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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Keyword
AGI locus IDs

Choosing cell X:" 20 " Y:" 0 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn028472 LinkIcon Negative ATH06n03163 LinkIcon PM018078 LinkIcon 0.964
1-O-b-D-Glucopyranosyl sinapate; MS2; Q-TOF; M-H; 15->55V
   1-O-b-D-Glucopyranosyl sinapate
ATH14n05154 LinkIcon PM018078 LinkIcon 0.960
1-O-b-D-Glucopyranosyl sinapate; MS2; Q-TOF; M-H; 15->55V
   1-O-b-D-Glucopyranosyl sinapate
PM018080 LinkIcon 0.955
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH06n03163 LinkIcon PM018080 LinkIcon 0.954
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH09n05430 LinkIcon PM018078 LinkIcon 0.947
1-O-b-D-Glucopyranosyl sinapate; MS2; Q-TOF; M-H; 15->55V
   1-O-b-D-Glucopyranosyl sinapate
ATH10n03053 LinkIcon PM018080 LinkIcon 0.941
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH59n06057 LinkIcon PM018080 LinkIcon 0.938
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH06n03069 LinkIcon PM018080 LinkIcon 0.934
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH09n05430 LinkIcon PM018080 LinkIcon 0.933
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH59n06057 LinkIcon PT211790 LinkIcon 0.930
Sinapoyl malate; MS2; Q-Tof; [M-H]-
   Sinapoyl malate
  Sinapoyl-(S)-malate
  2-O-sinapoylmalate
  (2S)-2-[(E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoyl]oxybutanedioic acid
ATH06n03069 LinkIcon PM018078 LinkIcon 0.919
1-O-b-D-Glucopyranosyl sinapate; MS2; Q-TOF; M-H; 15->55V
   1-O-b-D-Glucopyranosyl sinapate
ATH59n06057 LinkIcon PM018078 LinkIcon 0.919
1-O-b-D-Glucopyranosyl sinapate; MS2; Q-TOF; M-H; 15->55V
   1-O-b-D-Glucopyranosyl sinapate
ATH06n03069 LinkIcon PT211790 LinkIcon 0.915
Sinapoyl malate; MS2; Q-Tof; [M-H]-
   Sinapoyl malate
  Sinapoyl-(S)-malate
  2-O-sinapoylmalate
  (2S)-2-[(E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoyl]oxybutanedioic acid
ATH57n06876 LinkIcon PT211790 LinkIcon 0.914
Sinapoyl malate; MS2; Q-Tof; [M-H]-
   Sinapoyl malate
  Sinapoyl-(S)-malate
  2-O-sinapoylmalate
  (2S)-2-[(E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoyl]oxybutanedioic acid
ATH57n06135 LinkIcon PM018078 LinkIcon 0.912
1-O-b-D-Glucopyranosyl sinapate; MS2; Q-TOF; M-H; 15->55V
   1-O-b-D-Glucopyranosyl sinapate
PM018080 LinkIcon 0.908
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH57n06876 LinkIcon PM018080 LinkIcon 0.908
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
PM018078 LinkIcon 0.906
1-O-b-D-Glucopyranosyl sinapate; MS2; Q-TOF; M-H; 15->55V
   1-O-b-D-Glucopyranosyl sinapate
ATH57n06135 LinkIcon PT211790 LinkIcon 0.902
Sinapoyl malate; MS2; Q-Tof; [M-H]-
   Sinapoyl malate
  Sinapoyl-(S)-malate
  2-O-sinapoylmalate
  (2S)-2-[(E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoyl]oxybutanedioic acid
ATH14n05154 LinkIcon PT211790 LinkIcon 0.900
Sinapoyl malate; MS2; Q-Tof; [M-H]-
   Sinapoyl malate
  Sinapoyl-(S)-malate
  2-O-sinapoylmalate
  (2S)-2-[(E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoyl]oxybutanedioic acid
ATH07n03045 LinkIcon - -
-
ATH07n03507 LinkIcon - -
-
ATH07n03513 LinkIcon - -
-
ATH08n05364 LinkIcon - -
-
ATH08n05618 LinkIcon - -
-
ATH09n05427 LinkIcon - -
-
ATH09n06336 LinkIcon - -
-
ATH11n02771 LinkIcon - -
-
ATH13n04802 LinkIcon - -
-
ATH13n04805 LinkIcon - -
-
ATH13n05393 LinkIcon - -
-
ATH14n04632 LinkIcon - -
-
ATH56n06610 LinkIcon - -
-
ATH56n07105 LinkIcon - -
-
ATH57n06632 LinkIcon - -
-
ATH58n06174 LinkIcon - -
-
ATH58n06690 LinkIcon - -
-
ATH61n05894 LinkIcon - -
-
ATH62n05662 LinkIcon - -
-
ATH62n06622 LinkIcon - -
-
ATH63n05471 LinkIcon - -
-
ATH63n05735 LinkIcon - -
-
ATH63n06186 LinkIcon - -
-
ATH63n06438 LinkIcon - -
-
ATH64n06098 LinkIcon - -
-
ATH64n06478 LinkIcon - -
-
2 adn034519 LinkIcon Negative ATH09n08273 LinkIcon - -
-
ATH14n06524 LinkIcon - -
-
ATH14n06913 LinkIcon - -
-
ATH58n09766 LinkIcon - -
-
ATH64n07905 LinkIcon - -
-
ATH64n08641 LinkIcon - -
-
3 adn040875 LinkIcon Negative ATH10n05882 LinkIcon - -
-
ATH10n06132 LinkIcon - -
-
ATH14n07521 LinkIcon - -
-
ATH14n07524 LinkIcon - -
-
ATH14n08093 LinkIcon - -
-
ATH64n09341 LinkIcon - -
-
ATH64n09990 LinkIcon - -
-
ATH64n09993 LinkIcon - -
-
4 adn041336 LinkIcon Negative ATH06n06106 LinkIcon - -
-
ATH06n06641 LinkIcon - -
-
ATH07n07136 LinkIcon - -
-
ATH08n09250 LinkIcon - -
-
ATH11n06079 LinkIcon - -
-
ATH13n08912 LinkIcon - -
-
ATH14n08165 LinkIcon - -
-
ATH14n08168 LinkIcon - -
-
ATH14n08727 LinkIcon - -
-
ATH14n08730 LinkIcon - -
-
ATH56n10686 LinkIcon - -
-
ATH56n11695 LinkIcon - -
-
ATH58n11087 LinkIcon - -
-
ATH58n12109 LinkIcon - -
-
ATH61n10070 LinkIcon - -
-
ATH61n10786 LinkIcon - -
-
ATH63n10015 LinkIcon - -
-
ATH63n10018 LinkIcon - -
-
ATH63n11280 LinkIcon - -
-
ATH64n10066 LinkIcon - -
-
ATH64n10069 LinkIcon - -
-
ATH64n10755 LinkIcon - -
-
ATH64n10758 LinkIcon - -
-
5 adn066830 LinkIcon Negative ATH06n10461 LinkIcon - -
-
ATH14n11886 LinkIcon - -
-
ATH56n15734 LinkIcon - -
-
ATH64n14970 LinkIcon - -
-
6 adp004484 LinkIcon Positive ATH63p03264 LinkIcon PM018106 LinkIcon 0.912
Vanilloylcholine 4-O-hexoside; MS2; Q-TOF; M+H; 15->55V
   Vanilloylcholine 4-O-hexoside
  4-Hexosyloxy-3-methoxybenzoylcholine
ATH07p02681 LinkIcon - -
-
ATH07p03151 LinkIcon - -
-
ATH07p03152 LinkIcon - -
-
ATH08p03488 LinkIcon - -
-
ATH09p02939 LinkIcon - -
-
ATH10p02656 LinkIcon - -
-
ATH10p03516 LinkIcon - -
-
ATH12p02660 LinkIcon - -
-
ATH14p02963 LinkIcon - -
-
ATH14p03227 LinkIcon - -
-
ATH56p03267 LinkIcon - -
-
ATH57p03265 LinkIcon - -
-
ATH58p03001 LinkIcon - -
-
ATH58p03582 LinkIcon - -
-
ATH59p03009 LinkIcon - -
-
ATH59p03580 LinkIcon - -
-
ATH59p03757 LinkIcon - -
-
ATH61p04350 LinkIcon - -
-
ATH63p03265 LinkIcon - -
-
ATH63p03792 LinkIcon - -
-
ATH64p02737 LinkIcon - -
-
ATH64p03275 LinkIcon - -
-
7 adp017983 LinkIcon Positive ATH13p08819 LinkIcon - -
-
ATH13p09215 LinkIcon - -
-
ATH14p08143 LinkIcon - -
-
ATH14p08146 LinkIcon - -
-
ATH14p08667 LinkIcon - -
-
ATH14p08669 LinkIcon - -
-
ATH58p09268 LinkIcon - -
-
ATH63p09618 LinkIcon - -
-
ATH63p09622 LinkIcon - -
-
ATH63p10382 LinkIcon - -
-
ATH63p10880 LinkIcon - -
-
ATH64p09448 LinkIcon - -
-
ATH64p09451 LinkIcon - -
-
ATH64p10180 LinkIcon - -
-
8 adp017984 LinkIcon Positive ATH13p09221 LinkIcon - -
-
ATH14p08149 LinkIcon - -
-
ATH14p08360 LinkIcon - -
-
ATH14p08669 LinkIcon - -
-
ATH14p09011 LinkIcon - -
-
ATH59p07629 LinkIcon - -
-
ATH63p09622 LinkIcon - -
-
ATH63p10125 LinkIcon - -
-
ATH63p10386 LinkIcon - -
-
ATH64p09451 LinkIcon - -
-
ATH64p09454 LinkIcon - -
-
ATH64p10183 LinkIcon - -
-
ATH64p10186 LinkIcon - -
-
9 adp020092 LinkIcon Positive ATH14p09131 LinkIcon PS003402 LinkIcon 0.968
Serotonin hydrochloride; MS2; QqQ; positive; CE 20 V
   Serotonin hydrochloride
  5-HT
  5-Hydoxytryptamine hydrochloride
  3-(2-Aminoethyl)-5-hydroxyindole hydrochloride
  Enteramine
ATH14p09605 LinkIcon PS003402 LinkIcon 0.967
Serotonin hydrochloride; MS2; QqQ; positive; CE 20 V
   Serotonin hydrochloride
  5-HT
  5-Hydoxytryptamine hydrochloride
  3-(2-Aminoethyl)-5-hydroxyindole hydrochloride
  Enteramine
ATH64p11504 LinkIcon PS003402 LinkIcon 0.958
Serotonin hydrochloride; MS2; QqQ; positive; CE 20 V
   Serotonin hydrochloride
  5-HT
  5-Hydoxytryptamine hydrochloride
  3-(2-Aminoethyl)-5-hydroxyindole hydrochloride
  Enteramine
ATH14p09131 LinkIcon PS003403 LinkIcon 0.957
Serotonin hydrochloride; MS2; QqQ; positive; CE 30 V
   Serotonin hydrochloride
  5-HT
  5-Hydoxytryptamine hydrochloride
  3-(2-Aminoethyl)-5-hydroxyindole hydrochloride
  Enteramine
ATH14p09605 LinkIcon PS003403 LinkIcon 0.956
Serotonin hydrochloride; MS2; QqQ; positive; CE 30 V
   Serotonin hydrochloride
  5-HT
  5-Hydoxytryptamine hydrochloride
  3-(2-Aminoethyl)-5-hydroxyindole hydrochloride
  Enteramine
ATH06p09166 LinkIcon PM018178 LinkIcon 0.949
Spermidine-disinapyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-disinapyl
ATH64p11504 LinkIcon PS003403 LinkIcon 0.948
Serotonin hydrochloride; MS2; QqQ; positive; CE 30 V
   Serotonin hydrochloride
  5-HT
  5-Hydoxytryptamine hydrochloride
  3-(2-Aminoethyl)-5-hydroxyindole hydrochloride
  Enteramine
ATH13p10824 LinkIcon PM018178 LinkIcon 0.945
Spermidine-disinapyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-disinapyl
ATH13p10230 LinkIcon PM018178 LinkIcon 0.906
Spermidine-disinapyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-disinapyl
ATH14p09131 LinkIcon PS003401 LinkIcon 0.905
Serotonin hydrochloride; MS2; QqQ; positive; CE 10 V
   Serotonin hydrochloride
  5-HT
  5-Hydoxytryptamine hydrochloride
  3-(2-Aminoethyl)-5-hydroxyindole hydrochloride
  Enteramine
ATH14p09605 LinkIcon PS003401 LinkIcon 0.904
Serotonin hydrochloride; MS2; QqQ; positive; CE 10 V
   Serotonin hydrochloride
  5-HT
  5-Hydoxytryptamine hydrochloride
  3-(2-Aminoethyl)-5-hydroxyindole hydrochloride
  Enteramine
ATH08p09471 LinkIcon - -
-
ATH14p09928 LinkIcon - -
-
ATH56p09049 LinkIcon - -
-
ATH58p11346 LinkIcon - -
-
ATH63p11600 LinkIcon - -
-
ATH63p12096 LinkIcon - -
-
ATH64p11290 LinkIcon - -
-
10 adp034074 LinkIcon Positive ATH14p12156 LinkIcon PM018115 LinkIcon 0.979
Feruloyl-containing metabolites; MS2; Q-TOF; M+H; 15->55V
   Feruloyl-containing metabolites
ATH64p14990 LinkIcon PM018115 LinkIcon 0.905
Feruloyl-containing metabolites; MS2; Q-TOF; M+H; 15->55V
   Feruloyl-containing metabolites
ATH08p12134 LinkIcon - -
-
ATH09p11225 LinkIcon - -
-
ATH10p09866 LinkIcon - -
-
ATH13p13937 LinkIcon - -
-
ATH14p12159 LinkIcon - -
-
ATH58p14758 LinkIcon - -
-
ATH59p12790 LinkIcon - -
-
ATH63p13836 LinkIcon - -
-
ATH63p16262 LinkIcon - -
-
ATH63p16492 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at3g12230
serine carboxypeptidase-like 14 - serine carboxypeptidase-like 14 (scpl14); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 15 (TAIR:AT3G12240.1); Has 3660 Blast hits to 3566 proteins in 378 species: Archae - 0; Bacteria - 216; Metazoa - 635; Fungi - 834; Plants - 1566; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink).
2
at3g12240
serine carboxypeptidase-like 15 - serine carboxypeptidase-like 15 (SCPL15); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 14 (TAIR:AT3G12230.1); Has 3798 Blast hits to 3708 proteins in 428 species: Archae - 0; Bacteria - 341; Metazoa - 625; Fungi - 840; Plants - 1569; Viruses - 0; Other Eukaryotes - 423 (source: NCBI BLink).
3
at3g29410
Terpenoid cyclases/Protein prenyltransferases superfamily protein - Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1); Has 1701 Blast hits to 1673 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1697; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
4
at4g11880
AGAMOUS-like 14 AGL12, AGL14, and AGL17 are all preferentially expressed in root tissues and therefore represent the only characterized MADS box genes expressed in roots. AGAMOUS-like 14 (AGL14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 19 (TAIR:AT4G22950.1); Has 7256 Blast hits to 7253 proteins in 915 species: Archae - 0; Bacteria - 4; Metazoa - 632; Fungi - 309; Plants - 6224; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).
5
at4g20210
Terpenoid cyclases/Protein prenyltransferases superfamily protein - Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT4G20200.1); Has 1635 Blast hits to 1609 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1631; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
6
at4g28410
Tyrosine transaminase family protein - Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT2G20610.1); Has 36818 Blast hits to 36812 proteins in 2952 species: Archae - 883; Bacteria - 26284; Metazoa - 751; Fungi - 692; Plants - 1240; Viruses - 0; Other Eukaryotes - 6968 (source: NCBI BLink).
7
at5g47450
tonoplast intrinsic protein 2;3 Tonoplast intrinsic protein, transports ammonium (NH3) and methylammonium across the tonoplast membrane, gene expression shows diurnal regulation and is upregulated by ammonium (NH3). tonoplast intrinsic protein 2;3 (TIP2;3); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2;2 (TAIR:AT4G17340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
8
at5g50590
hydroxysteroid dehydrogenase 4 Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5. hydroxysteroid dehydrogenase 4 (HSD4); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 7 (TAIR:AT5G50690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
9
at5g50690
hydroxysteroid dehydrogenase 7 Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5. hydroxysteroid dehydrogenase 7 (HSD7); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 4 (TAIR:AT5G50590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit