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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Keyword
AGI locus IDs

Choosing cell X:" 28 " Y:" 22 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn038042 LinkIcon Negative ATH56n09123 LinkIcon PM018030 LinkIcon 0.913
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH62n08758 LinkIcon PM018030 LinkIcon 0.912
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH63n09476 LinkIcon PM018030 LinkIcon 0.911
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH63n08458 LinkIcon PM018030 LinkIcon 0.901
Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V
   Putative glucosinolate
ATH06n05688 LinkIcon - -
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ATH07n05744 LinkIcon - -
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ATH07n05964 LinkIcon - -
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ATH08n08220 LinkIcon - -
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ATH08n08848 LinkIcon - -
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ATH08n09025 LinkIcon - -
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ATH09n08018 LinkIcon - -
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ATH09n08473 LinkIcon - -
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ATH09n08676 LinkIcon - -
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ATH10n05701 LinkIcon - -
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ATH10n05906 LinkIcon - -
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ATH11n05072 LinkIcon - -
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ATH12n04344 LinkIcon - -
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ATH12n04347 LinkIcon - -
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ATH12n04683 LinkIcon - -
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ATH13n07109 LinkIcon - -
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ATH13n07794 LinkIcon - -
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ATH14n07362 LinkIcon - -
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ATH14n07365 LinkIcon - -
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ATH14n07777 LinkIcon - -
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ATH56n10137 LinkIcon - -
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ATH57n09344 LinkIcon - -
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ATH57n09823 LinkIcon - -
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ATH57n10287 LinkIcon - -
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ATH58n10524 LinkIcon - -
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ATH59n09284 LinkIcon - -
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ATH59n09776 LinkIcon - -
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ATH59n10252 LinkIcon - -
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ATH60n09647 LinkIcon - -
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ATH60n09886 LinkIcon - -
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ATH61n08185 LinkIcon - -
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ATH61n09121 LinkIcon - -
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ATH61n09126 LinkIcon - -
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ATH62n09652 LinkIcon - -
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ATH63n09715 LinkIcon - -
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ATH64n09621 LinkIcon - -
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2 adp019852 LinkIcon Positive ATH58p10604 LinkIcon PS050902 LinkIcon 0.904
4-methylsulfinylbutyl glucosinolate; MS2; QqQ; positive; CE 20 V
   4-methylsulfinylbutyl glucosinolate
  4MSOB
  glucoraphanin
  4-(Methylsulfinyl)butylglucosinolate
ATH06p08335 LinkIcon - -
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ATH09p08091 LinkIcon - -
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ATH11p08244 LinkIcon - -
-
ATH12p08050 LinkIcon - -
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ATH58p10798 LinkIcon - -
-
ATH59p08770 LinkIcon - -
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3 adp027159 LinkIcon Positive ATH07p09632 LinkIcon PT112530 LinkIcon 0.953
Calciferol; MS2; Q-Tof; [M+H]+
   Calciferol
  Vitamin D2
  Ergocalciferol
  Viosterin
  Osteil
  Viosterol
  Ercalciol
  Irradiated ergosterol
  Condacaps
  Condocaps
  Condol
  Crtron
  Crystallina
  Daral
  (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol
  Davitin
  Deltalin
  Deratol
  Diactol
  Drisdol
  Ergorone
  Ertron
  Fortodyl
  Geltabs
  Hyperkil
  Irradiated ergosta-5,7,22-trien-3-beta-ol
  Metadee
PT112580 LinkIcon 0.946
delta-Tocotrienol; MS2; Q-Tof; [M+H]+
   delta-Tocotrienol
  8-Methyltocotrienol
  (R)-delta-Tocotrienol
  (2R)-2,8-dimethyl-2-[(3E,7E)-4,8,12-trimethyltrideca-3,7,11-trienyl]chroman-6-ol
ATH06p10122 LinkIcon - -
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ATH06p10376 LinkIcon - -
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ATH07p09519 LinkIcon - -
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ATH07p09635 LinkIcon - -
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ATH07p09884 LinkIcon - -
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ATH08p10947 LinkIcon - -
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ATH09p09835 LinkIcon - -
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ATH09p10085 LinkIcon - -
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ATH10p09259 LinkIcon - -
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ATH11p10132 LinkIcon - -
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ATH11p10592 LinkIcon - -
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ATH12p09302 LinkIcon - -
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ATH56p11568 LinkIcon - -
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ATH56p11570 LinkIcon - -
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ATH56p12606 LinkIcon - -
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ATH57p11139 LinkIcon - -
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ATH57p11628 LinkIcon - -
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ATH58p13092 LinkIcon - -
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ATH58p13442 LinkIcon - -
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ATH59p11025 LinkIcon - -
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ATH59p11354 LinkIcon - -
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ATH59p11613 LinkIcon - -
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ATH61p13130 LinkIcon - -
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ATH61p13875 LinkIcon - -
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ATH61p13878 LinkIcon - -
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ATH62p10965 LinkIcon - -
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ATH62p11718 LinkIcon - -
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ATH63p11920 LinkIcon - -
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ATH63p12650 LinkIcon - -
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ATH63p12872 LinkIcon - -
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ATH63p14437 LinkIcon - -
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2. Gene information

No. ID Short description Curator summary Computational description
1
at1g68540
NAD(P)-binding Rossmann-fold superfamily protein - NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, oxidoreductase activity, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G25460.1); Has 11845 Blast hits to 11829 proteins in 1981 species: Archae - 255; Bacteria - 5165; Metazoa - 379; Fungi - 967; Plants - 2499; Viruses - 61; Other Eukaryotes - 2519 (source: NCBI BLink).
2
at2g45650
AGAMOUS-like 6 sequence suggests this encodes a MADS-box transcription factor AGAMOUS-like 6 (AGL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, floral organ development; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 13 (TAIR:AT3G61120.1); Has 7294 Blast hits to 7293 proteins in 914 species: Archae - 0; Bacteria - 0; Metazoa - 630; Fungi - 307; Plants - 6281; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
3
at4g28580
magnesium transport 5 Transmembrane magnesium transporter. One of nine family members. Functions in pollen development. magnesium transport 5 (MGT5); BEST Arabidopsis thaliana protein match is: magnesium transporter 6 (TAIR:AT3G58970.1); Has 828 Blast hits to 824 proteins in 200 species: Archae - 0; Bacteria - 80; Metazoa - 59; Fungi - 196; Plants - 383; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit