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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 24 " Y:" 0 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn037155 LinkIcon Negative ATH06n04936 LinkIcon - -
-
ATH06n05289 LinkIcon - -
-
ATH11n04666 LinkIcon - -
-
ATH60n10069 LinkIcon - -
-
2 adn038440 LinkIcon Negative ATH10n05709 LinkIcon PS107607 LinkIcon 0.940
4-(Methylsulfinyl)but-3-enylglucosinolate; MS2; QqQ; negative; CE 10 V
   4-(Methylsulfinyl)but-3-enylglucosinolate
  Glucoraphenin
  4-Methylsufinyl-3-butenyl glucosinolate
PM018003 LinkIcon 0.908
5-Methylthio-n-pentyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   5-Methylthio-n-pentyl glucosinolate
  glucoberteroin
ATH07n05266 LinkIcon - -
-
ATH07n06237 LinkIcon - -
-
ATH11n04534 LinkIcon - -
-
ATH13n08052 LinkIcon - -
-
ATH14n07159 LinkIcon - -
-
ATH57n09583 LinkIcon - -
-
ATH59n09532 LinkIcon - -
-
ATH59n10026 LinkIcon - -
-
ATH60n08950 LinkIcon - -
-
ATH60n09654 LinkIcon - -
-
ATH63n08720 LinkIcon - -
-
ATH63n09485 LinkIcon - -
-
3 adp001975 LinkIcon Positive ATH11p01673 LinkIcon - -
-
ATH12p02169 LinkIcon - -
-
4 adp007924 LinkIcon Positive ATH56p04649 LinkIcon - -
-
ATH58p04789 LinkIcon - -
-
ATH58p05101 LinkIcon - -
-
ATH61p06139 LinkIcon - -
-
ATH63p05095 LinkIcon - -
-
5 adp012361 LinkIcon Positive ATH08p06469 LinkIcon - -
-
ATH13p07631 LinkIcon - -
-
ATH14p06488 LinkIcon - -
-
ATH14p07367 LinkIcon - -
-
ATH63p08524 LinkIcon - -
-
ATH64p07136 LinkIcon - -
-
ATH64p08146 LinkIcon - -
-
ATH64p08147 LinkIcon - -
-
6 adp019909 LinkIcon Positive ATH06p08772 LinkIcon PT101280 LinkIcon 0.927
Leupeptin hemisulfate salt; MS2; Q-Tof; [M+H]+
   Leupeptin hemisulfate salt
  Acetyl-Leu-Leu-Arg-al
  N-Acetyl-L-leucyl-L-leucyl-L-argininal hemisulfate salt
  2-[[(2S)-2-acetamido-4-methylpentanoyl]amino]-N-[5-(diaminomethylideneamino)-1-oxopentan-2-yl]-4-methylpentanamide
PS012801 LinkIcon 0.907
Leupeptin hemisulfate salt; MS2; QqQ; positive; CE 10 V
   Leupeptin hemisulfate salt
  Acetyl-Leu-Leu-Arg-al
  N-Acetyl-L-leucyl-L-leucyl-L-argininal hemisulfate salt
ATH07p07759 LinkIcon - -
-
ATH08p09111 LinkIcon - -
-
ATH09p08188 LinkIcon - -
-
ATH09p08929 LinkIcon - -
-
ATH10p08082 LinkIcon - -
-
ATH12p07880 LinkIcon - -
-
ATH14p09482 LinkIcon - -
-
ATH14p09632 LinkIcon - -
-
ATH58p10678 LinkIcon - -
-
ATH58p10889 LinkIcon - -
-
ATH59p08453 LinkIcon - -
-
ATH59p08861 LinkIcon - -
-
ATH61p10139 LinkIcon - -
-
ATH63p08712 LinkIcon - -
-
ATH64p10870 LinkIcon - -
-
ATH64p11530 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at2g30750
cytochrome P450, family 71, subfamily A, polypeptide 12 putative cytochrome P450 cytochrome P450, family 71, subfamily A, polypeptide 12 (CYP71A12); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to bacterium; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 13 (TAIR:AT2G30770.1); Has 34196 Blast hits to 33993 proteins in 1718 species: Archae - 48; Bacteria - 4046; Metazoa - 11921; Fungi - 7292; Plants - 9674; Viruses - 3; Other Eukaryotes - 1212 (source: NCBI BLink).
2
at2g43590
Chitinase family protein - Chitinase family protein; FUNCTIONS IN: chitin binding, chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43580.1); Has 2744 Blast hits to 2502 proteins in 524 species: Archae - 0; Bacteria - 615; Metazoa - 34; Fungi - 202; Plants - 1760; Viruses - 20; Other Eukaryotes - 113 (source: NCBI BLink).
3
at3g21680
- - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
4
at4g19690
iron-regulated transporter 1 Fe(II) transport protein (IRT1) iron-regulated transporter 1 (IRT1); FUNCTIONS IN: manganese ion transmembrane transporter activity, zinc ion transmembrane transporter activity, cadmium ion transmembrane transporter activity, copper uptake transmembrane transporter activity, iron ion transmembrane transporter activity; INVOLVED IN: in 11 processes; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron regulated transporter 2 (TAIR:AT4G19680.2); Has 937 Blast hits to 936 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 53; Fungi - 387; Plants - 413; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
5
at4g31940
cytochrome P450, family 82, subfamily C, polypeptide 4 member of CYP82C "cytochrome P450, family 82, subfamily C, polypeptide 4" (CYP82C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 82, subfamily C, polypeptide 2 (TAIR:AT4G31970.1); Has 33616 Blast hits to 33393 proteins in 1726 species: Archae - 49; Bacteria - 3806; Metazoa - 11816; Fungi - 7242; Plants - 9457; Viruses - 3; Other Eukaryotes - 1243 (source: NCBI BLink).
6
at5g36140
cytochrome P450, family 716, subfamily A, polypeptide 2 member of CYP716A "cytochrome P450, family 716, subfamily A, polypeptide 2" (CYP716A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 1 (TAIR:AT5G36110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
7
at5g56080
nicotianamine synthase 2 Encodes a protein with nicotianamine synthase activity. Its transcript levels rise in roots in response to zinc deficiency and rise in leaves in response to elevated levels of zinc. nicotianamine synthase 2 (NAS2); CONTAINS InterPro DOMAIN/s: Nicotianamine synthase (InterPro:IPR004298); BEST Arabidopsis thaliana protein match is: nicotianamine synthase 1 (TAIR:AT5G04950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit