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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Keyword
AGI locus IDs

Choosing cell X:" 25 " Y:" 3 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn011428 LinkIcon Negative ATH06n01113 LinkIcon PS107411 LinkIcon 0.944
3-(Methylsulfinyl)propylglucosinolate; MS2; QqQ; negative; CE 50 V
   3-(Methylsulfinyl)propylglucosinolate
  Glucoiberin
  3-Methylsulfinylpropyl glucosinolate
  beta-D-Glucopyranose,1-thio-,1-(4-(methylsulfinyl)-N-(sulfooxy)butanimidate)
  4-methylsulfinylbutyl glucosinolate
  4MSOB
  glucoraphanin
  4-(Methylsulfinyl)butylglucosinolate
PS108210 LinkIcon 0.926
(2R)-2-Hydroxy-2-phenethylglucosinolate; MS2; QqQ; negative; CE 40 V
   (2R)-2-Hydroxy-2-phenethylglucosinolate
  Glucosibarin
PS050911 LinkIcon 0.919
4-methylsulfinylbutyl glucosinolate; MS2; QqQ; negative; CE 50 V
   4-methylsulfinylbutyl glucosinolate
  4MSOB
  glucoraphanin
  4-(Methylsulfinyl)butylglucosinolate
  3-(Methylsulfinyl)propylglucosinolate
  Glucoiberin
  3-Methylsulfinylpropyl glucosinolate
  beta-D-Glucopyranose,1-thio-,1-(4-(methylsulfinyl)-N-(sulfooxy)butanimidate)
ATH08n01271 LinkIcon - -
-
ATH14n01193 LinkIcon - -
-
ATH14n01849 LinkIcon - -
-
ATH14n02303 LinkIcon - -
-
ATH56n02021 LinkIcon - -
-
ATH56n02801 LinkIcon - -
-
ATH57n02013 LinkIcon - -
-
ATH57n02258 LinkIcon - -
-
ATH61n01654 LinkIcon - -
-
ATH61n02130 LinkIcon - -
-
ATH62n01868 LinkIcon - -
-
ATH62n02387 LinkIcon - -
-
ATH64n01335 LinkIcon - -
-
ATH64n02092 LinkIcon - -
-
2 adn058951 LinkIcon Negative ATH12n07003 LinkIcon PM018050 LinkIcon 0.974
Kaempferol-trirhamnoside; MS2; Q-TOF; M-H; 15->55V
   Kaempferol-trirhamnoside
ATH09n12641 LinkIcon - -
-
ATH09n13205 LinkIcon - -
-
ATH12n07184 LinkIcon - -
-
ATH13n11562 LinkIcon - -
-
ATH13n12505 LinkIcon - -
-
ATH56n15206 LinkIcon - -
-
ATH62n14114 LinkIcon - -
-
3 adp003262 LinkIcon Positive ATH07p02687 LinkIcon PS103601 LinkIcon 0.964
DL-mandelic acid; MS2; QqQ; positive; CE 10 V
   DL-mandelic acid
  DL-mandelate
  DL-alpha-Hydroxyphenylacetic acid
  DL-alpha-Hydroxybenzeneacetic acid
  DL-alpha-Oxybenzeneacetic acid
  Phenylglycollic acid
  alpha-Hydroxy-alpha-toluic acid
  Almond acid
  Amygdalinic acid
  Paramandelic acid
  Uromaline
ATH14p01910 LinkIcon PM018131 LinkIcon 0.942
Scopolin; MS2; Q-TOF; M+H; 15->55V
   Scopolin
  7-beta-glucosylscopoletin
PT112480 LinkIcon 0.935
Scopoletin; MS2; Q-Tof; [M+H]+
   Scopoletin
  6-Methoxyumbelliferone
  beta-Methylesculetin
  7-Hydroxy-5-methoxycoumarin
  6-Methoxy-7-hydroxycoumarin
  Chrysatropic acid
  Escopoletin
  Esculetin-6-methyl ether
  Gelseminic acid
  Methylesculetin
  7-Hydroxy-6-methoxy-2H-1-benzopyran-2-one
  Murrayetin
  Scopoletine
  Scopoletol
  7-hydroxy-6-methoxychromen-2-one
ATH07p02687 LinkIcon PS053401 LinkIcon 0.934
D-(+)-Arabitol; MS2; QqQ; positive; CE 10 V
   D-(+)-Arabitol
  D-Arabinitol
  D-arabinitol
  D-Arabinol
  D-Lyxitol
ATH14p01910 LinkIcon PM018132 LinkIcon 0.927
Malonylscopolin; MS2; Q-TOF; M+H; 15->55V
   Malonylscopolin
ATH14p02712 LinkIcon PM018131 LinkIcon 0.913
Scopolin; MS2; Q-TOF; M+H; 15->55V
   Scopolin
  7-beta-glucosylscopoletin
ATH07p02687 LinkIcon PS099501 LinkIcon 0.911
2-Hydroxyphenylacetic acid; MS2; QqQ; positive; CE 10 V
   2-Hydroxyphenylacetic acid
  2-Hydroxyphenylacetate
  2-Hydroxy-2-phenylacetic Acid
ATH14p02712 LinkIcon PT112480 LinkIcon 0.902
Scopoletin; MS2; Q-Tof; [M+H]+
   Scopoletin
  6-Methoxyumbelliferone
  beta-Methylesculetin
  7-Hydroxy-5-methoxycoumarin
  6-Methoxy-7-hydroxycoumarin
  Chrysatropic acid
  Escopoletin
  Esculetin-6-methyl ether
  Gelseminic acid
  Methylesculetin
  7-Hydroxy-6-methoxy-2H-1-benzopyran-2-one
  Murrayetin
  Scopoletine
  Scopoletol
  7-hydroxy-6-methoxychromen-2-one
PM018132 LinkIcon 0.901
Malonylscopolin; MS2; Q-TOF; M+H; 15->55V
   Malonylscopolin
ATH06p02419 LinkIcon - -
-
ATH11p01910 LinkIcon - -
-
ATH12p01620 LinkIcon - -
-
ATH13p02958 LinkIcon - -
-
ATH14p01907 LinkIcon - -
-
ATH14p02709 LinkIcon - -
-
ATH56p02213 LinkIcon - -
-
ATH57p02487 LinkIcon - -
-
ATH58p01674 LinkIcon - -
-
ATH58p03011 LinkIcon - -
-
ATH61p04080 LinkIcon - -
-
ATH62p02210 LinkIcon - -
-
ATH62p02213 LinkIcon - -
-
ATH62p02773 LinkIcon - -
-
ATH64p01669 LinkIcon - -
-
ATH64p01672 LinkIcon - -
-
ATH64p02746 LinkIcon - -
-
ATH64p03006 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g78000
sulfate transporter 1;2 Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes. sulfate transporter 1;2 (SULTR1;2); CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 1;3 (TAIR:AT1G22150.1); Has 10127 Blast hits to 10032 proteins in 1879 species: Archae - 35; Bacteria - 6193; Metazoa - 1167; Fungi - 451; Plants - 560; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink).
2
at2g01430
homeobox-leucine zipper protein 17 - homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink).
3
at2g22770
basic helix-loop-helix (bHLH) DNA-binding superfamily protein regulates the development of ER bodies. also involves in response to the endophytic fungus Piriformospora indica. NAI1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1); Has 3457 Blast hits to 3451 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 69; Plants - 3252; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
4
at5g24090
chitinase A Chitinase A (class III) expressed exclusively under environmental stress conditions. chitinase A (CHIA); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to salt stress, response to cold, cellular response to water deprivation, response to wounding, response to light intensity; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, chitinase active site (InterPro:IPR001579), Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit