Home Gene search Metabolite search PRIMe
 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
 Highlight filters
Keyword
AGI locus IDs

Choosing cell X:" 2 " Y:" 0 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn036971 LinkIcon Negative ATH61n08466 LinkIcon PM018017 LinkIcon 0.912
4-Benzoyloxy-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Benzoyloxy-n-butyl glucosinolate
ATH64n08916 LinkIcon PM018017 LinkIcon 0.902
4-Benzoyloxy-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Benzoyloxy-n-butyl glucosinolate
ATH10n06374 LinkIcon - -
-
ATH11n04546 LinkIcon - -
-
ATH11n04549 LinkIcon - -
-
ATH11n05098 LinkIcon - -
-
ATH13n07384 LinkIcon - -
-
ATH13n08066 LinkIcon - -
-
ATH13n08271 LinkIcon - -
-
ATH14n07387 LinkIcon - -
-
ATH14n07974 LinkIcon - -
-
ATH59n09546 LinkIcon - -
-
ATH61n09147 LinkIcon - -
-
ATH63n08735 LinkIcon - -
-
ATH63n08739 LinkIcon - -
-
ATH63n09246 LinkIcon - -
-
2 adn039309 LinkIcon Negative ATH06n06241 LinkIcon - -
-
ATH07n05972 LinkIcon - -
-
ATH07n06656 LinkIcon - -
-
ATH09n08937 LinkIcon - -
-
ATH09n09301 LinkIcon - -
-
ATH10n05918 LinkIcon - -
-
ATH10n06361 LinkIcon - -
-
ATH10n06538 LinkIcon - -
-
ATH11n05084 LinkIcon - -
-
ATH12n04690 LinkIcon - -
-
ATH13n07804 LinkIcon - -
-
ATH13n08437 LinkIcon - -
-
ATH14n07787 LinkIcon - -
-
ATH14n08523 LinkIcon - -
-
ATH57n09834 LinkIcon - -
-
ATH57n10299 LinkIcon - -
-
ATH57n10790 LinkIcon - -
-
ATH59n09787 LinkIcon - -
-
ATH59n10516 LinkIcon - -
-
ATH60n09901 LinkIcon - -
-
ATH60n10361 LinkIcon - -
-
ATH63n09230 LinkIcon - -
-
ATH63n09972 LinkIcon - -
-
ATH64n09849 LinkIcon - -
-
ATH64n10277 LinkIcon - -
-
3 adn045149 LinkIcon Negative ATH06n07327 LinkIcon - -
-
ATH08n10891 LinkIcon - -
-
ATH11n06069 LinkIcon - -
-
ATH13n09079 LinkIcon - -
-
ATH13n09082 LinkIcon - -
-
ATH13n09740 LinkIcon - -
-
ATH13n09980 LinkIcon - -
-
ATH56n11922 LinkIcon - -
-
ATH56n12407 LinkIcon - -
-
ATH58n12860 LinkIcon - -
-
ATH61n11505 LinkIcon - -
-
ATH63n10750 LinkIcon - -
-
ATH63n11013 LinkIcon - -
-
ATH63n11525 LinkIcon - -
-
ATH63n11528 LinkIcon - -
-
4 adn047077 LinkIcon Negative ATH13n09914 LinkIcon - -
-
ATH13n10127 LinkIcon - -
-
ATH13n10331 LinkIcon - -
-
ATH63n11461 LinkIcon - -
-
ATH63n12221 LinkIcon - -
-
5 adp007734 LinkIcon Positive ATH13p05421 LinkIcon PM018111 LinkIcon 1.000
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH11p04747 LinkIcon PM018094 LinkIcon 0.998
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH13p04694 LinkIcon PM018111 LinkIcon 0.998
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH11p04747 LinkIcon PM018093 LinkIcon 0.992
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH11p04205 LinkIcon PM018111 LinkIcon 0.986
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH11p04208 LinkIcon PM018094 LinkIcon 0.984
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH61p05761 LinkIcon PM018111 LinkIcon 0.977
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH11p04747 LinkIcon PM018092 LinkIcon 0.974
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH11p04208 LinkIcon PM018093 LinkIcon 0.973
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
PM018092 LinkIcon 0.964
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
PM018111 LinkIcon 0.961
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH61p06279 LinkIcon PM018094 LinkIcon 0.951
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
PM018092 LinkIcon 0.950
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
PM018111 LinkIcon 0.947
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH63p05649 LinkIcon PM018111 LinkIcon 0.947
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH11p04744 LinkIcon PM018094 LinkIcon 0.942
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH63p04857 LinkIcon PM018111 LinkIcon 0.942
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH11p04744 LinkIcon PM018093 LinkIcon 0.940
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH61p06279 LinkIcon PM018093 LinkIcon 0.939
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH11p04744 LinkIcon PM018092 LinkIcon 0.926
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH11p04747 LinkIcon PM018111 LinkIcon 0.925
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH61p05761 LinkIcon PM018094 LinkIcon 0.925
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
PM018092 LinkIcon 0.923
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH11p04747 LinkIcon PS118202 LinkIcon 0.920
Sinapine; MS2; QqQ; positive; CE 20 V
   Sinapine
  o-Sinapoylcholine
  Sinapine bisulphate
  4-Hydroxy-3,5-dimethoxycinnamate choline
ATH61p05758 LinkIcon PM018111 LinkIcon 0.911
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH61p05761 LinkIcon PM018093 LinkIcon 0.910
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH13p05421 LinkIcon PM018094 LinkIcon 0.902
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH07p04351 LinkIcon - -
-
ATH07p04843 LinkIcon - -
-
ATH10p04063 LinkIcon - -
-
ATH12p04881 LinkIcon - -
-
ATH56p04608 LinkIcon - -
-
ATH58p05431 LinkIcon - -
-
ATH61p06276 LinkIcon - -
-
ATH63p04221 LinkIcon - -
-
ATH63p04854 LinkIcon - -
-
ATH63p05645 LinkIcon - -
-
6 adp029083 LinkIcon Positive ATH06p10914 LinkIcon - -
-
ATH08p11695 LinkIcon - -
-
ATH11p10323 LinkIcon - -
-
ATH11p10326 LinkIcon - -
-
ATH11p10701 LinkIcon - -
-
ATH11p10987 LinkIcon - -
-
ATH13p12504 LinkIcon - -
-
ATH13p12507 LinkIcon - -
-
ATH13p12923 LinkIcon - -
-
ATH56p12651 LinkIcon - -
-
ATH61p13923 LinkIcon - -
-
ATH61p14653 LinkIcon - -
-
ATH63p14718 LinkIcon - -
-
ATH63p14721 LinkIcon - -
-
ATH63p15463 LinkIcon - -
-
ATH63p15466 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at3g54940
Papain family cysteine protease - Papain family cysteine protease; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, sepal, carpel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT2G21430.1); Has 7716 Blast hits to 7658 proteins in 713 species: Archae - 63; Bacteria - 225; Metazoa - 3256; Fungi - 4; Plants - 1843; Viruses - 138; Other Eukaryotes - 2187 (source: NCBI BLink).
2
at5g09970
cytochrome P450, family 78, subfamily A, polypeptide 7 member of CYP78A "cytochrome P450, family 78, subfamily A, polypeptide 7" (CYP78A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: regulation of meristem growth; EXPRESSED IN: embryo, leaf primordium, shoot lateral meristem, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

Creative Commons License
RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit