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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 18 " Y:" 1 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn053908 LinkIcon Negative ATH06n08160 LinkIcon - -
-
ATH08n11624 LinkIcon - -
-
ATH08n12180 LinkIcon - -
-
ATH09n11948 LinkIcon - -
-
ATH56n13547 LinkIcon - -
-
ATH56n14280 LinkIcon - -
-
ATH58n13827 LinkIcon - -
-
ATH58n14833 LinkIcon - -
-
ATH59n14600 LinkIcon - -
-
ATH61n12919 LinkIcon - -
-
ATH61n13152 LinkIcon - -
-
ATH61n13402 LinkIcon - -
-
ATH63n13517 LinkIcon - -
-
2 adp007458 LinkIcon Positive ATH64p04267 LinkIcon PS087601 LinkIcon 0.975
cis-Nerolidol; MS2; QqQ; positive; CE 10 V
   cis-Nerolidol
  (6Z)-3,7,11-trimethyl-1,6,10-dodecatrien-3-ol
  cis-3,7,11-Trimethyldodeca-1,6,10-trien-3-ol
PS018701 LinkIcon 0.974
Cystathionine; MS2; QqQ; positive; CE 10 V
   Cystathionine
  DL,DL-allo-Cystathionine
  S-(2-Amino-2-carboxyethyl)homocysteine
PS087701 LinkIcon 0.973
alpha-bisabolol; MS2; QqQ; positive; CE 10 V
   alpha-bisabolol
  dragosantol
  Levomenol
  6-methyl-2-(4-methyl-3-cyclohexen-1-yl)-5-hepten-2-ol
  Bisabola-1,12-dien-8-ol
PT101870 LinkIcon 0.972
Cystathionine; MS2; Q-Tof; [M+H]+
   Cystathionine
  DL,DL-allo-Cystathionine
  S-(2-Amino-2-carboxyethyl)homocysteine
  2-amino-4-(2-amino-3-hydroxy-3-oxopropyl)sulfanylbutanoic acid
PS066501 LinkIcon 0.969
L(+)-Cystathionine; MS2; QqQ; positive; CE 10 V
   L(+)-Cystathionine
  (R)-S-(2-Amino-2-carboxyethyl)-L-homocysteine
  S-(beta-Amino-beta-carboxyethyl)homocysteine
PS113001 LinkIcon 0.964
cerulenin; MS2; QqQ; positive; CE 10 V
   cerulenin
  Helicocerin
  (2R,3S,E,E)-2,3-Epoxy-4-oxo-7,10-dodecadienamide
ATH63p04094 LinkIcon PS061701 LinkIcon 0.922
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH06p04586 LinkIcon - -
-
ATH08p04121 LinkIcon - -
-
ATH08p04621 LinkIcon - -
-
ATH11p04069 LinkIcon - -
-
ATH11p04142 LinkIcon - -
-
ATH12p03965 LinkIcon - -
-
ATH12p04349 LinkIcon - -
-
ATH56p04103 LinkIcon - -
-
ATH56p04578 LinkIcon - -
-
ATH57p04486 LinkIcon - -
-
ATH58p04369 LinkIcon - -
-
ATH58p04956 LinkIcon - -
-
ATH59p04114 LinkIcon - -
-
ATH61p05655 LinkIcon - -
-
ATH61p05696 LinkIcon - -
-
ATH62p04118 LinkIcon - -
-
ATH63p04477 LinkIcon - -
-
ATH64p04771 LinkIcon - -
-
3 adp025247 LinkIcon Positive ATH11p09829 LinkIcon - -
-
ATH11p09922 LinkIcon - -
-
ATH61p12663 LinkIcon - -
-
ATH61p13174 LinkIcon - -
-
ATH62p10489 LinkIcon - -
-
ATH63p12192 LinkIcon - -
-
ATH63p12196 LinkIcon - -
-
ATH64p13711 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g19210
Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G74930.1); Has 5600 Blast hits to 5488 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5592; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
2
at1g49570
Peroxidase superfamily protein - Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf lamina base, leaf whorl, hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G06730.1); Has 4743 Blast hits to 4717 proteins in 317 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 358; Plants - 4305; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink).
3
at1g59171
Inositol-pentakisphosphate 2-kinase family protein - Inositol-pentakisphosphate 2-kinase family protein; FUNCTIONS IN: inositol pentakisphosphate 2-kinase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G59312.1); Has 99 Blast hits to 58 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
4
at3g16050
pyridoxine biosynthesis 1.2 Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation. pyridoxine biosynthesis 1.2 (PDX1.2); FUNCTIONS IN: protein heterodimerization activity; INVOLVED IN: pyridoxal phosphate biosynthetic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G01410.1); Has 3117 Blast hits to 3111 proteins in 1095 species: Archae - 240; Bacteria - 1784; Metazoa - 13; Fungi - 157; Plants - 173; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink).
5
at4g37780
myb domain protein 87 "encoded by the Myb-like transcription factor MYB87, regulates axillary meristem formation, expressed throughout the plant. Member of the R2R3 factor gene family." myb domain protein 87 (MYB87); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 8573 Blast hits to 8093 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 622; Fungi - 441; Plants - 5850; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit