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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Keyword
AGI locus IDs

Choosing cell X:" 23 " Y:" 5 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adp005025 LinkIcon Positive ATH14p03010 LinkIcon PS102602 LinkIcon 0.983
Trigonelline hydrochloride; MS2; QqQ; positive; CE 20 V
   Trigonelline hydrochloride
  Trigenelline
  Trigenolline
  1-Methylpyridinium-3-carboxylate
  N-Methylnicotinic acid betaine
  Gynesine
  Caffearin
  Coffearine
  Betaine nicotinate
  N-Methylnicotinate
PS010702 LinkIcon 0.943
4-Aminobenzoic acid; MS2; QqQ; positive; CE 20 V
   4-Aminobenzoic acid
  PABA
  ABEE
  Vitamin Bx
  Vitamin H1
  gamma-Aminobenzoic acid
  1-Amino-4-carboxybenzene
  4-Aminobenzoate
  Paraminol
  4-Carboxyaniline
  Amben
ATH09p02481 LinkIcon PT112580 LinkIcon 0.924
delta-Tocotrienol; MS2; Q-Tof; [M+H]+
   delta-Tocotrienol
  8-Methyltocotrienol
  (R)-delta-Tocotrienol
  (2R)-2,8-dimethyl-2-[(3E,7E)-4,8,12-trimethyltrideca-3,7,11-trienyl]chroman-6-ol
PT112530 LinkIcon 0.916
Calciferol; MS2; Q-Tof; [M+H]+
   Calciferol
  Vitamin D2
  Ergocalciferol
  Viosterin
  Osteil
  Viosterol
  Ercalciol
  Irradiated ergosterol
  Condacaps
  Condocaps
  Condol
  Crtron
  Crystallina
  Daral
  (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol
  Davitin
  Deltalin
  Deratol
  Diactol
  Drisdol
  Ergorone
  Ertron
  Fortodyl
  Geltabs
  Hyperkil
  Irradiated ergosta-5,7,22-trien-3-beta-ol
  Metadee
ATH14p03010 LinkIcon PT110260 LinkIcon 0.914
Trigonelline hydrochloride; MS2; Q-Tof; [M+H]+
   Trigonelline hydrochloride
  Trigenelline
  Trigenolline
  1-Methylpyridinium-3-carboxylate
  N-Methylnicotinic acid betaine
  Gynesine
  Caffearin
  Coffearine
  Betaine nicotinate
  N-Methylnicotinate
  1-methylpyridin-1-ium-3-carboxylate
ATH08p02977 LinkIcon PS095101 LinkIcon 0.910
N,N-Dimethylglycine hydrochloride; MS2; QqQ; positive; CE 10 V
   N,N-Dimethylglycine hydrochloride
  Dmg
  N,N-Dimethylaminoacetic acid hydrochloride
  2-dimethylaminoacetic acid hydrochloride
  N-Methylsarcosine hydrochloride
ATH14p03010 LinkIcon PS074501 LinkIcon 0.910
L-Glucono-1,5-lactone; MS2; QqQ; positive; CE 10 V
   L-Glucono-1,5-lactone
  L-Gluconolactone
ATH06p03207 LinkIcon - -
-
ATH07p03498 LinkIcon - -
-
ATH09p02478 LinkIcon - -
-
ATH09p03255 LinkIcon - -
-
ATH09p03258 LinkIcon - -
-
ATH11p02477 LinkIcon - -
-
ATH11p02742 LinkIcon - -
-
ATH11p03216 LinkIcon - -
-
ATH11p03219 LinkIcon - -
-
ATH12p03185 LinkIcon - -
-
ATH13p02476 LinkIcon - -
-
ATH13p03258 LinkIcon - -
-
ATH13p03517 LinkIcon - -
-
ATH14p02484 LinkIcon - -
-
ATH14p03278 LinkIcon - -
-
ATH14p03766 LinkIcon - -
-
ATH56p02802 LinkIcon - -
-
ATH56p03325 LinkIcon - -
-
ATH56p03617 LinkIcon - -
-
ATH57p02802 LinkIcon - -
-
ATH57p03056 LinkIcon - -
-
ATH57p03327 LinkIcon - -
-
ATH58p02524 LinkIcon - -
-
ATH58p02787 LinkIcon - -
-
ATH58p03328 LinkIcon - -
-
ATH58p03332 LinkIcon - -
-
ATH59p03310 LinkIcon - -
-
ATH59p03311 LinkIcon - -
-
ATH61p04122 LinkIcon - -
-
ATH61p04125 LinkIcon - -
-
ATH61p04917 LinkIcon - -
-
ATH61p04920 LinkIcon - -
-
ATH62p02535 LinkIcon - -
-
ATH62p02538 LinkIcon - -
-
ATH62p03316 LinkIcon - -
-
ATH62p03320 LinkIcon - -
-
ATH63p02521 LinkIcon - -
-
ATH63p02524 LinkIcon - -
-
ATH63p03044 LinkIcon - -
-
ATH63p03322 LinkIcon - -
-
ATH63p03325 LinkIcon - -
-
ATH64p02515 LinkIcon - -
-
ATH64p03050 LinkIcon - -
-
ATH64p03323 LinkIcon - -
-
ATH64p03591 LinkIcon - -
-
2 adp028410 LinkIcon Positive ATH07p10024 LinkIcon PT112530 LinkIcon 0.961
Calciferol; MS2; Q-Tof; [M+H]+
   Calciferol
  Vitamin D2
  Ergocalciferol
  Viosterin
  Osteil
  Viosterol
  Ercalciol
  Irradiated ergosterol
  Condacaps
  Condocaps
  Condol
  Crtron
  Crystallina
  Daral
  (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol
  Davitin
  Deltalin
  Deratol
  Diactol
  Drisdol
  Ergorone
  Ertron
  Fortodyl
  Geltabs
  Hyperkil
  Irradiated ergosta-5,7,22-trien-3-beta-ol
  Metadee
PT112580 LinkIcon 0.957
delta-Tocotrienol; MS2; Q-Tof; [M+H]+
   delta-Tocotrienol
  8-Methyltocotrienol
  (R)-delta-Tocotrienol
  (2R)-2,8-dimethyl-2-[(3E,7E)-4,8,12-trimethyltrideca-3,7,11-trienyl]chroman-6-ol
ATH06p10591 LinkIcon - -
-
ATH06p10817 LinkIcon - -
-
ATH11p10317 LinkIcon - -
-
ATH11p10918 LinkIcon - -
-
ATH14p11502 LinkIcon - -
-
ATH56p12880 LinkIcon - -
-
ATH56p13617 LinkIcon - -
-
ATH58p13481 LinkIcon - -
-
ATH58p13484 LinkIcon - -
-
ATH61p14647 LinkIcon - -
-
ATH63p12426 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g65510
- - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65486.1); Has 22 Blast hits to 22 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
2
at2g28990
Leucine-rich repeat protein kinase family protein - Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G28970.1); Has 164585 Blast hits to 121622 proteins in 4513 species: Archae - 85; Bacteria - 13458; Metazoa - 43809; Fungi - 9980; Plants - 78212; Viruses - 403; Other Eukaryotes - 18638 (source: NCBI BLink).
3
at2g29480
glutathione S-transferase tau 2 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase tau 2 (GSTU2); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 1 (TAIR:AT2G29490.1); Has 8866 Blast hits to 8848 proteins in 1276 species: Archae - 0; Bacteria - 4843; Metazoa - 860; Fungi - 165; Plants - 2104; Viruses - 0; Other Eukaryotes - 894 (source: NCBI BLink).
4
at2g36380
pleiotropic drug resistance 6 - pleiotropic drug resistance 6 (PDR6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
5
at2g44480
beta glucosidase 17 - beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 11437 Blast hits to 11059 proteins in 1476 species: Archae - 140; Bacteria - 7925; Metazoa - 696; Fungi - 198; Plants - 1473; Viruses - 0; Other Eukaryotes - 1005 (source: NCBI BLink).
6
at3g20960
cytochrome P450, family 705, subfamily A, polypeptide 33 member of CYP705A "cytochrome P450, family 705, subfamily A, polypeptide 33" (CYP705A33); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 18 (TAIR:AT3G20090.1); Has 32131 Blast hits to 32044 proteins in 1681 species: Archae - 52; Bacteria - 3745; Metazoa - 11369; Fungi - 6899; Plants - 8847; Viruses - 3; Other Eukaryotes - 1216 (source: NCBI BLink).
7
at3g25710
basic helix-loop-helix 32 Encodes a basic helix僕oop防elix transcription factor that is expressed in the hypophysis-adjacent embryo cells, and is required and partially sufficient for MP-dependent root initiation. Involved in response to phosphate starvation. Negative regulator of root hair development, anthocyanin formation and Pi content. basic helix-loop-helix 32 (BHLH32); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G68810.1); Has 2800 Blast hits to 2795 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 397; Fungi - 30; Plants - 2368; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
8
at3g26330
cytochrome P450, family 71, subfamily B, polypeptide 37 putative cytochrome P450 "cytochrome P450, family 71, subfamily B, polypeptide 37" (CYP71B37); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 36 (TAIR:AT3G26320.1); Has 32471 Blast hits to 32207 proteins in 1677 species: Archae - 50; Bacteria - 3065; Metazoa - 12022; Fungi - 6765; Plants - 9535; Viruses - 3; Other Eukaryotes - 1031 (source: NCBI BLink).
9
at3g61990
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G62000.1); Has 5802 Blast hits to 5800 proteins in 1542 species: Archae - 71; Bacteria - 3331; Metazoa - 279; Fungi - 165; Plants - 612; Viruses - 0; Other Eukaryotes - 1344 (source: NCBI BLink).
10
at5g18270
Arabidopsis NAC domain containing protein 87 - Arabidopsis NAC domain containing protein 87 (ANAC087); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 46 (TAIR:AT3G04060.1); Has 3027 Blast hits to 3020 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3027; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
11
at5g65210
bZIP transcription factor family protein Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated. TGA1; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 (TAIR:AT5G10030.2); Has 731 Blast hits to 729 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 693; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit