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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 28 " Y:" 1 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adp032043 LinkIcon Positive ATH06p11457 LinkIcon PT111740 LinkIcon 0.977
Quercetin-3-O-alpha-L-rhamnopyranosyl(1->2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside; MS2; Q-Tof; [M+H]+
   Quercetin-3-O-alpha-L-rhamnopyranosyl(1-2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside
  Quer-3-(Rha-Glu)-7-Rha
  Quercetin-3-neohesperidoside-7-rhamnoside
PM018157 LinkIcon 0.973
Quercetin-3-arabinoside-7-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-3-arabinoside-7-rhamnoside
PM018160 LinkIcon 0.972
Quercetin-3-O-b-glucosyl-7-O-a-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-3-O-b-glucosyl-7-O-a-rhamnoside
ATH63p16202 LinkIcon PT111750 LinkIcon 0.970
Quercetin-3-O-b-glucopyranosyl-7-O-a-rhamnopyranoside; MS2; Q-Tof; [M+H]+
   Quercetin-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside
  Quer-3-Glc-7-Rha
  SPECIES
  quercetin-3-glucoside-7-rhamnoside
PM018157 LinkIcon 0.969
Quercetin-3-arabinoside-7-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-3-arabinoside-7-rhamnoside
PM018160 LinkIcon 0.966
Quercetin-3-O-b-glucosyl-7-O-a-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-3-O-b-glucosyl-7-O-a-rhamnoside
ATH13p13882 LinkIcon PS118203 LinkIcon 0.965
Sinapine; MS2; QqQ; positive; CE 30 V
   Sinapine
  o-Sinapoylcholine
  Sinapine bisulphate
  4-Hydroxy-3,5-dimethoxycinnamate choline
ATH63p16202 LinkIcon PT111740 LinkIcon 0.965
Quercetin-3-O-alpha-L-rhamnopyranosyl(1->2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside; MS2; Q-Tof; [M+H]+
   Quercetin-3-O-alpha-L-rhamnopyranosyl(1-2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside
  Quer-3-(Rha-Glu)-7-Rha
  Quercetin-3-neohesperidoside-7-rhamnoside
PM008001 LinkIcon 0.963
Quercetin 3-O-alpha-rhamnopyranoside; MS2; QIT; M+H; 15->55V
   Quercetin 3-O-alpha-rhamnopyranoside
ATH13p13882 LinkIcon PS118202 LinkIcon 0.954
Sinapine; MS2; QqQ; positive; CE 20 V
   Sinapine
  o-Sinapoylcholine
  Sinapine bisulphate
  4-Hydroxy-3,5-dimethoxycinnamate choline
ATH63p16202 LinkIcon PM018166 LinkIcon 0.952
Quercetin-dihexoside-rhamnoside-isomer; MS2; Q-TOF; M+H; 15->55V
   Quercetin-dihexoside-rhamnoside-isomer
ATH06p11457 LinkIcon PT111690 LinkIcon 0.951
Quercetin-3,7-O-alpha-L-dirhamnopyranoside; MS2; Q-Tof; [M+H]+
   Quercetin-3,7-O-alpha-L-dirhamnopyranoside
  Quer-3-Rha-7-Rha
  Quercetin-3-rhamnoside-7-rhamnoside
  Quercetin-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside
  Quer-3-Glc-7-Rha
  SPECIES
  quercetin-3-glucoside-7-rhamnoside
ATH63p16202 LinkIcon PM018145 LinkIcon 0.951
Kaempferol-3-glucoside; MS2; Q-TOF; M+H; 15->55V
   Kaempferol-3-glucoside
PT111700 LinkIcon 0.949
Quercetin-7-O-rhamnoside; MS2; Q-Tof; [M+H]+
   Quercetin-7-O-rhamnoside
  Quer-7-Rha
  Vincetoxicoside B
  2-(3,4-dihydroxyphenyl)-3,5-dihydroxy-7-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxychromen-4-one
PT111690 LinkIcon 0.947
Quercetin-3,7-O-alpha-L-dirhamnopyranoside; MS2; Q-Tof; [M+H]+
   Quercetin-3,7-O-alpha-L-dirhamnopyranoside
  Quer-3-Rha-7-Rha
  Quercetin-3-rhamnoside-7-rhamnoside
ATH06p11457 LinkIcon PS043501 LinkIcon 0.944
Quercitrin; MS2; QqQ; positive; CE 10 V
   Quercitrin
  Quer-3-Rha
  Quercitrin
  thujin
  Quercetrin
  Quercimelin
  Quercitroside
  quercetin-3-O-rhamnoside
  Quercetin- 3-(6-deoxy-alpha-L-mannopyranoside)
  3,3',4',5,7-Pentahydroxyflavone-3-L-rhamnoside
ATH63p16202 LinkIcon PS117503 LinkIcon 0.943
Quercetin-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside; MS2; QqQ; positive; CE 30 V
   Quercetin-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside
  Quer-3-Glc-7-Rha
  SPECIES
  quercetin-3-glucoside-7-rhamnoside
ATH13p13882 LinkIcon PM018093 LinkIcon 0.935
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH09p10987 LinkIcon PT112530 LinkIcon 0.933
Calciferol; MS2; Q-Tof; [M+H]+
   Calciferol
  Vitamin D2
  Ergocalciferol
  Viosterin
  Osteil
  Viosterol
  Ercalciol
  Irradiated ergosterol
  Condacaps
  Condocaps
  Condol
  Crtron
  Crystallina
  Daral
  (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol
  Davitin
  Deltalin
  Deratol
  Diactol
  Drisdol
  Ergorone
  Ertron
  Fortodyl
  Geltabs
  Hyperkil
  Irradiated ergosta-5,7,22-trien-3-beta-ol
  Metadee
ATH06p11457 LinkIcon PM008001 LinkIcon 0.932
Quercetin 3-O-alpha-rhamnopyranoside; MS2; QIT; M+H; 15->55V
   Quercetin 3-O-alpha-rhamnopyranoside
PM018166 LinkIcon 0.928
Quercetin-dihexoside-rhamnoside-isomer; MS2; Q-TOF; M+H; 15->55V
   Quercetin-dihexoside-rhamnoside-isomer
PS116801 LinkIcon 0.927
Quercetin-3-O-alpha-L-rhamnopyranoside; MS2; QqQ; positive; CE 10 V
   Quercetin-3-O-alpha-L-rhamnopyranoside
  Quer-3-Rha
  Quercitrin
  thujin
  Quercetrin
  Quercimelin
  Quercitroside
  quercetin-3-O-rhamnoside
  Quercetin- 3-(6-deoxy-alpha-L-mannopyranoside)
  3,3',4',5,7-Pentahydroxyflavone-3-L-rhamnoside
ATH13p13882 LinkIcon PM008050 LinkIcon 0.927
4-Hexosyloxy-3,5-dimethoxy-cinnamoylcholine; MS2; QIT; M+Na; 15->55V
   4-Hexosyloxy-3,5-dimethoxy-cinnamoylcholine
PM018094 LinkIcon 0.923
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
PM018112 LinkIcon 0.917
Sinapoylcholine 4-O-hexoside; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine 4-O-hexoside
  4-Hexosyloxy-3,5-dimethoxy-cinnamoylcholine
ATH06p11457 LinkIcon PM001808 LinkIcon 0.916
Herbacetin-7-O-rha-8-O-glu; MS2; QqQ; M+H; 15
   Herbacetin-7-O-rha-8-O-glu
ATH09p10987 LinkIcon PT112580 LinkIcon 0.905
delta-Tocotrienol; MS2; Q-Tof; [M+H]+
   delta-Tocotrienol
  8-Methyltocotrienol
  (R)-delta-Tocotrienol
  (2R)-2,8-dimethyl-2-[(3E,7E)-4,8,12-trimethyltrideca-3,7,11-trienyl]chroman-6-ol
ATH14p12101 LinkIcon - -
-
ATH14p12297 LinkIcon - -
-
ATH64p15298 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g02360
Chitinase family protein - Chitinase family protein; FUNCTIONS IN: chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, cotyledon, leaf whorl, root; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2043 Blast hits to 2034 proteins in 421 species: Archae - 0; Bacteria - 465; Metazoa - 37; Fungi - 5; Plants - 1453; Viruses - 2; Other Eukaryotes - 81 (source: NCBI BLink).
2
at1g47480
alpha/beta-Hydrolases superfamily protein - alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 8596 Blast hits to 8578 proteins in 1414 species: Archae - 104; Bacteria - 4918; Metazoa - 486; Fungi - 808; Plants - 1365; Viruses - 3; Other Eukaryotes - 912 (source: NCBI BLink).
3
at1g61590
Protein kinase superfamily protein - Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G05940.1); Has 114879 Blast hits to 113543 proteins in 3746 species: Archae - 105; Bacteria - 13385; Metazoa - 42146; Fungi - 9605; Plants - 32529; Viruses - 373; Other Eukaryotes - 16736 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit