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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Keyword
AGI locus IDs

Choosing cell X:" 25 " Y:" 25 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn037053 LinkIcon Negative ATH08n08619 LinkIcon PM018085 LinkIcon 0.988
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH06n05351 LinkIcon PM018085 LinkIcon 0.987
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH08n08432 LinkIcon PM018085 LinkIcon 0.987
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH06n05354 LinkIcon PM018085 LinkIcon 0.986
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH08n07996 LinkIcon PM018085 LinkIcon 0.986
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH06n04996 LinkIcon PM018085 LinkIcon 0.972
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH06n04993 LinkIcon PM018085 LinkIcon 0.966
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH56n09404 LinkIcon PM018085 LinkIcon 0.942
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH58n10295 LinkIcon PM018085 LinkIcon 0.929
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH08n08873 LinkIcon PM018085 LinkIcon 0.927
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH56n09903 LinkIcon PM018085 LinkIcon 0.921
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH58n09530 LinkIcon PM018085 LinkIcon 0.918
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH56n09900 LinkIcon PM018085 LinkIcon 0.913
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH56n09648 LinkIcon PM018085 LinkIcon 0.910
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH58n10043 LinkIcon PM018085 LinkIcon 0.906
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH58n09533 LinkIcon PM018085 LinkIcon 0.904
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH11n04545 LinkIcon - -
-
ATH11n05097 LinkIcon - -
-
ATH13n07383 LinkIcon - -
-
ATH13n08065 LinkIcon - -
-
ATH63n08732 LinkIcon - -
-
ATH63n09499 LinkIcon - -
-
2 adn037055 LinkIcon Negative ATH06n04790 LinkIcon PM018085 LinkIcon 0.998
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH06n05354 LinkIcon PM018085 LinkIcon 0.986
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH08n07996 LinkIcon PM018085 LinkIcon 0.986
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH56n09404 LinkIcon PM018085 LinkIcon 0.942
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH08n08873 LinkIcon PM018085 LinkIcon 0.927
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH56n09903 LinkIcon PM018085 LinkIcon 0.921
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH58n10043 LinkIcon PM018085 LinkIcon 0.906
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH58n09533 LinkIcon PM018085 LinkIcon 0.904
Spermidine-diferuloyl; MS2; Q-TOF; M-H; 15->55V
   Spermidine-diferuloyl
ATH11n04545 LinkIcon - -
-
ATH11n05097 LinkIcon - -
-
ATH13n07383 LinkIcon - -
-
ATH13n08065 LinkIcon - -
-
ATH61n08684 LinkIcon - -
-
ATH63n08732 LinkIcon - -
-
ATH63n09499 LinkIcon - -
-
ATH64n09153 LinkIcon - -
-
3 adp016960 LinkIcon Positive ATH08p07600 LinkIcon PM018172 LinkIcon 0.993
Spermidine-diferuloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-diferuloyl
  Spermidine-diferuloyl
ATH06p07895 LinkIcon PM018172 LinkIcon 0.980
Spermidine-diferuloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-diferuloyl
  Spermidine-diferuloyl
ATH08p08184 LinkIcon PM018172 LinkIcon 0.977
Spermidine-diferuloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-diferuloyl
  Spermidine-diferuloyl
ATH06p07391 LinkIcon PM018173 LinkIcon 0.976
Spermidine-diferuloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-diferuloyl
  Spermidine-diferuloyl
ATH56p07907 LinkIcon PM018173 LinkIcon 0.952
Spermidine-diferuloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-diferuloyl
  Spermidine-diferuloyl
ATH08p07876 LinkIcon PM018173 LinkIcon 0.947
Spermidine-diferuloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-diferuloyl
  Spermidine-diferuloyl
ATH08p08187 LinkIcon PM018172 LinkIcon 0.947
Spermidine-diferuloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-diferuloyl
  Spermidine-diferuloyl
ATH56p07584 LinkIcon PM018173 LinkIcon 0.940
Spermidine-diferuloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-diferuloyl
  Spermidine-diferuloyl
ATH11p07370 LinkIcon PM018172 LinkIcon 0.937
Spermidine-diferuloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-diferuloyl
  Spermidine-diferuloyl
ATH56p07304 LinkIcon PM018172 LinkIcon 0.935
Spermidine-diferuloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-diferuloyl
  Spermidine-diferuloyl
ATH58p09766 LinkIcon PM018172 LinkIcon 0.926
Spermidine-diferuloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-diferuloyl
  Spermidine-diferuloyl
ATH06p07898 LinkIcon PM018172 LinkIcon 0.916
Spermidine-diferuloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-diferuloyl
  Spermidine-diferuloyl
ATH11p07879 LinkIcon - -
-
ATH56p08205 LinkIcon - -
-
ATH57p07741 LinkIcon - -
-
ATH58p08742 LinkIcon - -
-
ATH58p09239 LinkIcon - -
-
ATH58p09505 LinkIcon - -
-
ATH59p07861 LinkIcon - -
-
ATH61p08919 LinkIcon - -
-
ATH61p09498 LinkIcon - -
-
ATH62p06911 LinkIcon - -
-
ATH62p07187 LinkIcon - -
-
ATH63p08294 LinkIcon - -
-
4 adp024696 LinkIcon Positive ATH06p09669 LinkIcon - -
-
ATH06p10112 LinkIcon - -
-
ATH08p10873 LinkIcon - -
-
ATH09p10083 LinkIcon - -
-
ATH56p10773 LinkIcon - -
-
ATH56p11557 LinkIcon - -
-
ATH59p10381 LinkIcon - -
-
ATH61p12607 LinkIcon - -
-
ATH62p10178 LinkIcon - -
-
ATH64p13360 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g15360
Integrase-type DNA-binding superfamily protein Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2. SHINE 1 (SHN1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25390.2); Has 5918 Blast hits to 5765 proteins in 265 species: Archae - 0; Bacteria - 6; Metazoa - 9; Fungi - 23; Plants - 5843; Viruses - 2; Other Eukaryotes - 35 (source: NCBI BLink).
2
at1g23240
Caleosin-related family protein - Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 60; Plants - 279; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
3
at1g28430
cytochrome P450, family 705, subfamily A, polypeptide 24 member of CYP705A "cytochrome P450, family 705, subfamily A, polypeptide 24" (CYP705A24); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 1 (TAIR:AT4G15330.1); Has 32235 Blast hits to 32061 proteins in 1649 species: Archae - 48; Bacteria - 2998; Metazoa - 11594; Fungi - 7262; Plants - 9240; Viruses - 6; Other Eukaryotes - 1087 (source: NCBI BLink).
4
at2g23800
geranylgeranyl pyrophosphate synthase 2 encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthase geranylgeranyl pyrophosphate synthase 2 (GGPS2); CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase-related (InterPro:IPR017446), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: geranylgeranyl pyrophosphate synthase 4 (TAIR:AT2G18640.1); Has 16682 Blast hits to 16674 proteins in 2948 species: Archae - 341; Bacteria - 9381; Metazoa - 343; Fungi - 516; Plants - 473; Viruses - 12; Other Eukaryotes - 5616 (source: NCBI BLink).
5
at3g52810
purple acid phosphatase 21 - purple acid phosphatase 21 (PAP21); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, fruit, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2230 Blast hits to 2213 proteins in 478 species: Archae - 3; Bacteria - 838; Metazoa - 257; Fungi - 79; Plants - 752; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink).
6
at5g07540
glycine-rich protein 16 encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12). glycine-rich protein 16 (GRP16); CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: glycine rich protein 17 (TAIR:AT5G07530.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit