon 0.931
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH62n08518 LinkIcon PM018023 LinkIcon 0.930
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH10n05505 LinkIcon PM002514 LinkIcon 0.925
Isorhamnetin-3,7-diglucoside; MS2; QIT; M-H; 0.3->2V
   Isorhamnetin-3,7-diglucoside
ATH11n03770 LinkIcon PM009635 LinkIcon 0.923
Isorhamnetin 3-glucoside-7-glucoside; MS2; QIT; M-H; 0.3->2V
   Isorhamnetin 3-glucoside-7-glucoside
ATH14n06281 LinkIcon PM018021 LinkIcon 0.923
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH58n08484 LinkIcon PM018023 LinkIcon 0.923
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH11n03770 LinkIcon PM009805 LinkIcon 0.922
Isorhamnetin 3,7-di-O-glucoside; MS2; QIT; M-H; 35
   Isorhamnetin 3,7-di-O-glucoside
  Isorhamnetin-3,7-diglucoside
ATH07n04650 LinkIcon PM009635 LinkIcon 0.919
Isorhamnetin 3-glucoside-7-glucoside; MS2; QIT; M-H; 0.3->2V
   Isorhamnetin 3-glucoside-7-glucoside
PM009805 LinkIcon 0.918
Isorhamnetin 3,7-di-O-glucoside; MS2; QIT; M-H; 35
   Isorhamnetin 3,7-di-O-glucoside
  Isorhamnetin-3,7-diglucoside
ATH11n04525 LinkIcon PM009635 LinkIcon 0.918
Isorhamnetin 3-glucoside-7-glucoside; MS2; QIT; M-H; 0.3->2V
   Isorhamnetin 3-glucoside-7-glucoside
PM016303 LinkIcon 0.917
Isorhamnetin-3,7-diglucoside; MS2; QIT; M-H; 35V
   Isorhamnetin-3,7-diglucoside
  Isorhamnetin 3,7-di-O-glucoside
ATH14n06909 LinkIcon PS107910 LinkIcon 0.916
Gluconasturtiin; MS2; QqQ; negative; CE 40 V
   Gluconasturtiin
  Gluconasturcin
  2-Phenethylglucosinolate
ATH11n03770 LinkIcon PM002514 LinkIcon 0.914
Isorhamnetin-3,7-diglucoside; MS2; QIT; M-H; 0.3->2V
   Isorhamnetin-3,7-diglucoside
ATH10n05505 LinkIcon PS093307 LinkIcon 0.913
Quercetin-3-Glucuronide; MS2; QqQ; negative; CE 10 V
   Quercetin-3-Glucuronide
  Quer-3-GlcA
  Miquelianin
  Querciturone
ATH61n08189 LinkIcon PM018021 LinkIcon 0.913
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH14n06909 LinkIcon PS108211 LinkIcon 0.912
(2R)-2-Hydroxy-2-phenethylglucosinolate; MS2; QqQ; negative; CE 50 V
   (2R)-2-Hydroxy-2-phenethylglucosinolate
  Glucosibarin
ATH07n04650 LinkIcon PM002514 LinkIcon 0.911
Isorhamnetin-3,7-diglucoside; MS2; QIT; M-H; 0.3->2V
   Isorhamnetin-3,7-diglucoside
ATH11n04525 LinkIcon PM002514 LinkIcon 0.910
Isorhamnetin-3,7-diglucoside; MS2; QIT; M-H; 0.3->2V
   Isorhamnetin-3,7-diglucoside
ATH07n05259 LinkIcon PM009635 LinkIcon 0.906
Isorhamnetin 3-glucoside-7-glucoside; MS2; QIT; M-H; 0.3->2V
   Isorhamnetin 3-glucoside-7-glucoside
ATH10n05261 LinkIcon PM009635 LinkIcon 0.906
Isorhamnetin 3-glucoside-7-glucoside; MS2; QIT; M-H; 0.3->2V
   Isorhamnetin 3-glucoside-7-glucoside
ATH07n05259 LinkIcon PM009805 LinkIcon 0.905
Isorhamnetin 3,7-di-O-glucoside; MS2; QIT; M-H; 35
   Isorhamnetin 3,7-di-O-glucoside
  Isorhamnetin-3,7-diglucoside
ATH10n05261 LinkIcon PM009805 LinkIcon 0.905
Isorhamnetin 3,7-di-O-glucoside; MS2; QIT; M-H; 35
   Isorhamnetin 3,7-di-O-glucoside
  Isorhamnetin-3,7-diglucoside
ATH14n06909 LinkIcon PS050812 LinkIcon 0.905
4-methylthiobutyl glucosinolate; MS2; QqQ; negative; CE 60 V
   4-methylthiobutyl glucosinolate
  4MTB
  Glucoerucin
  4-(Methylthio)butylglucosinolate
ATH59n08296 LinkIcon PS107910 LinkIcon 0.904
Gluconasturtiin; MS2; QqQ; negative; CE 40 V
   Gluconasturtiin
  Gluconasturcin
  2-Phenethylglucosinolate
ATH10n05505 LinkIcon PS041907 LinkIcon 0.903
isorhamnetin-3-O-glucoside; MS2; QqQ; negative; CE 10 V
   isorhamnetin-3-O-glucoside
  Isor-3-Glc
  Isorhamnetin-3-beta-D-galactopyranoside
ATH11n03770 LinkIcon PS093307 LinkIcon 0.903
Quercetin-3-Glucuronide; MS2; QqQ; negative; CE 10 V
   Quercetin-3-Glucuronide
  Quer-3-GlcA
  Miquelianin
  Querciturone
ATH14n06909 LinkIcon PS108210 LinkIcon 0.903
(2R)-2-Hydroxy-2-phenethylglucosinolate; MS2; QqQ; negative; CE 40 V
   (2R)-2-Hydroxy-2-phenethylglucosinolate
  Glucosibarin
ATH61n07465 LinkIcon PM018021 LinkIcon 0.903
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH62n08989 LinkIcon PM018021 LinkIcon 0.901
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH06n05156 LinkIcon PM009805 LinkIcon 0.900
Isorhamnetin 3,7-di-O-glucoside; MS2; QIT; M-H; 35
   Isorhamnetin 3,7-di-O-glucoside
  Isorhamnetin-3,7-diglucoside
  Isorhamnetin 3-glucoside-7-glucoside
ATH57n09096 LinkIcon PM018021 LinkIcon 0.900
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH11n04153 LinkIcon - -
-
ATH11n04708 LinkIcon - -
-
ATH12n03491 LinkIcon - -
-
ATH12n03976 LinkIcon - -
-
ATH56n08362 LinkIcon - -
-
ATH57n08351 LinkIcon - -
-
ATH57n09351 LinkIcon - -
-
ATH58n09765 LinkIcon - -
-
ATH59n08782 LinkIcon - -
-
ATH59n09036 LinkIcon - -
-
ATH59n09528 LinkIcon - -
-
ATH60n08193 LinkIcon - -
-
ATH60n08196 LinkIcon - -
-
ATH60n09187 LinkIcon - -
-
ATH60n09409 LinkIcon - -
-
ATH61n07470 LinkIcon - -
-
ATH61n08447 LinkIcon - -
-
ATH62n07783 LinkIcon - -
-
ATH63n08715 LinkIcon - -
-
ATH64n07901 LinkIcon - -
-
ATH64n08397 LinkIcon - -
-
ATH64n08637 LinkIcon - -
-
2 adp001968 LinkIcon Positive ATH06p02156 LinkIcon - -
-
ATH07p01363 LinkIcon - -
-
ATH07p01629 LinkIcon - -
-
ATH09p00838 LinkIcon - -
-
ATH09p01642 LinkIcon - -
-
ATH10p01361 LinkIcon - -
-
ATH10p01894 LinkIcon - -
-
ATH10p02145 LinkIcon - -
-
ATH11p01908 LinkIcon - -
-
ATH11p02169 LinkIcon - -
-
ATH12p01084 LinkIcon - -
-
ATH12p01885 LinkIcon - -
-
ATH13p01099 LinkIcon - -
-
ATH13p01901 LinkIcon - -
-
ATH14p00835 LinkIcon - -
-
ATH14p01639 LinkIcon - -
-
ATH57p01139 LinkIcon - -
-
ATH57p01677 LinkIcon - -
-
ATH59p01405 LinkIcon - -
-
ATH59p01675 LinkIcon - -
-
ATH61p02998 LinkIcon - -
-
ATH62p01405 LinkIcon - -
-
ATH62p01674 LinkIcon - -
-
ATH63p00859 LinkIcon - -
-
ATH63p01403 LinkIcon - -
-
ATH63p01935 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g01340
cyclic nucleotide gated channel 10 member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 10 (CNGC10); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 13 (TAIR:AT4G01010.1); Has 3364 Blast hits to 3209 proteins in 253 species: Archae - 0; Bacteria - 35; Metazoa - 1554; Fungi - 48; Plants - 1027; Viruses - 0; Other Eukaryotes - 700 (source: NCBI BLink).
2
at1g04040
HAD superfamily, subfamily IIIB acid phosphatase - HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT5G44020.1); Has 1079 Blast hits to 1077 proteins in 335 species: Archae - 0; Bacteria - 592; Metazoa - 2; Fungi - 0; Plants - 364; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink).
3
at1g27130
glutathione S-transferase tau 13 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase tau 13 (GSTU13); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 14 (TAIR:AT1G27140.1); Has 5143 Blast hits to 5126 proteins in 847 species: Archae - 0; Bacteria - 2240; Metazoa - 360; Fungi - 99; Plants - 1972; Viruses - 0; Other Eukaryotes - 472 (source: NCBI BLink).
4
at1g72360
Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 (HRE1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G47520.1); Has 6115 Blast hits to 5780 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6076; Viruses - 2; Other Eukaryotes - 37 (source: NCBI BLink).
5
at2g02020
Major facilitator superfamily protein - Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 2 (TAIR:AT2G02040.1); Has 8051 Blast hits to 7680 proteins in 1472 species: Archae - 0; Bacteria - 4049; Metazoa - 790; Fungi - 469; Plants - 2161; Viruses - 0; Other Eukaryotes - 582 (source: NCBI BLink).
6
at2g17820
histidine kinase 1 Encodes a member of the histidine kinase family. histidine kinase 1 (HK1); FUNCTIONS IN: osmosensor activity, protein histidine kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: response to water deprivation, seed maturation, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase (TAIR:AT2G47430.1); Has 149976 Blast hits to 132540 proteins in 3044 species: Archae - 792; Bacteria - 133304; Metazoa - 35; Fungi - 2288; Plants - 2106; Viruses - 27; Other Eukaryotes - 11424 (source: NCBI BLink).
7
at2g39180
CRINKLY4 related 2 - CRINKLY4 related 2 (CCR2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, receptor activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 1 (TAIR:AT3G09780.1); Has 94842 Blast hits to 93551 proteins in 4006 species: Archae - 70; Bacteria - 8434; Metazoa - 36115; Fungi - 7540; Plants - 29604; Viruses - 210; Other Eukaryotes - 12869 (source: NCBI BLink).
8
at2g41110
calmodulin 2 Encodes a touch-inducible calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6. calmodulin 2 (CAM2); FUNCTIONS IN: protein binding, calcium ion binding; INVOLVED IN: pollen germination, protein catabolic process; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3); Has 34068 Blast hits to 23201 proteins in 1763 species: Archae - 4; Bacteria - 227; Metazoa - 14490; Fungi - 7344; Plants - 6998; Viruses - 0; Other Eukaryotes - 5005 (source: NCBI BLink).
9
at3g57230
AGAMOUS-like 16 MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes. AGAMOUS-like 16 (AGL16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1); Has 7328 Blast hits to 7327 proteins in 923 species: Archae - 0; Bacteria - 10; Metazoa - 652; Fungi - 320; Plants - 6229; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).
10
at5g10170
myo-inositol-1-phosphate synthase 3 myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization. myo-inositol-1-phosphate synthase 3 (MIPS3); FUNCTIONS IN: binding, inositol-3-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, inositol biosynthetic process, phospholipid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myo-inositol-1-phosphate synthase (InterPro:IPR002587), Myo-inositol-1-phosphate synthase, GAPDH-like (InterPro:IPR013021), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: myo-inositol-1-phosphate synthase 2 (TAIR:AT2G22240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
11
at5g15830
basic leucine-zipper 3 - basic leucine-zipper 3 (bZIP3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 42 (TAIR:AT3G30530.1); Has 1902 Blast hits to 1888 proteins in 142 species: Archae - 0; Bacteria - 8; Metazoa - 75; Fungi - 43; Plants - 1592; Viruses - 0; Other Eukaryotes - 184 (source: NCBI BLink).
12
at5g18170
glutamate dehydrogenase 1 Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. glutamate dehydrogenase 1 (GDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to salt stress, nitrogen compound metabolic process, response to absence of light; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate dehydrogenase (InterPro:IPR014362), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
13
at5g59680
Leucine-rich repeat protein kinase family protein - Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit