Home Gene search Metabolite search PRIMe
 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
 Highlight filters
Keyword
AGI locus IDs

Choosing cell X:" 29 " Y:" 2 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn003453 LinkIcon Negative ATH14n00044 LinkIcon - -
-
ATH14n00347 LinkIcon - -
-
ATH14n00561 LinkIcon - -
-
ATH14n00564 LinkIcon - -
-
ATH59n01239 LinkIcon - -
-
ATH64n00054 LinkIcon - -
-
ATH64n00949 LinkIcon - -
-
2 adn026781 LinkIcon Negative ATH08n05181 LinkIcon - -
-
ATH08n05817 LinkIcon - -
-
ATH09n04974 LinkIcon - -
-
ATH13n04554 LinkIcon - -
-
ATH14n04112 LinkIcon - -
-
ATH14n04874 LinkIcon - -
-
ATH56n05605 LinkIcon - -
-
ATH56n06602 LinkIcon - -
-
ATH59n05545 LinkIcon - -
-
ATH59n06543 LinkIcon - -
-
ATH60n05512 LinkIcon - -
-
ATH60n06008 LinkIcon - -
-
ATH61n05238 LinkIcon - -
-
ATH61n05888 LinkIcon - -
-
ATH64n05349 LinkIcon - -
-
ATH64n05804 LinkIcon - -
-
3 adn035585 LinkIcon Negative ATH06n04310 LinkIcon - -
-
ATH06n04822 LinkIcon - -
-
ATH06n04825 LinkIcon - -
-
ATH07n04715 LinkIcon - -
-
ATH07n05804 LinkIcon - -
-
ATH08n07561 LinkIcon - -
-
ATH08n08034 LinkIcon - -
-
ATH11n04043 LinkIcon - -
-
ATH12n04030 LinkIcon - -
-
ATH14n06338 LinkIcon - -
-
ATH14n06341 LinkIcon - -
-
ATH14n06967 LinkIcon - -
-
ATH14n06970 LinkIcon - -
-
ATH56n08419 LinkIcon - -
-
ATH56n08423 LinkIcon - -
-
ATH56n09185 LinkIcon - -
-
ATH57n08669 LinkIcon - -
-
ATH58n08542 LinkIcon - -
-
ATH58n09571 LinkIcon - -
-
ATH59n08601 LinkIcon - -
-
ATH62n07845 LinkIcon - -
-
ATH62n08577 LinkIcon - -
-
ATH64n07961 LinkIcon - -
-
ATH64n08214 LinkIcon - -
-
ATH64n08694 LinkIcon - -
-
ATH64n08697 LinkIcon - -
-
4 adp000885 LinkIcon Positive ATH14p00052 LinkIcon PS037202 LinkIcon 0.937
Uridine-5'-monophosphate; MS2; QqQ; positive; CE 20 V
   Uridine-5'-monophosphate
  UMP
  U 5′-P
  Uridylic acid
  uridylate
PS036704 LinkIcon 0.933
Uridine-5'-diphosphogalactose disodium salt ; MS2; QqQ; positive; CE 40 V
   Uridine-5'-diphosphogalactose disodium salt
  UDP-Gal
  UDP-Galactose disodium salt
  Uridine-5'-diphosphogalactose
  UDP-D-galactopyranose 
PS022303 LinkIcon 0.932
D-Ribose-5-phosphate disodium salt hydrate; MS2; QqQ; positive; CE 30 V
   D-Ribose-5-phosphate disodium salt hydrate
  Rib-5P
  R-5-P
  D-Ribofuranose 5-phosphate disodium salt
PS037405 LinkIcon 0.917
Xanthosine-5′-monophosphate disodium salt ; MS2; QqQ; positive; CE 50 V
   Xanthosine-5′-monophosphate disodium salt
  XMP
  Xanthylic acid
  (9-D-Ribosylxanthine)-5'-phosphate
PS037404 LinkIcon 0.912
Xanthosine-5′-monophosphate disodium salt ; MS2; QqQ; positive; CE 40 V
   Xanthosine-5′-monophosphate disodium salt
  XMP
  Xanthylic acid
  (9-D-Ribosylxanthine)-5'-phosphate
PS037206 LinkIcon 0.907
Uridine-5'-monophosphate; MS2; QqQ; positive; CE 60 V
   Uridine-5'-monophosphate
  UMP
  U 5′-P
  Uridylic acid
  uridylate
ATH64p00326 LinkIcon - -
-
5 adp001873 LinkIcon Positive ATH14p00327 LinkIcon - -
-
ATH14p01346 LinkIcon - -
-
ATH64p00589 LinkIcon - -
-
ATH64p00840 LinkIcon - -
-
6 adp010929 LinkIcon Positive ATH06p05765 LinkIcon - -
-
ATH08p05608 LinkIcon - -
-
ATH08p06158 LinkIcon - -
-
ATH11p05231 LinkIcon - -
-
ATH11p05815 LinkIcon - -
-
ATH14p06447 LinkIcon - -
-
ATH56p05458 LinkIcon - -
-
ATH56p05724 LinkIcon - -
-
ATH58p05812 LinkIcon - -
-
ATH58p06560 LinkIcon - -
-
ATH61p07226 LinkIcon - -
-
ATH61p07664 LinkIcon - -
-
ATH64p07094 LinkIcon - -
-
7 adp011007 LinkIcon Positive ATH64p06350 LinkIcon PS007601 LinkIcon 0.919
Nicotinic Acid; MS2; QqQ; positive; CE 10 V
   Nicotinic Acid
  Vitamin B3
  Niacin
  Nicotinate
  3-Picolinic acid
  Pyridine-3-carbonic acid
  Pellagra preventive factor
PM018199 LinkIcon 0.913
Nicotinic acid; MS2; Q-TOF; M+H; 15->55V
   Nicotinic acid
PM000942 LinkIcon 0.903
N3-methyl-L-histidine; MS2; QqQ; M+H; 20
   N3-methyl-L-histidine
ATH14p05904 LinkIcon - -
-
ATH64p07118 LinkIcon - -
-
8 adp012780 LinkIcon Positive ATH64p07402 LinkIcon PS024305 LinkIcon 0.974
Guanosine-5'-diphosphate-D-mannose sodium salt; MS2; QqQ; positive; CE 50 V
   Guanosine-5'-diphosphate-D-mannose sodium salt
  GDP-mannose
  GDP-Man
  Guanosine 5'-Diphospho-D-mannose Sodium Salt
PS012403 LinkIcon 0.972
Guanosine-5'-diphosphate sodium salt; MS2; QqQ; positive; CE 30 V
   Guanosine-5'-diphosphate sodium salt
  GDP
  Acetaminophen
  APAP
  NAPA
  Acetaminofen
  4'-Hydroxyacetanilide
  4-Acetamidophenol
  N-Acetyl-4-aminophenol
  p-Hydroxyacetanilide
  Tylenol
  Valgesic
  Paracetamol
  Panadol
  Paraacetamol
  Abensanil
  Acamol
  Acetalgin
  Algotropyl
  Alvedon
  Amadil
  Anaflon
  Anelix
  Calpol
  Cetadol
  Clixodyne
  Datril
  Naprinol
  Napafen
  Panets
  Pyrin
PS024103 LinkIcon 0.971
Guanosine; MS2; QqQ; positive; CE 30 V
   Guanosine
  GR
  Guanidine
  Guanine Riboside
  Vernine
  9-(beta-D-Ribofuranosyl)guanine
  Guanine-9-beta-D-ribofuranoside
PT101700 LinkIcon 0.970
Amantadine hydrochloride; MS2; Q-Tof; [M+H]+
   Amantadine hydrochloride
  1-Adamantanamine hydrochloride
  1-Adamantylamine hydrochloride
  1-Aminoadamantane hydrochloride
  Tricyclodecane Hydrochloride
  Amazolon
  Mantadine
  Mantadix
  Midantan
  Symadine
  Symmetrel
  Virofral
  Virasol
  adamantan-1-amine
PS014602 LinkIcon 0.969
2'-Deoxyguanosine monohydrate ; MS2; QqQ; positive; CE 20 V
   2'-Deoxyguanosine monohydrate
  dG
  2'-Deoxy-G
  Guanine-2'-deoxyriboside
  9-(2-Deoxy-beta-D-ribofuranosyl)guanine
  (-)-Norepinephrine
  (-)-Noradrenaline
  (R)-4-(2-Amino-1-hydroxyethyl)-1,2-benzenediol
  L-Arterenol
  Levarterenol
  Levophed
  Adrenor
  Guanosine-5'-diphosphoglucose sodium salt
  GDPG
  GDP-glucose
  GDP-Glc
PS048002 LinkIcon 0.968
2'-deoxyguanosine 5'-monophosphate sodium salt hydrate; MS2; QqQ; positive; CE 20 V
   2'-deoxyguanosine 5'-monophosphate sodium salt hydrate
  dGMP
  Deoxy-GMP
  5'-Deoxyguanylic acid
  vernine
  Guanosine
  GR
  Guanidine
  Guanine Riboside
  Vernine
  9-(beta-D-Ribofuranosyl)guanine
  Guanine-9-beta-D-ribofuranoside
ATH14p06707 LinkIcon PS024306 LinkIcon 0.949
Guanosine-5'-diphosphate-D-mannose sodium salt; MS2; QqQ; positive; CE 60 V
   Guanosine-5'-diphosphate-D-mannose sodium salt
  GDP-mannose
  GDP-Man
  Guanosine 5'-Diphospho-D-mannose Sodium Salt
PS024205 LinkIcon 0.935
Guanosine-3',5'-cyclic monophosphate; MS2; QqQ; positive; CE 50 V
   Guanosine-3',5'-cyclic monophosphate
  cGMP
  cyclic GMP
PS024104 LinkIcon 0.933
Guanosine; MS2; QqQ; positive; CE 40 V
   Guanosine
  GR
  Guanidine
  Guanine Riboside
  Vernine
  9-(beta-D-Ribofuranosyl)guanine
  Guanine-9-beta-D-ribofuranoside
PS024203 LinkIcon 0.928
Guanosine-3',5'-cyclic monophosphate; MS2; QqQ; positive; CE 30 V
   Guanosine-3',5'-cyclic monophosphate
  cGMP
  cyclic GMP
  Guanosine-5'-monophosphate
  GMP
  G-5'-P
  5'-GMP
  Guanosine monophosphate
  Guanylic acid
PS024603 LinkIcon 0.926
Guanosine-5'-monophosphate disodium salt hydrate from Yeast; MS2; QqQ; positive; CE 30 V
   Guanosine-5'-monophosphate disodium salt hydrate from Yeast
  GMP
  G-5'-P
  5'-GMP
  Guanosine monophosphate
  Guanylic acid
PS014603 LinkIcon 0.924
2'-Deoxyguanosine monohydrate ; MS2; QqQ; positive; CE 30 V
   2'-Deoxyguanosine monohydrate
  dG
  2'-Deoxy-G
  Guanine-2'-deoxyriboside
  9-(2-Deoxy-beta-D-ribofuranosyl)guanine
  Guanosine-5'-monophosphate disodium salt hydrate from Yeast
  GMP
  G-5'-P
  5'-GMP
  Guanosine monophosphate
  Guanylic acid
PS024505 LinkIcon 0.921
Guanosine-5'-diphospho-beta-L-fucose; MS2; QqQ; positive; CE 50 V
   Guanosine-5'-diphospho-beta-L-fucose
  GDP-Fuc
  GDP-fucose
  6-Deoxy-beta-L-galactopyranosylguanosine 5'-diphosphate
  2'-Deoxyguanosine monohydrate
  dG
  2'-Deoxy-G
  Guanine-2'-deoxyriboside
  9-(2-Deoxy-beta-D-ribofuranosyl)guanine
ATH06p06112 LinkIcon - -
-
ATH09p06508 LinkIcon - -
-
ATH10p06019 LinkIcon - -
-
ATH13p07029 LinkIcon - -
-
ATH13p07430 LinkIcon - -
-
ATH56p06247 LinkIcon - -
-
ATH57p05475 LinkIcon - -
-
ATH58p07130 LinkIcon - -
-
ATH59p06332 LinkIcon - -
-
ATH61p07413 LinkIcon - -
-
ATH61p07941 LinkIcon - -
-
ATH62p05711 LinkIcon - -
-
ATH63p07502 LinkIcon - -
-
9 adp016756 LinkIcon Positive ATH64p09652 LinkIcon PT101700 LinkIcon 0.952
Amantadine hydrochloride; MS2; Q-Tof; [M+H]+
   Amantadine hydrochloride
  1-Adamantanamine hydrochloride
  1-Adamantylamine hydrochloride
  1-Aminoadamantane hydrochloride
  Tricyclodecane Hydrochloride
  Amazolon
  Mantadine
  Mantadix
  Midantan
  Symadine
  Symmetrel
  Virofral
  Virasol
  adamantan-1-amine
PS102301 LinkIcon 0.948
Acetaminophen; MS2; QqQ; positive; CE 10 V
   Acetaminophen
  APAP
  NAPA
  Acetaminofen
  4'-Hydroxyacetanilide
  4-Acetamidophenol
  N-Acetyl-4-aminophenol
  p-Hydroxyacetanilide
  Tylenol
  Valgesic
  Paracetamol
  Panadol
  Paraacetamol
  Abensanil
  Acamol
  Acetalgin
  Algotropyl
  Alvedon
  Amadil
  Anaflon
  Anelix
  Calpol
  Cetadol
  Clixodyne
  Datril
  Naprinol
  Napafen
  Panets
  Pyrinazine
  Tabalgin
  Tralgon
  Tussapap
  Apamide
  D
PS024103 LinkIcon 0.947
Guanosine; MS2; QqQ; positive; CE 30 V
   Guanosine
  GR
  Guanidine
  Guanine Riboside
  Vernine
  9-(beta-D-Ribofuranosyl)guanine
  Guanine-9-beta-D-ribofuranoside
PS001401 LinkIcon 0.945
(-)-Norepinephrine; MS2; QqQ; positive; CE 10 V
   (-)-Norepinephrine
  (-)-Noradrenaline
  (R)-4-(2-Amino-1-hydroxyethyl)-1,2-benzenediol
  L-Arterenol
  Levarterenol
  Levophed
  Adrenor
PS014602 LinkIcon 0.944
2'-Deoxyguanosine monohydrate ; MS2; QqQ; positive; CE 20 V
   2'-Deoxyguanosine monohydrate
  dG
  2'-Deoxy-G
  Guanine-2'-deoxyriboside
  9-(2-Deoxy-beta-D-ribofuranosyl)guanine
PS024305 LinkIcon 0.943
Guanosine-5'-diphosphate-D-mannose sodium salt; MS2; QqQ; positive; CE 50 V
   Guanosine-5'-diphosphate-D-mannose sodium salt
  GDP-mannose
  GDP-Man
  Guanosine 5'-Diphospho-D-mannose Sodium Salt
  Guanosine
  GR
  Guanidine
  Guanine Riboside
  Vernine
  9-(beta-D-Ribofuranosyl)guanine
  Guanine-9-beta-D-ribofuranoside
  2'-Deoxyguanosine-5'-diphosphate sodium salt
  dGDP
  deoxy-GDP
  DGI
  Guanosine-5'-monophosphate
  GMP
  G-5'-P
  5'-GMP
  Guanosin
ATH08p08170 LinkIcon - -
-
ATH12p07314 LinkIcon - -
-
ATH12p07444 LinkIcon - -
-
ATH14p08455 LinkIcon - -
-
ATH14p08827 LinkIcon - -
-
ATH59p07366 LinkIcon - -
-
ATH62p06900 LinkIcon - -
-
ATH63p08463 LinkIcon - -
-
10 adp029917 LinkIcon Positive ATH12p10009 LinkIcon - -
-
ATH64p14762 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at2g42850
cytochrome P450, family 718 member of CYP718 "cytochrome P450, family 718" (CYP718); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 1 (TAIR:AT5G36110.1); Has 34767 Blast hits to 34691 proteins in 1811 species: Archae - 71; Bacteria - 7179; Metazoa - 11081; Fungi - 6228; Plants - 8366; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink).
2
at3g20110
cytochrome P450, family 705, subfamily A, polypeptide 20 member of CYP705A "cytochrome P450, family 705, subfamily A, polypeptide 20" (CYP705A20); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 19 (TAIR:AT3G20100.1); Has 35155 Blast hits to 34985 proteins in 1775 species: Archae - 57; Bacteria - 5353; Metazoa - 11481; Fungi - 7177; Plants - 9434; Viruses - 6; Other Eukaryotes - 1647 (source: NCBI BLink).
3
at3g44990
xyloglucan endo-transglycosylase-related 8 xyloglucan endo-transglycosylase xyloglucan endo-transglycosylase-related 8 (XTR8); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: cell wall biogenesis; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 32 (TAIR:AT2G36870.1); Has 1950 Blast hits to 1931 proteins in 270 species: Archae - 2; Bacteria - 210; Metazoa - 0; Fungi - 320; Plants - 1353; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
4
at4g28850
xyloglucan endotransglucosylase/hydrolase 26 - xyloglucan endotransglucosylase/hydrolase 26 (XTH26); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 2230 Blast hits to 2210 proteins in 325 species: Archae - 0; Bacteria - 312; Metazoa - 0; Fungi - 457; Plants - 1370; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).
5
at4g29800
PATATIN-like protein 8 - PATATIN-like protein 8 (PLP8); INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1); Has 1056 Blast hits to 1054 proteins in 201 species: Archae - 0; Bacteria - 296; Metazoa - 30; Fungi - 46; Plants - 580; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink).
6
at5g24140
squalene monooxygenase 2 Encodes a protein with similarity to squalene monoxygenases. squalene monooxygenase 2 (SQP2); FUNCTIONS IN: squalene monooxygenase activity, oxidoreductase activity, FAD binding; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698), FAD dependent oxidoreductase (InterPro:IPR006076); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G24150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
7
at5g53980
homeobox protein 52 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 52 (HB52); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to blue light, regulation of transcription, DNA-dependent, response to absence of light; LOCATED IN: nucleus; EXPRESSED IN: root, flower; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox 3 (TAIR:AT5G15150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
8
at5g57540
xyloglucan endotransglucosylase/hydrolase 13 Encodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC 2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity. xyloglucan endotransglucosylase/hydrolase 13 (XTH13); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan endotransglucosylase activity; INVOLVED IN: xyloglucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 12 (TAIR:AT5G57530.1); Has 2225 Blast hits to 2203 proteins in 306 species: Archae - 0; Bacteria - 288; Metazoa - 0; Fungi - 452; Plants - 1385; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit