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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Keyword
AGI locus IDs

Choosing cell X:" 27 " Y:" 4 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn002418 LinkIcon Negative ATH06n00016 LinkIcon PS028708 LinkIcon 0.994
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH06n00018 LinkIcon PS028708 LinkIcon 0.994
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH08n00362 LinkIcon PS028708 LinkIcon 0.994
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH10n00015 LinkIcon PS028708 LinkIcon 0.994
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH11n00016 LinkIcon PS028708 LinkIcon 0.994
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH13n00019 LinkIcon PS028708 LinkIcon 0.994
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH14n00022 LinkIcon PS028708 LinkIcon 0.994
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH14n00025 LinkIcon PS028708 LinkIcon 0.994
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH64n00033 LinkIcon PS028708 LinkIcon 0.990
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH58n00034 LinkIcon PS028708 LinkIcon 0.988
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH56n00034 LinkIcon PS028708 LinkIcon 0.984
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH59n00032 LinkIcon PS028708 LinkIcon 0.975
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH58n00038 LinkIcon PS028708 LinkIcon 0.958
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH64n00036 LinkIcon PS028708 LinkIcon 0.945
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH63n00032 LinkIcon PS028708 LinkIcon 0.916
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH56n00038 LinkIcon - -
-
ATH60n00031 LinkIcon - -
-
2 adp031927 LinkIcon Positive ATH13p13515 LinkIcon PM018139 LinkIcon 0.967
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH56p13856 LinkIcon PM018139 LinkIcon 0.951
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH06p11764 LinkIcon PM018134 LinkIcon 0.950
Isorhamnetin-3,7-dirhamnoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3,7-dirhamnoside
ATH13p13515 LinkIcon PT109310 LinkIcon 0.947
Quercetin-3-Galactoside-6-Rhamnoside-3'''-Rhamnoside; MS2; Q-Tof; [M+H]+
   Quercetin-3-Galactoside-6''-Rhamnoside-3'''-Rhamnoside
  Quer-3-Gal-6''-Rha-3'''-Rha
ATH06p11763 LinkIcon PM018134 LinkIcon 0.943
Isorhamnetin-3,7-dirhamnoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3,7-dirhamnoside
ATH58p15120 LinkIcon PM018139 LinkIcon 0.939
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH13p13515 LinkIcon PT109140 LinkIcon 0.933
Isorhamnetin-3-Glucoside-4'-Glucoside; MS2; Q-Tof; [M+H]+
   Isorhamnetin-3-Glucoside-4'-Glucoside
  Isor-3-Glc-4'-Glc
  Isorhamnetin 3,4'-diglucoside
  Dactylin
  Dactilin
ATH64p15310 LinkIcon PM018139 LinkIcon 0.931
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH56p13859 LinkIcon PM018134 LinkIcon 0.928
Isorhamnetin-3,7-dirhamnoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3,7-dirhamnoside
ATH63p16219 LinkIcon PM018134 LinkIcon 0.928
Isorhamnetin-3,7-dirhamnoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3,7-dirhamnoside
ATH06p11763 LinkIcon PM018139 LinkIcon 0.927
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH08p11886 LinkIcon PM018139 LinkIcon 0.925
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH13p13515 LinkIcon PS041003 LinkIcon 0.925
Rhamnetin; MS2; QqQ; positive; CE 30 V
   Rhamnetin
  Ramn
  3,3',4',5-tetrahydroxy-7-methoxyflavone
  beta-Rhamnocitrin
  7-Methoxyquercetin
  7-methylquercetin
  Quercetin 7-methyl ether
  4H-1-Benzopyran-4-one, 2-(3,4-dihydroxyphenyl)-3,5-dihydroxy-7-methoxy-
ATH56p13856 LinkIcon PT109310 LinkIcon 0.925
Quercetin-3-Galactoside-6-Rhamnoside-3'''-Rhamnoside; MS2; Q-Tof; [M+H]+
   Quercetin-3-Galactoside-6''-Rhamnoside-3'''-Rhamnoside
  Quer-3-Gal-6''-Rha-3'''-Rha
ATH06p11764 LinkIcon PM018139 LinkIcon 0.921
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH13p13515 LinkIcon PM015362 LinkIcon 0.921
Petunidin 3-O-(6-O-p-coumaroyl)glucoside; MS2; QqQ; M+; n.d.
   Petunidin 3-O-(6-O-p-coumaroyl)glucoside
  isorhamnetin-3-O-glucoside
  Isor-3-Glc
  Isorhamnetin-3-beta-D-galactopyranoside
  5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
PS031204 LinkIcon 0.920
n-Propionyl coenzyme A lithium salt; MS2; QqQ; positive; CE 40 V
   n-Propionyl coenzyme A lithium salt
  propionyl-CoA
PS041002 LinkIcon 0.919
Rhamnetin; MS2; QqQ; positive; CE 20 V
   Rhamnetin
  Ramn
  3,3',4',5-tetrahydroxy-7-methoxyflavone
  beta-Rhamnocitrin
  7-Methoxyquercetin
  7-methylquercetin
  Quercetin 7-methyl ether
  4H-1-Benzopyran-4-one, 2-(3,4-dihydroxyphenyl)-3,5-dihydroxy-7-methoxy-
PM018140 LinkIcon 0.916
Isorhamnetin-dihexoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-dihexoside
ATH14p12114 LinkIcon PM018134 LinkIcon 0.915
Isorhamnetin-3,7-dirhamnoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3,7-dirhamnoside
ATH58p14717 LinkIcon PM018139 LinkIcon 0.913
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH13p13515 LinkIcon PS031205 LinkIcon 0.912
n-Propionyl coenzyme A lithium salt; MS2; QqQ; positive; CE 50 V
   n-Propionyl coenzyme A lithium salt
  propionyl-CoA
ATH56p13856 LinkIcon PT109140 LinkIcon 0.912
Isorhamnetin-3-Glucoside-4'-Glucoside; MS2; Q-Tof; [M+H]+
   Isorhamnetin-3-Glucoside-4'-Glucoside
  Isor-3-Glc-4'-Glc
  Isorhamnetin 3,4'-diglucoside
  Dactylin
  Dactilin
ATH08p11886 LinkIcon PT109310 LinkIcon 0.910
Quercetin-3-Galactoside-6-Rhamnoside-3'''-Rhamnoside; MS2; Q-Tof; [M+H]+
   Quercetin-3-Galactoside-6''-Rhamnoside-3'''-Rhamnoside
  Quer-3-Gal-6''-Rha-3'''-Rha
ATH56p13856 LinkIcon PS031204 LinkIcon 0.909
n-Propionyl coenzyme A lithium salt; MS2; QqQ; positive; CE 40 V
   n-Propionyl coenzyme A lithium salt
  propionyl-CoA
PS041003 LinkIcon 0.907
Rhamnetin; MS2; QqQ; positive; CE 30 V
   Rhamnetin
  Ramn
  3,3',4',5-tetrahydroxy-7-methoxyflavone
  beta-Rhamnocitrin
  7-Methoxyquercetin
  7-methylquercetin
  Quercetin 7-methyl ether
  4H-1-Benzopyran-4-one, 2-(3,4-dihydroxyphenyl)-3,5-dihydroxy-7-methoxy-
PS031205 LinkIcon 0.906
n-Propionyl coenzyme A lithium salt; MS2; QqQ; positive; CE 50 V
   n-Propionyl coenzyme A lithium salt
  propionyl-CoA
  isorhamnetin-3-rutinoside
  Isor-3-Glc-6''-Rha
  Isorhamnetin-3-Glucoside-6''-Rhamnoside
  Narcissin
  Narcissoside
  Isorhamnetin-3-rhamnoglucoside
ATH58p15120 LinkIcon PM018134 LinkIcon 0.905
Isorhamnetin-3,7-dirhamnoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3,7-dirhamnoside
ATH64p15310 LinkIcon PM018134 LinkIcon 0.903
Isorhamnetin-3,7-dirhamnoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3,7-dirhamnoside
ATH56p13856 LinkIcon PS041002 LinkIcon 0.901
Rhamnetin; MS2; QqQ; positive; CE 20 V
   Rhamnetin
  Ramn
  3,3',4',5-tetrahydroxy-7-methoxyflavone
  beta-Rhamnocitrin
  7-Methoxyquercetin
  7-methylquercetin
  Quercetin 7-methyl ether
  4H-1-Benzopyran-4-one, 2-(3,4-dihydroxyphenyl)-3,5-dihydroxy-7-methoxy-
  isorhamnetin-3-O-glucoside
  Isor-3-Glc
  Isorhamnetin-3-beta-D-galactopyranoside
  5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)-3-[(2S,3R,4S
ATH08p11882 LinkIcon - -
-
ATH14p12315 LinkIcon - -
-
ATH59p12749 LinkIcon - -
-
ATH64p14950 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g05700
Leucine-rich repeat transmembrane protein kinase protein - Leucine-rich repeat transmembrane protein kinase protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, stem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase protein (TAIR:AT4G29990.1); Has 163331 Blast hits to 124125 proteins in 4749 species: Archae - 121; Bacteria - 14440; Metazoa - 44652; Fungi - 9862; Plants - 74464; Viruses - 498; Other Eukaryotes - 19294 (source: NCBI BLink).
2
at1g14070
fucosyltransferase 7 member of Xyloglucan fucosyltransferase family fucosyltransferase 7 (FUT7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: cell wall biogenesis; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: stem, cauline leaf, root; CONTAINS InterPro DOMAIN/s: Xyloglucan fucosyltransferase (InterPro:IPR004938); BEST Arabidopsis thaliana protein match is: fucosyltransferase 6 (TAIR:AT1G14080.1); Has 333 Blast hits to 324 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 330; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
3
at1g16440
root hair specific 3 - root hair specific 3 (RSH3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: root hair; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: AGC kinase 1.7 (TAIR:AT1G79250.2); Has 101577 Blast hits to 89577 proteins in 2716 species: Archae - 38; Bacteria - 12727; Metazoa - 39279; Fungi - 11275; Plants - 19035; Viruses - 382; Other Eukaryotes - 18841 (source: NCBI BLink).
4
at1g22550
Major facilitator superfamily protein - Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G22570.1); Has 7743 Blast hits to 7641 proteins in 1463 species: Archae - 0; Bacteria - 4037; Metazoa - 494; Fungi - 461; Plants - 2187; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink).
5
at1g53270
ABC-2 type transporter family protein - ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G13610.1); Has 412109 Blast hits to 371848 proteins in 4161 species: Archae - 7411; Bacteria - 324065; Metazoa - 9151; Fungi - 7073; Plants - 5804; Viruses - 6; Other Eukaryotes - 58599 (source: NCBI BLink).
6
at1g62660
Glycosyl hydrolases family 32 protein - Glycosyl hydrolases family 32 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3357 (InterPro:IPR021792), Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT1G12240.1); Has 4144 Blast hits to 4103 proteins in 1239 species: Archae - 18; Bacteria - 2530; Metazoa - 92; Fungi - 278; Plants - 1040; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).
7
at1g63450
root hair specific 8 - root hair specific 8 (RHS8); FUNCTIONS IN: catalytic activity; LOCATED IN: membrane; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G41250.1); Has 717 Blast hits to 713 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
8
at1g71530
Protein kinase superfamily protein - Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G33770.1); Has 124162 Blast hits to 122846 proteins in 4565 species: Archae - 95; Bacteria - 14009; Metazoa - 46727; Fungi - 12540; Plants - 30579; Viruses - 427; Other Eukaryotes - 19785 (source: NCBI BLink).
9
at1g79320
metacaspase 6 - metacaspase 6 (MC6); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 5 (TAIR:AT1G79330.1); Has 1177 Blast hits to 1175 proteins in 293 species: Archae - 4; Bacteria - 354; Metazoa - 0; Fungi - 270; Plants - 306; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink).
10
at2g34500
cytochrome P450, family 710, subfamily A, polypeptide 1 Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze in the presence of NADPH the conversion of β-sitosterol to stigmasterol, but not that of 24-epi-campesterol to brassicasterol (unlike CYP710A2). cytochrome P450, family 710, subfamily A, polypeptide 1 (CYP710A1); FUNCTIONS IN: C-22 sterol desaturase activity, oxygen binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 710, subfamily A, polypeptide 2 (TAIR:AT2G34490.1); Has 25674 Blast hits to 25623 proteins in 1435 species: Archae - 46; Bacteria - 2777; Metazoa - 10394; Fungi - 4411; Plants - 7239; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink).
11
at2g36290
alpha/beta-Hydrolases superfamily protein - alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74300.1); Has 970 Blast hits to 968 proteins in 224 species: Archae - 20; Bacteria - 476; Metazoa - 0; Fungi - 77; Plants - 313; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
12
at2g37130
Peroxidase superfamily protein - Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: defense response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G21960.1); Has 3882 Blast hits to 3863 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 40; Plants - 3803; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
13
at2g41970
Protein kinase superfamily protein - Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G59350.2); Has 104388 Blast hits to 103490 proteins in 4408 species: Archae - 91; Bacteria - 12474; Metazoa - 38816; Fungi - 7787; Plants - 30601; Viruses - 278; Other Eukaryotes - 14341 (source: NCBI BLink).
14
at3g11340
UDP-Glycosyltransferase superfamily protein - UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76C1 (TAIR:AT5G05870.1); Has 7583 Blast hits to 7530 proteins in 440 species: Archae - 0; Bacteria - 352; Metazoa - 2017; Fungi - 25; Plants - 5047; Viruses - 86; Other Eukaryotes - 56 (source: NCBI BLink).
15
at3g46900
copper transporter 2 encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast copper transporter 2 (COPT2); FUNCTIONS IN: copper ion transmembrane transporter activity, high affinity copper ion transmembrane transporter activity; INVOLVED IN: copper ion transport, high-affinity copper ion transport; LOCATED IN: anchored to plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: Ctr copper transporter family (TAIR:AT2G26975.1); Has 445 Blast hits to 445 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 45; Plants - 164; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
16
at3g51330
Eukaryotic aspartyl protease family protein - Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, 4 leaf senescence stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G51350.1); Has 2269 Blast hits to 2259 proteins in 198 species: Archae - 0; Bacteria - 13; Metazoa - 189; Fungi - 203; Plants - 1703; Viruses - 2; Other Eukaryotes - 159 (source: NCBI BLink).
17
at3g60330
H(+)-ATPase 7 - H(+)-ATPase 7 (HA7); FUNCTIONS IN: hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 11 (TAIR:AT5G62670.1); Has 36630 Blast hits to 33048 proteins in 3192 species: Archae - 688; Bacteria - 23362; Metazoa - 3842; Fungi - 2517; Plants - 1863; Viruses - 3; Other Eukaryotes - 4355 (source: NCBI BLink).
18
at3g62270
HCO3- transporter family - HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT2G47160.1); Has 2572 Blast hits to 1412 proteins in 199 species: Archae - 0; Bacteria - 14; Metazoa - 1904; Fungi - 316; Plants - 231; Viruses - 2; Other Eukaryotes - 105 (source: NCBI BLink).
19
at4g18360
Aldolase-type TIM barrel family protein - Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
20
at5g14130
Peroxidase superfamily protein - Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, fruit, root; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G37530.1); Has 4547 Blast hits to 4517 proteins in 291 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 177; Plants - 4298; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
21
at5g43690
P-loop containing nucleoside triphosphate hydrolases superfamily protein - P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
22
at5g51060
NADPH/respiratory burst oxidase protein D RHD2 (along with RHD3 and RHD4) is required for normal root hair elongation. Has NADPH oxidase activity. Gene is expressed in the elongation and differention zone in trichoblasts and elongating root hairs. RDH2 is localized to the growing tips of root hair cells. It is required for the production of reactive oxygen species in response to extracellular ATP stimulus. The increase in ROS production stimulates Ca2+ influx. ROOT HAIR DEFECTIVE 2 (RHD2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G25090.1); Has 2388 Blast hits to 2271 proteins in 341 species: Archae - 10; Bacteria - 214; Metazoa - 694; Fungi - 757; Plants - 530; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink).
23
at5g60890
myb domain protein 34 Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis. myb domain protein 34 (MYB34); FUNCTIONS IN: DNA binding, transcription activator activity, kinase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: tryptophan biosynthetic process, response to jasmonic acid stimulus, defense response to insect, cellular response to sulfur starvation, indole glucosinolate biosynthetic process; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 122 (TAIR:AT1G74080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit