Home Gene search Metabolite search PRIMe
 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 22 " Y:" 7 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn028484 LinkIcon Negative ATH59n07079 LinkIcon PM018068 LinkIcon 0.973
Guaiasylglycerol-beta-feruloyl ether related metabolite; MS2; Q-TOF; M-H; 15->55V
   Guaiasylglycerol-beta-feruloyl ether related metabolite
  F(4-O-b)G related metabolite#2
ATH59n06078 LinkIcon PM018068 LinkIcon 0.963
Guaiasylglycerol-beta-feruloyl ether related metabolite; MS2; Q-TOF; M-H; 15->55V
   Guaiasylglycerol-beta-feruloyl ether related metabolite
  F(4-O-b)G related metabolite#2
ATH59n07079 LinkIcon PM018067 LinkIcon 0.925
Guaiasylglycerol-beta-feruloyl ether related metabolite; MS2; Q-TOF; M-H; 15->55V
   Guaiasylglycerol-beta-feruloyl ether related metabolite
  F(4-O-b)G related metabolite#1
  Guaiasylglycerol-beta-feruloyl ether related metabolite
  F(4-O-b)G related metabolite#4
ATH59n06078 LinkIcon PM018069 LinkIcon 0.922
Guaiasylglycerol-beta-feruloyl ether related metabolite; MS2; Q-TOF; M-H; 15->55V
   Guaiasylglycerol-beta-feruloyl ether related metabolite
  F(4-O-b)G related metabolite#4
ATH57n06156 LinkIcon PM018068 LinkIcon 0.915
Guaiasylglycerol-beta-feruloyl ether related metabolite; MS2; Q-TOF; M-H; 15->55V
   Guaiasylglycerol-beta-feruloyl ether related metabolite
  F(4-O-b)G related metabolite#2
ATH59n06078 LinkIcon PM018067 LinkIcon 0.912
Guaiasylglycerol-beta-feruloyl ether related metabolite; MS2; Q-TOF; M-H; 15->55V
   Guaiasylglycerol-beta-feruloyl ether related metabolite
  F(4-O-b)G related metabolite#1
ATH57n06156 LinkIcon PM018069 LinkIcon 0.905
Guaiasylglycerol-beta-feruloyl ether related metabolite; MS2; Q-TOF; M-H; 15->55V
   Guaiasylglycerol-beta-feruloyl ether related metabolite
  F(4-O-b)G related metabolite#4
ATH06n02978 LinkIcon - -
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ATH06n03187 LinkIcon - -
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ATH07n03064 LinkIcon - -
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ATH07n03068 LinkIcon - -
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ATH07n03535 LinkIcon - -
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ATH07n03944 LinkIcon - -
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ATH08n05639 LinkIcon - -
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ATH08n06288 LinkIcon - -
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ATH09n05451 LinkIcon - -
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ATH09n06356 LinkIcon - -
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ATH10n03069 LinkIcon - -
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ATH10n03528 LinkIcon - -
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ATH10n03976 LinkIcon - -
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ATH11n02466 LinkIcon - -
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ATH11n03134 LinkIcon - -
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ATH12n02298 LinkIcon - -
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ATH12n02504 LinkIcon - -
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ATH12n02672 LinkIcon - -
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ATH12n02675 LinkIcon - -
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ATH13n04583 LinkIcon - -
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ATH13n05162 LinkIcon - -
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ATH13n05599 LinkIcon - -
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ATH14n05046 LinkIcon - -
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ATH14n05177 LinkIcon - -
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ATH56n06122 LinkIcon - -
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ATH56n07129 LinkIcon - -
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ATH57n06654 LinkIcon - -
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ATH57n06897 LinkIcon - -
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ATH57n07153 LinkIcon - -
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ATH58n06197 LinkIcon - -
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ATH58n07471 LinkIcon - -
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ATH59n06329 LinkIcon - -
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ATH59n07317 LinkIcon - -
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ATH60n06037 LinkIcon - -
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ATH60n07004 LinkIcon - -
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ATH61n05435 LinkIcon - -
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ATH61n06088 LinkIcon - -
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ATH62n05684 LinkIcon - -
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ATH62n06376 LinkIcon - -
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ATH63n05496 LinkIcon - -
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ATH63n05754 LinkIcon - -
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ATH63n06707 LinkIcon - -
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ATH64n06328 LinkIcon - -
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ATH64n06499 LinkIcon - -
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2 adp013822 LinkIcon Positive ATH59p06387 LinkIcon PS080702 LinkIcon 0.908
1,2-Dilauroyl-sn-Glycero-3-Phosphate Monosodium Salt; MS2; QqQ; positive; CE 20 V
   1,2-Dilauroyl-sn-Glycero-3-Phosphate Monosodium Salt
  DLPA
  12
  0/12
  0PA
  Dilauroylphosphatidic acid
  1,2-Didodecanoyl phosphatidyl 1'-sn-glycerol
ATH06p06616 LinkIcon - -
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ATH09p06493 LinkIcon - -
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ATH09p06896 LinkIcon - -
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ATH11p06659 LinkIcon - -
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ATH12p06382 LinkIcon - -
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ATH13p07741 LinkIcon - -
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ATH13p07745 LinkIcon - -
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ATH14p07171 LinkIcon - -
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ATH56p06553 LinkIcon - -
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ATH57p06176 LinkIcon - -
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ATH59p06805 LinkIcon - -
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ATH62p06164 LinkIcon - -
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ATH63p06662 LinkIcon - -
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ATH63p09248 LinkIcon - -
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ATH64p09083 LinkIcon - -
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2. Gene information

No. ID Short description Curator summary Computational description
1
at1g79470
Aldolase-type TIM barrel family protein - Aldolase-type TIM barrel family protein; FUNCTIONS IN: IMP dehydrogenase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: oxidation reduction, GMP biosynthetic process, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: IMP dehydrogenase (InterPro:IPR005990), IMP dehydrogenase related (InterPro:IPR018529), Aldolase-type TIM barrel (InterPro:IPR013785), IMP dehydrogenase/GMP reductase (InterPro:IPR001093), IMP dehydrogenase / GMP reductase, conserved site (InterPro:IPR015875); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G16350.1); Has 13395 Blast hits to 12591 proteins in 2701 species: Archae - 175; Bacteria - 7357; Metazoa - 460; Fungi - 182; Plants - 88; Viruses - 2; Other Eukaryotes - 5131 (source: NCBI BLink).
2
at3g26690
nudix hydrolase homolog 13 Encodes AtNUDT13, a mitochondrial Nudix hydrolase specific for long-chain diadenosine polyphosphates. nudix hydrolase homolog 13 (NUDX13); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1216 Blast hits to 1215 proteins in 350 species: Archae - 0; Bacteria - 513; Metazoa - 242; Fungi - 111; Plants - 235; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink).
3
at5g11260
Basic-leucine zipper (bZIP) transcription factor family protein Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression. ELONGATED HYPOCOTYL 5 (HY5); FUNCTIONS IN: double-stranded DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 13 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), cAMP response element binding (CREB) protein (InterPro:IPR001630); BEST Arabidopsis thaliana protein match is: HY5-homolog (TAIR:AT3G17609.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit