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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 19 " Y:" 6 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn039848 LinkIcon Negative ATH14n08533 LinkIcon PM014504 LinkIcon 0.913
Dimethyl lithospermate; MS2; QIT; M-H; 20->50%
   Dimethyl lithospermate
ATH06n05357 LinkIcon - -
-
ATH06n05709 LinkIcon - -
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ATH06n05878 LinkIcon - -
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ATH06n06254 LinkIcon - -
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ATH07n05985 LinkIcon - -
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ATH08n08622 LinkIcon - -
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ATH08n08626 LinkIcon - -
-
ATH08n09630 LinkIcon - -
-
ATH09n08698 LinkIcon - -
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ATH09n09311 LinkIcon - -
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ATH10n05928 LinkIcon - -
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ATH10n06771 LinkIcon - -
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ATH11n05254 LinkIcon - -
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ATH11n05421 LinkIcon - -
-
ATH12n04535 LinkIcon - -
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ATH13n08684 LinkIcon - -
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ATH14n07798 LinkIcon - -
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ATH14n08536 LinkIcon - -
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ATH56n09905 LinkIcon - -
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ATH56n10415 LinkIcon - -
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ATH56n10653 LinkIcon - -
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ATH56n10658 LinkIcon - -
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ATH57n09843 LinkIcon - -
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ATH58n10047 LinkIcon - -
-
ATH58n10550 LinkIcon - -
-
ATH58n10804 LinkIcon - -
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ATH58n11305 LinkIcon - -
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ATH59n10040 LinkIcon - -
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ATH59n10525 LinkIcon - -
-
ATH60n09668 LinkIcon - -
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ATH60n10371 LinkIcon - -
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ATH61n09353 LinkIcon - -
-
ATH61n09565 LinkIcon - -
-
ATH61n09816 LinkIcon - -
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ATH62n09249 LinkIcon - -
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ATH62n09874 LinkIcon - -
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ATH63n09745 LinkIcon - -
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ATH63n09989 LinkIcon - -
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ATH64n09642 LinkIcon - -
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ATH64n10035 LinkIcon - -
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ATH64n10292 LinkIcon - -
-
2 adp007010 LinkIcon Positive ATH63p04101 LinkIcon PT104090 LinkIcon 0.963
Quercetin; MS2; Q-Tof; [M+H]+
   Quercetin
  Quer
  3,3',4',5,7-pentahydroxyflavone
  Flavin meletin
  Kvercetin
  Meletin
  Quercetol
  Quercetine
  Quertine
  Quercitin
  Sophoretin
  Xanthaurine
  3',4',5,7-Tetrahydroxyflavan-3-ol
  2-(3,4-Dihydroxyphenyl)-3,5,7-trihydroxy-4H-1-benzopyran-4-one
  2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxychromen-4-one
PS121201 LinkIcon 0.959
Delphinidin; MS2; QqQ; positive; CE 10 V
   Delphinidin
  Dp
  Delphinidine
  Delphinidol
  Delfinidol
  Ephdine
  3,3',4',5,5',7-Hexahydroxy-2-phenylbenzopyrylium
  3,3',4',5,5',7-Hexahydroxyflavylium
  3,5,7-trihydroxy-2-(3,4,5-trihydroxyphenyl)benzopyrylium
PT109320 LinkIcon 0.958
Quercetin-3-Arabinoside; MS2; Q-Tof; [M+H]+
   Quercetin-3-Arabinoside
  Quer-3-Ara
  Guajavarin
  2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-3-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxychromen-4-one
PT111700 LinkIcon 0.957
Quercetin-7-O-rhamnoside; MS2; Q-Tof; [M+H]+
   Quercetin-7-O-rhamnoside
  Quer-7-Rha
  Vincetoxicoside B
  2-(3,4-dihydroxyphenyl)-3,5-dihydroxy-7-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxychromen-4-one
PT108690 LinkIcon 0.952
Spiraeoside; MS2; Q-Tof; [M+H]+
   Spiraeoside
  Quer-4p-Glc
  quercetin-4'-glucoside
  Spiraein
  3,5,7-trihydroxy-2-[3-hydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]chromen-4-one
PM018158 LinkIcon 0.947
Quercetin-3-glucoside-7-hexoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-3-glucoside-7-hexoside
  Acetyl coenzyme A (C2
  0)
  Acetyl CoA
PS046502 LinkIcon 0.946
Quercetin-3-O-beta-D-galactoside; MS2; QqQ; positive; CE 20 V
   Quercetin-3-O-beta-D-galactoside
  Quer-3-Gal
  Hyperoside
  Hyperin
  quercetin-3-beta-O-galactoside
  Hyperozide
  Hyperosid
  Jyperin
  Quercetin 3-beta-D-galactopyranoside
  2-(3,4-Dihydroxyphenyl)-3-(beta-D-galactopyranosyloxy)-5,7-dihydroxy-4H-1-benzopyran-4-one
PS040901 LinkIcon 0.945
Quercetin; MS2; QqQ; positive; CE 10 V
   Quercetin
  Quer
  3,3',4',5,7-pentahydroxyflavone
  Flavin meletin
  Kvercetin
  Meletin
  Quercetol
  Quercetine
  Quertine
  Quercitin
  Sophoretin
  Xanthaurine
  3',4',5,7-Tetrahydroxyflavan-3-ol
  2-(3,4-Dihydroxyphenyl)-3,5,7-trihydroxy-4H-1-benzopyran-4-one
PM018163 LinkIcon 0.944
Quercetin-3-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-3-rhamnoside
ATH06p03681 LinkIcon - -
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ATH06p03993 LinkIcon - -
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ATH06p04497 LinkIcon - -
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ATH07p03659 LinkIcon - -
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ATH07p04321 LinkIcon - -
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ATH07p04324 LinkIcon - -
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ATH08p04055 LinkIcon - -
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ATH08p04503 LinkIcon - -
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ATH09p03701 LinkIcon - -
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ATH09p03991 LinkIcon - -
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ATH09p04084 LinkIcon - -
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ATH09p04551 LinkIcon - -
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ATH10p03583 LinkIcon - -
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ATH11p03997 LinkIcon - -
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ATH11p04152 LinkIcon - -
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ATH11p04155 LinkIcon - -
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ATH12p03654 LinkIcon - -
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ATH12p04018 LinkIcon - -
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ATH13p03900 LinkIcon - -
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ATH13p04408 LinkIcon - -
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ATH13p04649 LinkIcon - -
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ATH56p03796 LinkIcon - -
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ATH56p04044 LinkIcon - -
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ATH56p04481 LinkIcon - -
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ATH57p03820 LinkIcon - -
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ATH58p04246 LinkIcon - -
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ATH58p04249 LinkIcon - -
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ATH58p04788 LinkIcon - -
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ATH58p04967 LinkIcon - -
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ATH59p04155 LinkIcon - -
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ATH61p05616 LinkIcon - -
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ATH61p05708 LinkIcon - -
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ATH61p06023 LinkIcon - -
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ATH62p04423 LinkIcon - -
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ATH63p03846 LinkIcon - -
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ATH63p04284 LinkIcon - -
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ATH63p04485 LinkIcon - -
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ATH63p04811 LinkIcon - -
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ATH63p05075 LinkIcon - -
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2. Gene information

No. ID Short description Curator summary Computational description
1
at1g06620
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G61400.1); Has 8339 Blast hits to 8299 proteins in 1003 species: Archae - 0; Bacteria - 1128; Metazoa - 122; Fungi - 867; Plants - 4923; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink).
2
at1g72125
Major facilitator superfamily protein - Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
3
at2g21550
Bifunctional dihydrofolate reductase/thymidylate synthase - Bifunctional dihydrofolate reductase/thymidylate synthase; FUNCTIONS IN: thymidylate synthase activity, dihydrofolate reductase activity; INVOLVED IN: oxidation reduction, glycine biosynthetic process, one-carbon metabolic process, nucleotide biosynthetic process, dTMP biosynthetic process; EXPRESSED IN: stem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 1 (TAIR:AT2G16370.1); Has 12633 Blast hits to 12576 proteins in 2517 species: Archae - 33; Bacteria - 8296; Metazoa - 499; Fungi - 419; Plants - 87; Viruses - 227; Other Eukaryotes - 3072 (source: NCBI BLink).
4
at2g26480
UDP-glucosyl transferase 76D1 - UDP-glucosyl transferase 76D1 (UGT76D1); FUNCTIONS IN: UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76E1 (TAIR:AT5G59580.1); Has 7584 Blast hits to 7537 proteins in 439 species: Archae - 0; Bacteria - 532; Metazoa - 1899; Fungi - 23; Plants - 4970; Viruses - 112; Other Eukaryotes - 48 (source: NCBI BLink).
5
at2g37170
plasma membrane intrinsic protein 2 a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev plasma membrane intrinsic protein 2 (PIP2B); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: root, cultured cell, callus; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT2G37180.1); Has 10851 Blast hits to 10838 proteins in 2234 species: Archae - 81; Bacteria - 5194; Metazoa - 1467; Fungi - 455; Plants - 2519; Viruses - 2; Other Eukaryotes - 1133 (source: NCBI BLink).
6
at2g37180
Aquaporin-like superfamily protein a member of the plasma membrane intrinsic protein PIP2. functions as aquaporin and is involved in dessication. RESPONSIVE TO DESICCATION 28 (RD28); FUNCTIONS IN: water channel activity; INVOLVED IN: response to desiccation, response to water deprivation, transport, response to osmotic stress; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: shoot, root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2 (TAIR:AT2G37170.1); Has 10809 Blast hits to 10795 proteins in 2215 species: Archae - 81; Bacteria - 5139; Metazoa - 1474; Fungi - 455; Plants - 2518; Viruses - 2; Other Eukaryotes - 1140 (source: NCBI BLink).
7
at4g30190
H(+)-ATPase 2 belongs to the P-type ATPase superfamily of cation-transporting ATPases, pumps protons out of the cell, generating a proton gradient that drives the active transport of nutrients by proton symport. has two autoinhibitory regions within the C-terminal dom H(+)-ATPase 2 (HA2); FUNCTIONS IN: ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 1 (TAIR:AT2G18960.1); Has 36409 Blast hits to 32614 proteins in 3160 species: Archae - 700; Bacteria - 23090; Metazoa - 3798; Fungi - 2556; Plants - 1882; Viruses - 3; Other Eukaryotes - 4380 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit