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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Keyword
AGI locus IDs

Choosing cell X:" 23 " Y:" 7 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn027325 LinkIcon Negative ATH14n04838 LinkIcon - -
-
ATH64n05763 LinkIcon - -
-
ATH64n06923 LinkIcon - -
-
2 adn032921 LinkIcon Negative ATH07n04353 LinkIcon - -
-
ATH07n04642 LinkIcon - -
-
ATH08n07243 LinkIcon - -
-
ATH08n07246 LinkIcon - -
-
ATH09n07356 LinkIcon - -
-
ATH10n04847 LinkIcon - -
-
ATH13n05741 LinkIcon - -
-
ATH13n06659 LinkIcon - -
-
ATH13n06662 LinkIcon - -
-
ATH14n05705 LinkIcon - -
-
ATH14n06274 LinkIcon - -
-
ATH56n08354 LinkIcon - -
-
ATH57n07598 LinkIcon - -
-
ATH57n08344 LinkIcon - -
-
ATH57n08845 LinkIcon - -
-
ATH58n07705 LinkIcon - -
-
ATH58n07708 LinkIcon - -
-
ATH58n08477 LinkIcon - -
-
ATH58n08480 LinkIcon - -
-
ATH59n07535 LinkIcon - -
-
ATH60n08186 LinkIcon - -
-
ATH62n07543 LinkIcon - -
-
ATH63n07433 LinkIcon - -
-
ATH63n07685 LinkIcon - -
-
ATH63n07688 LinkIcon - -
-
ATH64n07173 LinkIcon - -
-
ATH64n07894 LinkIcon - -
-
3 adn055416 LinkIcon Negative ATH08n12021 LinkIcon - -
-
ATH08n12639 LinkIcon - -
-
ATH10n09856 LinkIcon - -
-
ATH11n07330 LinkIcon - -
-
ATH56n14735 LinkIcon - -
-
ATH58n14326 LinkIcon - -
-
ATH61n12673 LinkIcon - -
-
4 adp000831 LinkIcon Positive ATH63p00027 LinkIcon PM018199 LinkIcon 1.000
Nicotinic acid; MS2; Q-TOF; M+H; 15->55V
   Nicotinic acid
ATH14p00025 LinkIcon PM018199 LinkIcon 0.996
Nicotinic acid; MS2; Q-TOF; M+H; 15->55V
   Nicotinic acid
  Isonicotinic acid
ATH63p00027 LinkIcon PM018198 LinkIcon 0.992
Isonicotinic acid; MS2; Q-TOF; M+H; 15->55V
   Isonicotinic acid
ATH14p00563 LinkIcon PS007601 LinkIcon 0.991
Nicotinic Acid; MS2; QqQ; positive; CE 10 V
   Nicotinic Acid
  Vitamin B3
  Niacin
  Nicotinate
  3-Picolinic acid
  Pyridine-3-carbonic acid
  Pellagra preventive factor
PM018199 LinkIcon 0.987
Nicotinic acid; MS2; Q-TOF; M+H; 15->55V
   Nicotinic acid
ATH14p00025 LinkIcon PS007601 LinkIcon 0.972
Nicotinic Acid; MS2; QqQ; positive; CE 10 V
   Nicotinic Acid
  Vitamin B3
  Niacin
  Nicotinate
  3-Picolinic acid
  Pyridine-3-carbonic acid
  Pellagra preventive factor
ATH14p00563 LinkIcon PM018198 LinkIcon 0.971
Isonicotinic acid; MS2; Q-TOF; M+H; 15->55V
   Isonicotinic acid
ATH63p00027 LinkIcon PS007601 LinkIcon 0.970
Nicotinic Acid; MS2; QqQ; positive; CE 10 V
   Nicotinic Acid
  Vitamin B3
  Niacin
  Nicotinate
  3-Picolinic acid
  Pyridine-3-carbonic acid
  Pellagra preventive factor
ATH14p00563 LinkIcon PT102620 LinkIcon 0.965
Isonicotinic acid; MS2; Q-Tof; [M+H]+
   Isonicotinic acid
  INA
  4-Picolinic acid
  4-Pyridinecarboxylic Acid
  4-Carboxypyridine
  pyridine-4-carboxylic acid
ATH63p00027 LinkIcon PT102620 LinkIcon 0.965
Isonicotinic acid; MS2; Q-Tof; [M+H]+
   Isonicotinic acid
  INA
  4-Picolinic acid
  4-Pyridinecarboxylic Acid
  4-Carboxypyridine
  pyridine-4-carboxylic acid
ATH14p00025 LinkIcon PT102620 LinkIcon 0.964
Isonicotinic acid; MS2; Q-Tof; [M+H]+
   Isonicotinic acid
  INA
  4-Picolinic acid
  4-Pyridinecarboxylic Acid
  4-Carboxypyridine
  pyridine-4-carboxylic acid
ATH64p00297 LinkIcon PM018199 LinkIcon 0.962
Nicotinic acid; MS2; Q-TOF; M+H; 15->55V
   Nicotinic acid
ATH14p00563 LinkIcon PS026202 LinkIcon 0.961
Isonicotinic acid; MS2; QqQ; positive; CE 20 V
   Isonicotinic acid
  INA
  4-Picolinic acid
  4-Pyridinecarboxylic Acid
  4-Carboxypyridine
ATH64p00297 LinkIcon PM018198 LinkIcon 0.958
Isonicotinic acid; MS2; Q-TOF; M+H; 15->55V
   Isonicotinic acid
ATH14p00025 LinkIcon PS026202 LinkIcon 0.952
Isonicotinic acid; MS2; QqQ; positive; CE 20 V
   Isonicotinic acid
  INA
  4-Picolinic acid
  4-Pyridinecarboxylic Acid
  4-Carboxypyridine
ATH63p00027 LinkIcon PS026202 LinkIcon 0.951
Isonicotinic acid; MS2; QqQ; positive; CE 20 V
   Isonicotinic acid
  INA
  4-Picolinic acid
  4-Pyridinecarboxylic Acid
  4-Carboxypyridine
ATH14p00563 LinkIcon PM000941 LinkIcon 0.944
L-Cysteic acid; MS2; QqQ; M+H; 18
   L-Cysteic acid
PS094302 LinkIcon 0.943
alpha-Methyl-DL-histidine dihydrochloride; MS2; QqQ; positive; CE 20 V
   alpha-Methyl-DL-histidine dihydrochloride
  alpha-Me-His
  N-alpha-Methylhistidine
  alpha-Methyl-DL-histidine dihydrochloride
  alpha-Me-His
  N-alpha-Methylhistidine
PT109430 LinkIcon 0.940
alpha-Methyl-DL-histidine dihydrochloride; MS2; Q-Tof; [M+H]+
   alpha-Methyl-DL-histidine dihydrochloride
  alpha-Me-His
  N-alpha-Methylhistidine
  2-amino-3-(3H-imidazol-4-yl)-2-methylpropanoic acid
ATH14p00025 LinkIcon PM000941 LinkIcon 0.938
L-Cysteic acid; MS2; QqQ; M+H; 18
   L-Cysteic acid
ATH14p00563 LinkIcon PM000942 LinkIcon 0.938
N3-methyl-L-histidine; MS2; QqQ; M+H; 20
   N3-methyl-L-histidine
ATH63p00027 LinkIcon PM000941 LinkIcon 0.935
L-Cysteic acid; MS2; QqQ; M+H; 18
   L-Cysteic acid
ATH14p00025 LinkIcon PS007602 LinkIcon 0.933
Nicotinic Acid; MS2; QqQ; positive; CE 20 V
   Nicotinic Acid
  Vitamin B3
  Niacin
  Nicotinate
  3-Picolinic acid
  Pyridine-3-carbonic acid
  Pellagra preventive factor
PS094303 LinkIcon 0.931
alpha-Methyl-DL-histidine dihydrochloride; MS2; QqQ; positive; CE 30 V
   alpha-Methyl-DL-histidine dihydrochloride
  alpha-Me-His
  N-alpha-Methylhistidine
ATH63p00027 LinkIcon PS007602 LinkIcon 0.931
Nicotinic Acid; MS2; QqQ; positive; CE 20 V
   Nicotinic Acid
  Vitamin B3
  Niacin
  Nicotinate
  3-Picolinic acid
  Pyridine-3-carbonic acid
  Pellagra preventive factor
ATH14p00025 LinkIcon PT109430 LinkIcon 0.930
alpha-Methyl-DL-histidine dihydrochloride; MS2; Q-Tof; [M+H]+
   alpha-Methyl-DL-histidine dihydrochloride
  alpha-Me-His
  N-alpha-Methylhistidine
  2-amino-3-(3H-imidazol-4-yl)-2-methylpropanoic acid
ATH63p00027 LinkIcon PT109430 LinkIcon 0.930
alpha-Methyl-DL-histidine dihydrochloride; MS2; Q-Tof; [M+H]+
   alpha-Methyl-DL-histidine dihydrochloride
  alpha-Me-His
  N-alpha-Methylhistidine
  2-amino-3-(3H-imidazol-4-yl)-2-methylpropanoic acid
  alpha-Methyl-DL-histidine dihydrochloride
  alpha-Me-His
  N-alpha-Methylhistidine
ATH64p00297 LinkIcon PS007601 LinkIcon 0.930
Nicotinic Acid; MS2; QqQ; positive; CE 10 V
   Nicotinic Acid
  Vitamin B3
  Niacin
  Nicotinate
  3-Picolinic acid
  Pyridine-3-carbonic acid
  Pellagra preventive factor
PT102620 LinkIcon 0.929
Isonicotinic acid; MS2; Q-Tof; [M+H]+
   Isonicotinic acid
  INA
  4-Picolinic acid
  4-Pyridinecarboxylic Acid
  4-Carboxypyridine
  pyridine-4-carboxylic acid
PM008060 LinkIcon 0.928
7-Methylthioheptylglucosinolate; MS2; QIT; M+H; 25
   7-Methylthioheptylglucosinolate
ATH14p00025 LinkIcon PS094302 LinkIcon 0.925
alpha-Methyl-DL-histidine dihydrochloride; MS2; QqQ; positive; CE 20 V
   alpha-Methyl-DL-histidine dihydrochloride
  alpha-Me-His
  N-alpha-Methylhistidine
ATH63p00027 LinkIcon PS094302 LinkIcon 0.924
alpha-Methyl-DL-histidine dihydrochloride; MS2; QqQ; positive; CE 20 V
   alpha-Methyl-DL-histidine dihydrochloride
  alpha-Me-His
  N-alpha-Methylhistidine
ATH64p00297 LinkIcon PS026202 LinkIcon 0.914
Isonicotinic acid; MS2; QqQ; positive; CE 20 V
   Isonicotinic acid
  INA
  4-Picolinic acid
  4-Pyridinecarboxylic Acid
  4-Carboxypyridine
PM000941 LinkIcon 0.900
L-Cysteic acid; MS2; QqQ; M+H; 18
   L-Cysteic acid
ATH64p00301 LinkIcon - -
-
5 adp031834 LinkIcon Positive ATH06p11504 LinkIcon - -
-
ATH08p12186 LinkIcon - -
-
ATH11p11113 LinkIcon - -
-
ATH56p13887 LinkIcon - -
-
ATH58p15151 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g55020
lipoxygenase 1 lipoxygenase, a defense gene conferring resistance Xanthomonas campestris lipoxygenase 1 (LOX1); CONTAINS InterPro DOMAIN/s: Lipoxygenase, iron binding site (InterPro:IPR020833), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: PLAT/LH2 domain-containing lipoxygenase family protein (TAIR:AT3G22400.1); Has 1484 Blast hits to 1444 proteins in 180 species: Archae - 0; Bacteria - 84; Metazoa - 533; Fungi - 49; Plants - 793; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
2
at3g11430
glycerol-3-phosphate acyltransferase 5 Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester. glycerol-3-phosphate acyltransferase 5 (GPAT5); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 7 (TAIR:AT5G06090.1); Has 397 Blast hits to 386 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
3
at5g07680
NAC domain containing protein 80 - NAC domain containing protein 80 (NAC080); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 100 (TAIR:AT5G61430.1); Has 3092 Blast hits to 3083 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3092; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit