Home Gene search Metabolite search PRIMe
 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
 Highlight filters
Keyword
AGI locus IDs

Choosing cell X:" 22 " Y:" 22 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn062751 LinkIcon Negative ATH09n13030 LinkIcon PM018046 LinkIcon 1.000
Kaempferol-dihexoside-rhamnoside; MS2; Q-TOF; M-H; 15->55V
   Kaempferol-dihexoside-rhamnoside
ATH13n12501 LinkIcon PM018059 LinkIcon 1.000
Quercetin-hexoside-dirhamnoside; MS2; Q-TOF; M-H; 15->55V
   Quercetin-hexoside-dirhamnoside
ATH12n07177 LinkIcon PM018059 LinkIcon 0.979
Quercetin-hexoside-dirhamnoside; MS2; Q-TOF; M-H; 15->55V
   Quercetin-hexoside-dirhamnoside
ATH11n07995 LinkIcon PM018059 LinkIcon 0.963
Quercetin-hexoside-dirhamnoside; MS2; Q-TOF; M-H; 15->55V
   Quercetin-hexoside-dirhamnoside
ATH12n07177 LinkIcon PM018046 LinkIcon 0.957
Kaempferol-dihexoside-rhamnoside; MS2; Q-TOF; M-H; 15->55V
   Kaempferol-dihexoside-rhamnoside
ATH08n13059 LinkIcon PM018046 LinkIcon 0.946
Kaempferol-dihexoside-rhamnoside; MS2; Q-TOF; M-H; 15->55V
   Kaempferol-dihexoside-rhamnoside
ATH08n13056 LinkIcon PM018047 LinkIcon 0.942
Kaempferol-dihexoside-rhamnoside; MS2; Q-TOF; M-H; 15->55V
   Kaempferol-dihexoside-rhamnoside
ATH08n13059 LinkIcon PM018059 LinkIcon 0.935
Quercetin-hexoside-dirhamnoside; MS2; Q-TOF; M-H; 15->55V
   Quercetin-hexoside-dirhamnoside
ATH63n14532 LinkIcon PM018059 LinkIcon 0.925
Quercetin-hexoside-dirhamnoside; MS2; Q-TOF; M-H; 15->55V
   Quercetin-hexoside-dirhamnoside
ATH06n09170 LinkIcon PM018059 LinkIcon 0.908
Quercetin-hexoside-dirhamnoside; MS2; Q-TOF; M-H; 15->55V
   Quercetin-hexoside-dirhamnoside
ATH59n14827 LinkIcon PM018046 LinkIcon 0.904
Kaempferol-dihexoside-rhamnoside; MS2; Q-TOF; M-H; 15->55V
   Kaempferol-dihexoside-rhamnoside
ATH07n10908 LinkIcon PM018047 LinkIcon 0.903
Kaempferol-dihexoside-rhamnoside; MS2; Q-TOF; M-H; 15->55V
   Kaempferol-dihexoside-rhamnoside
ATH64n14287 LinkIcon PT211740 LinkIcon 0.900
Quercetin-3-O-alpha-L-rhamnopyranosyl(1->2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside; MS2; Q-Tof; [M-H]-
   Quercetin-3-O-alpha-L-rhamnopyranosyl(1-2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside
  Quer-3-(Rha-Glu)-7-Rha
  Quercetin-3-neohesperidoside-7-rhamnoside
ATH06n09167 LinkIcon - -
-
ATH07n10654 LinkIcon - -
-
ATH09n13194 LinkIcon - -
-
ATH10n10022 LinkIcon - -
-
ATH10n10251 LinkIcon - -
-
ATH12n07174 LinkIcon - -
-
ATH13n12498 LinkIcon - -
-
ATH14n11268 LinkIcon - -
-
ATH14n11492 LinkIcon - -
-
ATH56n14941 LinkIcon - -
-
ATH56n14944 LinkIcon - -
-
ATH57n15086 LinkIcon - -
-
ATH57n15598 LinkIcon - -
-
ATH58n15324 LinkIcon - -
-
ATH60n15022 LinkIcon - -
-
ATH61n13912 LinkIcon - -
-
ATH62n14103 LinkIcon - -
-
ATH62n14592 LinkIcon - -
-
ATH63n14782 LinkIcon - -
-
ATH64n14042 LinkIcon - -
-
2 adn131798 LinkIcon Negative ATH62n18662 LinkIcon - -
-
ATH63n19606 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at3g16170
AMP-dependent synthetase and ligase family protein - AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G48990.1); Has 81919 Blast hits to 74550 proteins in 3809 species: Archae - 1169; Bacteria - 53765; Metazoa - 3235; Fungi - 4485; Plants - 2227; Viruses - 1; Other Eukaryotes - 17037 (source: NCBI BLink).
2
at5g01690
cation/H+ exchanger 27 member of Putative Na+/H+ antiporter family cation/H+ exchanger 27 (CHX27); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 26 (TAIR:AT5G01680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
3
at5g14870
cyclic nucleotide-gated channel 18 Encodes a member of the cyclic nucleotide gated channel family that is asymmetrically localized to the plasma membrane at the growing tip of the pollen tube and is involved in pollen tube growth. It likely directly transduces a cNMP signal into an ion flux that can produce a localized signal capable of regulating the pollen tip-growth machinery. cyclic nucleotide-gated channel 18 (CNGC18); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 16 (TAIR:AT3G48010.1); Has 3357 Blast hits to 3225 proteins in 243 species: Archae - 0; Bacteria - 71; Metazoa - 1532; Fungi - 0; Plants - 967; Viruses - 0; Other Eukaryotes - 787 (source: NCBI BLink).
4
at5g38120
AMP-dependent synthetase and ligase family protein - AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G20500.1); Has 83515 Blast hits to 76136 proteins in 3676 species: Archae - 1169; Bacteria - 53948; Metazoa - 3493; Fungi - 4649; Plants - 2738; Viruses - 1; Other Eukaryotes - 17517 (source: NCBI BLink).

Creative Commons License
RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit