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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 20 " Y:" 3 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn098947 LinkIcon Negative ATH62n17498 LinkIcon PS045407 LinkIcon 0.964
Rutin ; MS2; QqQ; negative; CE 10 V
   Rutin
  Quer-3-Glc-6pp-Rha
  quercetin-3-O-rutinoside
  rutoside
  Rutinic acid
  Vitamin P
  Quercetin, 3-(6-O-alpha-L-rhamnopyranosyl-beta-D-glucopyranoside
  3,3',4',5,7-Pentahydroxyflavone-3-rhamnoglucoside
  3,3',4',5,7-pentahydroxyflavone-3-rutinoside
  Bioflavonoid
  Birutan
  Eldrin
  Globulariacitrin
  Globularicitrin
  Ilixathin
  Melin
  Myrticalorin
  Myrticol
ATH64n17147 LinkIcon PS045407 LinkIcon 0.964
Rutin ; MS2; QqQ; negative; CE 10 V
   Rutin
  Quer-3-Glc-6pp-Rha
  quercetin-3-O-rutinoside
  rutoside
  Rutinic acid
  Vitamin P
  Quercetin, 3-(6-O-alpha-L-rhamnopyranosyl-beta-D-glucopyranoside
  3,3',4',5,7-Pentahydroxyflavone-3-rhamnoglucoside
  3,3',4',5,7-pentahydroxyflavone-3-rutinoside
  Bioflavonoid
  Birutan
  Eldrin
  Globulariacitrin
  Globularicitrin
  Ilixathin
  Melin
  Myrticalorin
  Myrticol
PM010116 LinkIcon 0.960
Kaempferol 3-O-hydroxyferuloyl diglucoside; MS2; QIT; M-H; 40V
   Kaempferol 3-O-hydroxyferuloyl diglucoside
ATH62n17498 LinkIcon PM010116 LinkIcon 0.959
Kaempferol 3-O-hydroxyferuloyl diglucoside; MS2; QIT; M-H; 40V
   Kaempferol 3-O-hydroxyferuloyl diglucoside
PS085307 LinkIcon 0.947
luteolin-3',7-di-O-glucoside ; MS2; QqQ; negative; CE 10 V
   luteolin-3',7-di-O-glucoside
  Lutl-3p-Glc-7-Glc
ATH64n17147 LinkIcon PS085307 LinkIcon 0.946
luteolin-3',7-di-O-glucoside ; MS2; QqQ; negative; CE 10 V
   luteolin-3',7-di-O-glucoside
  Lutl-3p-Glc-7-Glc
PM010122 LinkIcon 0.944
Kaempferol 3-O-coumaroyl diglucoside; MS2; QIT; M-H; 40V
   Kaempferol 3-O-coumaroyl diglucoside
ATH62n17498 LinkIcon PM010122 LinkIcon 0.943
Kaempferol 3-O-coumaroyl diglucoside; MS2; QIT; M-H; 40V
   Kaempferol 3-O-coumaroyl diglucoside
ATH64n17147 LinkIcon PM007019 LinkIcon 0.918
Kaempferol-3-O-sophoroside-methoxycaffeoyl; MS2; QIT; M-H; 0.3->2V
   Kaempferol-3-O-sophoroside-methoxycaffeoyl
ATH62n17498 LinkIcon PM007019 LinkIcon 0.916
Kaempferol-3-O-sophoroside-methoxycaffeoyl; MS2; QIT; M-H; 0.3->2V
   Kaempferol-3-O-sophoroside-methoxycaffeoyl
ATH64n17147 LinkIcon PM003835 LinkIcon 0.911
Isoorientin-7-O-[6-feruloyl]-glucoside-2''-O-glucoside; MS2; QIT; M-H; 0.3->2V
   Isoorientin-7-O-[6-feruloyl]-glucoside-2''-O-glucoside
ATH62n17498 LinkIcon PM003835 LinkIcon 0.909
Isoorientin-7-O-[6-feruloyl]-glucoside-2''-O-glucoside; MS2; QIT; M-H; 0.3->2V
   Isoorientin-7-O-[6-feruloyl]-glucoside-2''-O-glucoside

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g07260
UDP-glucosyl transferase 71C3 - UDP-glucosyl transferase 71C3 (UGT71C3); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C2 (TAIR:AT2G29740.1); Has 7762 Blast hits to 7715 proteins in 456 species: Archae - 0; Bacteria - 482; Metazoa - 2213; Fungi - 22; Plants - 4940; Viruses - 44; Other Eukaryotes - 61 (source: NCBI BLink).
2
at1g11580
methylesterase PCR A - methylesterase PCR A (PMEPCRA); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT1G11590.1); Has 3127 Blast hits to 3075 proteins in 484 species: Archae - 6; Bacteria - 913; Metazoa - 1; Fungi - 197; Plants - 1984; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
3
at1g73160
UDP-Glycosyltransferase superfamily protein - UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G19460.1); Has 13084 Blast hits to 13074 proteins in 2221 species: Archae - 678; Bacteria - 10413; Metazoa - 93; Fungi - 132; Plants - 161; Viruses - 0; Other Eukaryotes - 1607 (source: NCBI BLink).
4
at1g79310
metacaspase 7 - metacaspase 7 (MC7); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, male gametophyte, root; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 4 (TAIR:AT1G79340.1); Has 1196 Blast hits to 1169 proteins in 284 species: Archae - 7; Bacteria - 340; Metazoa - 0; Fungi - 299; Plants - 319; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).
5
at2g43880
Pectin lyase-like superfamily protein - Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43890.1); Has 4195 Blast hits to 4175 proteins in 547 species: Archae - 4; Bacteria - 1296; Metazoa - 14; Fungi - 1271; Plants - 1481; Viruses - 2; Other Eukaryotes - 127 (source: NCBI BLink).
6
at3g05150
Major facilitator superfamily protein - Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G18840.1); Has 29751 Blast hits to 29100 proteins in 2018 species: Archae - 566; Bacteria - 13294; Metazoa - 5300; Fungi - 6650; Plants - 2634; Viruses - 0; Other Eukaryotes - 1307 (source: NCBI BLink).
7
at3g09940
monodehydroascorbate reductase Encodes a member of the monodehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica. monodehydroascorbate reductase (MDHAR); FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: response to jasmonic acid stimulus, regulation of symbiosis, encompassing mutualism through parasitism, response to water deprivation, response to salt stress, response to symbiotic fungus; LOCATED IN: cytosol; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 31567 Blast hits to 31505 proteins in 3041 species: Archae - 687; Bacteria - 24961; Metazoa - 895; Fungi - 665; Plants - 718; Viruses - 0; Other Eukaryotes - 3641 (source: NCBI BLink).
8
at3g25250
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein Arabidopsis protein kinase AGC2-1; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, stamen, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G13000.1); Has 87313 Blast hits to 84259 proteins in 2947 species: Archae - 68; Bacteria - 13079; Metazoa - 33183; Fungi - 11494; Plants - 12113; Viruses - 235; Other Eukaryotes - 17141 (source: NCBI BLink).
9
at4g08780
Peroxidase superfamily protein - Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: vacuole; EXPRESSED IN: embryo, hypocotyl, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G08770.1); Has 4369 Blast hits to 4341 proteins in 241 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 39; Plants - 4275; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
10
at4g21830
methionine sulfoxide reductase B7 - methionine sulfoxide reductase B7 (MSRB7); CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B8 (TAIR:AT4G21840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
11
at4g21840
methionine sulfoxide reductase B8 - methionine sulfoxide reductase B8 (MSRB8); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B7 (TAIR:AT4G21830.2); Has 8391 Blast hits to 8388 proteins in 2248 species: Archae - 76; Bacteria - 4942; Metazoa - 266; Fungi - 135; Plants - 208; Viruses - 1; Other Eukaryotes - 2763 (source: NCBI BLink).
12
at4g28650
Leucine-rich repeat transmembrane protein kinase family protein - Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, guard cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G08590.1); Has 236312 Blast hits to 142770 proteins in 4269 species: Archae - 150; Bacteria - 21752; Metazoa - 75925; Fungi - 11533; Plants - 97988; Viruses - 432; Other Eukaryotes - 28532 (source: NCBI BLink).
13
at5g03570
iron regulated 2 Encodes FPN2, a tonoplast localized nickel transport protein. FPN2 is one of the Arabidopsis orthologs (AT2G38460/IREG1/FPN1 and AT5G03570/IREG2/FPN2) the iron efflux transporter ferroportin (FPN) identified in animals. iron regulated 2 (IREG2); CONTAINS InterPro DOMAIN/s: Ferroporti-1 (InterPro:IPR009716), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: iron regulated 1 (TAIR:AT2G38460.1); Has 410 Blast hits to 334 proteins in 106 species: Archae - 0; Bacteria - 50; Metazoa - 178; Fungi - 61; Plants - 98; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
14
at5g06800
myb-like HTH transcriptional regulator family protein - myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 1663 Blast hits to 1650 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
15
at5g14020
Endosomal targeting BRO1-like domain-containing protein - Endosomal targeting BRO1-like domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: vacuole; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G73390.3); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit