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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 23 " Y:" 24 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adp003394 LinkIcon Positive ATH10p02618 LinkIcon PS061701 LinkIcon 0.971
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH12p02100 LinkIcon PS061701 LinkIcon 0.964
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH06p01583 LinkIcon PS061701 LinkIcon 0.963
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH08p01579 LinkIcon PS061701 LinkIcon 0.951
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH13p01586 LinkIcon PS061701 LinkIcon 0.951
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH11p02384 LinkIcon PS061701 LinkIcon 0.950
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH58p01625 LinkIcon PS061701 LinkIcon 0.949
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH07p02373 LinkIcon PS061701 LinkIcon 0.948
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH56p02438 LinkIcon PS061701 LinkIcon 0.942
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH63p01624 LinkIcon PS061701 LinkIcon 0.932
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH08p01844 LinkIcon PS061701 LinkIcon 0.931
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH58p02435 LinkIcon PS061701 LinkIcon 0.928
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH63p02432 LinkIcon PS061701 LinkIcon 0.928
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH14p01593 LinkIcon PS050902 LinkIcon 0.927
4-methylsulfinylbutyl glucosinolate; MS2; QqQ; positive; CE 20 V
   4-methylsulfinylbutyl glucosinolate
  4MSOB
  glucoraphanin
  4-(Methylsulfinyl)butylglucosinolate
PS061601 LinkIcon 0.926
L-beta-homotyrosine-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homotyrosine-HCl
  (S)-3-Amino-4-(4-hydroxyphenyl)butyric acid hydrochloride
ATH06p01583 LinkIcon PS039201 LinkIcon 0.919
6-Aminohexanoic acid; MS2; QqQ; positive; CE 10 V
   6-Aminohexanoic acid
  EACA
  6-Aca
  6-Ahx
  ACS
  6-Aminohexanoate
  epsilon-Amino-n-caproic acid
  Epsilcapramine
  6-Aminocaproic acid
  Acepramine
  Caprolisin
  Epsilcapramin
  Hemocaprol
  epsilon-Leucin
  Respramin
ATH08p01579 LinkIcon PS039201 LinkIcon 0.919
6-Aminohexanoic acid; MS2; QqQ; positive; CE 10 V
   6-Aminohexanoic acid
  EACA
  6-Aca
  6-Ahx
  ACS
  6-Aminohexanoate
  epsilon-Amino-n-caproic acid
  Epsilcapramine
  6-Aminocaproic acid
  Acepramine
  Caprolisin
  Epsilcapramin
  Hemocaprol
  epsilon-Leucin
  Respramin
ATH06p01583 LinkIcon PS036201 LinkIcon 0.910
trans-4-Hydroxy-L-proline; MS2; QqQ; positive; CE 10 V
   trans-4-Hydroxy-L-proline
  Hyp
  Hypro
  (2S,4R)-4-Hydroxypyrrolidine-2-carboxylic acid
  Oxaceprol
PS050905 LinkIcon 0.904
4-methylsulfinylbutyl glucosinolate; MS2; QqQ; positive; CE 50 V
   4-methylsulfinylbutyl glucosinolate
  4MSOB
  glucoraphanin
  4-(Methylsulfinyl)butylglucosinolate
ATH08p02380 LinkIcon PS061701 LinkIcon 0.903
L-beta-homovaline-HCl; MS2; QqQ; positive; CE 10 V
   L-beta-homovaline-HCl
  (R)-3-Amino-4-methylpentanoic acid hydrochloride
  L-beta-Leucine hydrochloride
  (R)-3-Amino-4-methylvaleric acid
ATH14p02394 LinkIcon PS050902 LinkIcon 0.900
4-methylsulfinylbutyl glucosinolate; MS2; QqQ; positive; CE 20 V
   4-methylsulfinylbutyl glucosinolate
  4MSOB
  glucoraphanin
  4-(Methylsulfinyl)butylglucosinolate
ATH14p02663 LinkIcon PS050902 LinkIcon 0.900
4-methylsulfinylbutyl glucosinolate; MS2; QqQ; positive; CE 20 V
   4-methylsulfinylbutyl glucosinolate
  4MSOB
  glucoraphanin
  4-(Methylsulfinyl)butylglucosinolate
ATH06p01580 LinkIcon - -
-
ATH06p02371 LinkIcon - -
-
ATH06p02882 LinkIcon - -
-
ATH07p01850 LinkIcon - -
-
ATH08p02898 LinkIcon - -
-
ATH09p02909 LinkIcon - -
-
ATH11p01861 LinkIcon - -
-
ATH11p01864 LinkIcon - -
-
ATH12p02359 LinkIcon - -
-
ATH12p02852 LinkIcon - -
-
ATH13p02386 LinkIcon - -
-
ATH14p01858 LinkIcon - -
-
ATH56p01629 LinkIcon - -
-
ATH56p01901 LinkIcon - -
-
ATH56p02713 LinkIcon - -
-
ATH57p02169 LinkIcon - -
-
ATH57p02440 LinkIcon - -
-
ATH58p01628 LinkIcon - -
-
ATH58p02960 LinkIcon - -
-
ATH61p03220 LinkIcon - -
-
ATH61p04306 LinkIcon - -
-
ATH62p01897 LinkIcon - -
-
ATH62p02725 LinkIcon - -
-
ATH63p02702 LinkIcon - -
-
ATH64p01623 LinkIcon - -
-
ATH64p01888 LinkIcon - -
-
ATH64p02696 LinkIcon - -
-
ATH64p02699 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at2g13570
LinkIcon
eFP
TAIR
nuclear factor Y, subunit B7 - "nuclear factor Y, subunit B7" (NF-YB7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Histone-fold (InterPro:IPR009072), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B3 (TAIR:AT4G14540.1); Has 1909 Blast hits to 1888 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 587; Fungi - 414; Plants - 527; Viruses - 0; Other Eukaryotes - 381 (source: NCBI BLink).
2
at4g28000
LinkIcon
eFP
TAIR
P-loop containing nucleoside triphosphate hydrolases superfamily protein - P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G52882.1); Has 39856 Blast hits to 37451 proteins in 3236 species: Archae - 1544; Bacteria - 17865; Metazoa - 4891; Fungi - 3526; Plants - 3328; Viruses - 34; Other Eukaryotes - 8668 (source: NCBI BLink).
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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit