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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 20 " Y:" 4 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn038788 LinkIcon Negative ATH60n09419 LinkIcon PM018064 LinkIcon 0.990
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
PM018063 LinkIcon 0.988
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH57n09586 LinkIcon PM018064 LinkIcon 0.985
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH59n10030 LinkIcon PM018063 LinkIcon 0.984
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH57n09586 LinkIcon PM018063 LinkIcon 0.983
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH57n10301 LinkIcon PM018064 LinkIcon 0.982
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
  Lariciresinol-hexoside
ATH59n09046 LinkIcon PM018064 LinkIcon 0.982
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH59n10030 LinkIcon PM018064 LinkIcon 0.981
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH59n09046 LinkIcon PM018063 LinkIcon 0.979
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH62n08526 LinkIcon PM018064 LinkIcon 0.974
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH59n10030 LinkIcon PM018062 LinkIcon 0.971
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH62n08526 LinkIcon PM018063 LinkIcon 0.970
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH60n09419 LinkIcon PM018062 LinkIcon 0.965
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH62n09472 LinkIcon PM018064 LinkIcon 0.963
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
PM018063 LinkIcon 0.961
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH57n09586 LinkIcon PM018062 LinkIcon 0.960
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH57n10301 LinkIcon PM018062 LinkIcon 0.960
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH59n09046 LinkIcon PM018062 LinkIcon 0.947
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH58n10287 LinkIcon PM018064 LinkIcon 0.946
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH62n09472 LinkIcon PM018062 LinkIcon 0.945
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH58n10287 LinkIcon PM018063 LinkIcon 0.937
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH62n08526 LinkIcon PM018062 LinkIcon 0.933
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH06n05342 LinkIcon - -
-
ATH08n07983 LinkIcon - -
-
ATH08n08608 LinkIcon - -
-
ATH09n08029 LinkIcon - -
-
ATH09n08683 LinkIcon - -
-
ATH10n05268 LinkIcon - -
-
ATH10n06363 LinkIcon - -
-
ATH12n03980 LinkIcon - -
-
ATH12n04191 LinkIcon - -
-
ATH14n06917 LinkIcon - -
-
ATH14n07553 LinkIcon - -
-
ATH56n09390 LinkIcon - -
-
ATH56n10149 LinkIcon - -
-
ATH57n09103 LinkIcon - -
-
ATH57n10080 LinkIcon - -
-
ATH58n09767 LinkIcon - -
-
ATH58n10029 LinkIcon - -
-
ATH59n09043 LinkIcon - -
-
ATH59n10262 LinkIcon - -
-
ATH60n09191 LinkIcon - -
-
ATH60n09656 LinkIcon - -
-
ATH61n08888 LinkIcon - -
-
ATH62n08523 LinkIcon - -
-
ATH62n09469 LinkIcon - -
-
ATH64n08901 LinkIcon - -
-
ATH64n09371 LinkIcon - -
-
ATH64n09848 LinkIcon - -
-
2 adn038789 LinkIcon Negative ATH60n09419 LinkIcon PM018064 LinkIcon 0.990
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
PM018063 LinkIcon 0.988
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH57n09586 LinkIcon PM018064 LinkIcon 0.985
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH59n10030 LinkIcon PM018063 LinkIcon 0.984
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH57n09586 LinkIcon PM018063 LinkIcon 0.983
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH57n10301 LinkIcon PM018063 LinkIcon 0.982
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
  Lariciresinol-hexoside
ATH59n09046 LinkIcon PM018064 LinkIcon 0.982
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH59n10030 LinkIcon PM018064 LinkIcon 0.981
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH59n09046 LinkIcon PM018063 LinkIcon 0.979
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH62n08526 LinkIcon PM018064 LinkIcon 0.974
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH59n10030 LinkIcon PM018062 LinkIcon 0.971
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH62n08526 LinkIcon PM018063 LinkIcon 0.970
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH60n09419 LinkIcon PM018062 LinkIcon 0.965
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH62n09472 LinkIcon PM018064 LinkIcon 0.963
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
PM018063 LinkIcon 0.961
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH57n09586 LinkIcon PM018062 LinkIcon 0.960
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH57n10301 LinkIcon PM018062 LinkIcon 0.960
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH59n09046 LinkIcon PM018062 LinkIcon 0.947
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH58n10287 LinkIcon PM018064 LinkIcon 0.946
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH62n09472 LinkIcon PM018062 LinkIcon 0.945
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH58n10287 LinkIcon PM018063 LinkIcon 0.937
Lariciresinol-hexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-hexoside
ATH62n08526 LinkIcon PM018062 LinkIcon 0.933
Lariciresinol-dihexoside; MS2; Q-TOF; M-H; 15->55V
   Lariciresinol-dihexoside
ATH06n05342 LinkIcon - -
-
ATH10n05268 LinkIcon - -
-
ATH10n06363 LinkIcon - -
-
ATH12n04191 LinkIcon - -
-
ATH13n08258 LinkIcon - -
-
ATH14n06917 LinkIcon - -
-
ATH14n07553 LinkIcon - -
-
ATH56n10149 LinkIcon - -
-
ATH57n10080 LinkIcon - -
-
ATH59n09043 LinkIcon - -
-
ATH59n10262 LinkIcon - -
-
ATH60n09656 LinkIcon - -
-
ATH61n08888 LinkIcon - -
-
ATH62n08523 LinkIcon - -
-
ATH62n09469 LinkIcon - -
-
ATH63n09491 LinkIcon - -
-
ATH64n09848 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g12160
Flavin-binding monooxygenase family protein - Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT1G12130.1); Has 8661 Blast hits to 8102 proteins in 1035 species: Archae - 4; Bacteria - 3767; Metazoa - 1139; Fungi - 1126; Plants - 753; Viruses - 0; Other Eukaryotes - 1872 (source: NCBI BLink).
2
at1g16300
glyceraldehyde-3-phosphate dehydrogenase of plastid 2 Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots. glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (GAPCP-2); CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (TAIR:AT1G79530.1); Has 25238 Blast hits to 25227 proteins in 6343 species: Archae - 51; Bacteria - 10898; Metazoa - 2382; Fungi - 2852; Plants - 3834; Viruses - 0; Other Eukaryotes - 5221 (source: NCBI BLink).
3
at1g23760
BURP domain-containing protein Encodes aromatic rich glycoprotein JP630. JP630; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: polygalacturonase 2 (TAIR:AT1G70370.2); Has 1783 Blast hits to 1423 proteins in 248 species: Archae - 0; Bacteria - 362; Metazoa - 287; Fungi - 197; Plants - 556; Viruses - 4; Other Eukaryotes - 377 (source: NCBI BLink).
4
at1g30510
root FNR 2 Encodes a root-type ferredoxin:NADP(H) oxidoreductase. root FNR 2 (RFNR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Ferredoxin--NADP reductase (InterPro:IPR012146); BEST Arabidopsis thaliana protein match is: root FNR 1 (TAIR:AT4G05390.1); Has 6645 Blast hits to 6645 proteins in 1680 species: Archae - 12; Bacteria - 3566; Metazoa - 779; Fungi - 733; Plants - 567; Viruses - 0; Other Eukaryotes - 988 (source: NCBI BLink).
5
at1g66470
ROOT HAIR DEFECTIVE6 - ROOT HAIR DEFECTIVE6 (RHD6); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: RHD SIX-LIKE 1 (TAIR:AT5G37800.1); Has 2452 Blast hits to 2438 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 23; Fungi - 2; Plants - 2416; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
6
at1g78090
trehalose-6-phosphate phosphatase homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases trehalose-6-phosphate phosphatase (TPPB); CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G22210.1); Has 2381 Blast hits to 2375 proteins in 857 species: Archae - 41; Bacteria - 1374; Metazoa - 220; Fungi - 153; Plants - 455; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
7
at1g79530
glyceraldehyde-3-phosphate dehydrogenase of plastid 1 Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots. glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (GAPCP-1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: plastid, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (TAIR:AT1G16300.1); Has 25337 Blast hits to 25325 proteins in 6357 species: Archae - 82; Bacteria - 10921; Metazoa - 2380; Fungi - 2852; Plants - 3837; Viruses - 0; Other Eukaryotes - 5265 (source: NCBI BLink).
8
at2g16970
Major facilitator superfamily protein - maternal effect embryo arrest 15 (MEE15); FUNCTIONS IN: tetracycline transporter activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetracycline resistance protein, TetA (InterPro:IPR001958), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16980.2); Has 2410 Blast hits to 2410 proteins in 970 species: Archae - 12; Bacteria - 1693; Metazoa - 248; Fungi - 4; Plants - 94; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink).
9
at2g18450
succinate dehydrogenase 1-2 Nuclear encoded mitochondrial flavoprotein subunit of succinate dehydrogenase complex . succinate dehydrogenase 1-2 (SDH1-2); CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase, flavoprotein subunit (InterPro:IPR011281), Fumarate reductase/succinate dehydrogenase, FAD-binding site (InterPro:IPR003952), Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Succinate dehydrogenase/fumarate reductase, flavoprotein subunit (InterPro:IPR014006), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-1 (TAIR:AT5G66760.1); Has 17303 Blast hits to 17274 proteins in 2651 species: Archae - 275; Bacteria - 9814; Metazoa - 271; Fungi - 379; Plants - 135; Viruses - 0; Other Eukaryotes - 6429 (source: NCBI BLink).
10
at2g19060
SGNH hydrolase-type esterase superfamily protein - SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G19050.1); Has 3295 Blast hits to 3255 proteins in 153 species: Archae - 0; Bacteria - 219; Metazoa - 0; Fungi - 6; Plants - 3058; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
11
at2g23630
SKU5 similar 16 - SKU5 similar 16 (sks16); FUNCTIONS IN: pectinesterase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 5309 Blast hits to 5276 proteins in 999 species: Archae - 6; Bacteria - 1673; Metazoa - 270; Fungi - 1945; Plants - 1254; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink).
12
at2g24610
cyclic nucleotide-gated channel 14 member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 14 (CNGC14); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 17 (TAIR:AT4G30360.1); Has 3394 Blast hits to 3208 proteins in 282 species: Archae - 0; Bacteria - 121; Metazoa - 1626; Fungi - 28; Plants - 945; Viruses - 0; Other Eukaryotes - 674 (source: NCBI BLink).
13
at2g25150
HXXXD-type acyl-transferase family protein - HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: spermidine disinapoyl acyltransferase (TAIR:AT2G23510.1); Has 2289 Blast hits to 2281 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 46; Plants - 2237; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
14
at2g47140
NAD(P)-binding Rossmann-fold superfamily protein - NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G47130.1); Has 112960 Blast hits to 112749 proteins in 3532 species: Archae - 956; Bacteria - 74077; Metazoa - 4904; Fungi - 6164; Plants - 2566; Viruses - 5; Other Eukaryotes - 24288 (source: NCBI BLink).
15
at2g47550
Plant invertase/pectin methylesterase inhibitor superfamily - Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2676 Blast hits to 2617 proteins in 319 species: Archae - 6; Bacteria - 600; Metazoa - 1; Fungi - 202; Plants - 1841; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
16
at3g10660
calmodulin-domain protein kinase cdpk isoform 2 predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%. calmodulin-domain protein kinase cdpk isoform 2 (CPK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium dependent protein kinase 1 (TAIR:AT5G04870.1); Has 145304 Blast hits to 132515 proteins in 4265 species: Archae - 224; Bacteria - 17128; Metazoa - 53382; Fungi - 18632; Plants - 28672; Viruses - 609; Other Eukaryotes - 26657 (source: NCBI BLink).
17
at4g11290
Peroxidase superfamily protein - Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
18
at5g10830
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G22530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
19
at5g14650
Pectin lyase-like superfamily protein - Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G60590.1); Has 4562 Blast hits to 4542 proteins in 626 species: Archae - 6; Bacteria - 1470; Metazoa - 14; Fungi - 1443; Plants - 1493; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink).
20
at5g23020
2-isopropylmalate synthase 2 methylthioalkymalate synthase-like. Also known as 2-isopropylmalate synthase (IMS2). encodes a methylthioalkylmalate synthase involved in the biosynthesis of aliphatic glucosinolates which accepts all the omega-methylthio-2-oxoalkanoic acids needed to form the known C3 to C8 glucosinolates in Arabidopsis. 2-isopropylmalate synthase 2 (IMS2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), Pyruvate carboxyltransferase (InterPro:IPR000891); BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase 1 (TAIR:AT5G23010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
21
at5g24100
Leucine-rich repeat protein kinase family protein - Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G53320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
22
at5g51500
Plant invertase/pectin methylesterase inhibitor superfamily - Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: sperm cell, flower, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51490.1); Has 2795 Blast hits to 2745 proteins in 322 species: Archae - 6; Bacteria - 579; Metazoa - 1; Fungi - 196; Plants - 1987; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit