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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 2 " Y:" 21 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn060878 LinkIcon Negative ATH14n11269 LinkIcon PT204210 LinkIcon 0.967
Robinin; MS2; Q-Tof; [M-H]-
   Robinin
  Kaem-3-Rob-7-Rha
  Kaem-3-Gal-Rha-7-Rha
  kaempferol-3-O-robinoside-7-O-rhamnoside
  Kaempferol-3-O-galactose-rhamnose-7-O-rhamnose
  3-((6-O-(6-Deoxy-alpha-L-mannopyranosyl)-beta-D-galactopyranosyl)oxy)-7-((6-deoxy-alpha-L-mannopyranosyl)oxy)-5-hydroxy-2-(4-hydroxyphenyl)-4H-1-benzopyran-4-one
  5-hydroxy-2-(4-hydroxyphenyl)-7-[(2S,3R,4R,5R
ATH14n11272 LinkIcon PT204210 LinkIcon 0.959
Robinin; MS2; Q-Tof; [M-H]-
   Robinin
  Kaem-3-Rob-7-Rha
  Kaem-3-Gal-Rha-7-Rha
  kaempferol-3-O-robinoside-7-O-rhamnoside
  Kaempferol-3-O-galactose-rhamnose-7-O-rhamnose
  3-((6-O-(6-Deoxy-alpha-L-mannopyranosyl)-beta-D-galactopyranosyl)oxy)-7-((6-deoxy-alpha-L-mannopyranosyl)oxy)-5-hydroxy-2-(4-hydroxyphenyl)-4H-1-benzopyran-4-one
  5-hydroxy-2-(4-hydroxyphenyl)-7-[(2S,3R,4R,5R
ATH08n12833 LinkIcon PT204210 LinkIcon 0.953
Robinin; MS2; Q-Tof; [M-H]-
   Robinin
  Kaem-3-Rob-7-Rha
  Kaem-3-Gal-Rha-7-Rha
  kaempferol-3-O-robinoside-7-O-rhamnoside
  Kaempferol-3-O-galactose-rhamnose-7-O-rhamnose
  3-((6-O-(6-Deoxy-alpha-L-mannopyranosyl)-beta-D-galactopyranosyl)oxy)-7-((6-deoxy-alpha-L-mannopyranosyl)oxy)-5-hydroxy-2-(4-hydroxyphenyl)-4H-1-benzopyran-4-one
  5-hydroxy-2-(4-hydroxyphenyl)-7-[(2S,3R,4R,5R
ATH08n12836 LinkIcon PT204210 LinkIcon 0.940
Robinin; MS2; Q-Tof; [M-H]-
   Robinin
  Kaem-3-Rob-7-Rha
  Kaem-3-Gal-Rha-7-Rha
  kaempferol-3-O-robinoside-7-O-rhamnoside
  Kaempferol-3-O-galactose-rhamnose-7-O-rhamnose
  3-((6-O-(6-Deoxy-alpha-L-mannopyranosyl)-beta-D-galactopyranosyl)oxy)-7-((6-deoxy-alpha-L-mannopyranosyl)oxy)-5-hydroxy-2-(4-hydroxyphenyl)-4H-1-benzopyran-4-one
  5-hydroxy-2-(4-hydroxyphenyl)-7-[(2S,3R,4R,5R
ATH12n07292 LinkIcon PT204210 LinkIcon 0.939
Robinin; MS2; Q-Tof; [M-H]-
   Robinin
  Kaem-3-Rob-7-Rha
  Kaem-3-Gal-Rha-7-Rha
  kaempferol-3-O-robinoside-7-O-rhamnoside
  Kaempferol-3-O-galactose-rhamnose-7-O-rhamnose
  3-((6-O-(6-Deoxy-alpha-L-mannopyranosyl)-beta-D-galactopyranosyl)oxy)-7-((6-deoxy-alpha-L-mannopyranosyl)oxy)-5-hydroxy-2-(4-hydroxyphenyl)-4H-1-benzopyran-4-one
  5-hydroxy-2-(4-hydroxyphenyl)-7-[(2S,3R,4R,5R
ATH62n14107 LinkIcon PT211730 LinkIcon 0.937
Kaempferol-3-O-alpha-L-rhamnopyranosyl(1->2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside; MS2; Q-Tof; [M-H]-
   Kaempferol-3-O-alpha-L-rhamnopyranosyl(1-2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside
  kaem-3-(Rha-Glu)-7-Rha
  kaempferol-3-neohesperidoside-7-rhamnoside
PT209170 LinkIcon 0.936
Kaempferol-3-Glucoside-2-Rhamnoside,-7-Rhamnoside; MS2; Q-Tof; [M-H]-
   Kaempferol-3-Glucoside-2''-Rhamnoside-7-Rhamnoside
  Kaem-3-Glc-2''-Rha-7-Rha
ATH06n09690 LinkIcon PT204210 LinkIcon 0.932
Robinin; MS2; Q-Tof; [M-H]-
   Robinin
  Kaem-3-Rob-7-Rha
  Kaem-3-Gal-Rha-7-Rha
  kaempferol-3-O-robinoside-7-O-rhamnoside
  Kaempferol-3-O-galactose-rhamnose-7-O-rhamnose
  3-((6-O-(6-Deoxy-alpha-L-mannopyranosyl)-beta-D-galactopyranosyl)oxy)-7-((6-deoxy-alpha-L-mannopyranosyl)oxy)-5-hydroxy-2-(4-hydroxyphenyl)-4H-1-benzopyran-4-one
  5-hydroxy-2-(4-hydroxyphenyl)-7-[(2S,3R,4R,5R
ATH56n15443 LinkIcon PT209170 LinkIcon 0.932
Kaempferol-3-Glucoside-2-Rhamnoside,-7-Rhamnoside; MS2; Q-Tof; [M-H]-
   Kaempferol-3-Glucoside-2''-Rhamnoside-7-Rhamnoside
  Kaem-3-Glc-2''-Rha-7-Rha
PT211730 LinkIcon 0.931
Kaempferol-3-O-alpha-L-rhamnopyranosyl(1->2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside; MS2; Q-Tof; [M-H]-
   Kaempferol-3-O-alpha-L-rhamnopyranosyl(1-2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside
  kaem-3-(Rha-Glu)-7-Rha
  kaempferol-3-neohesperidoside-7-rhamnoside
ATH58n15325 LinkIcon PT209170 LinkIcon 0.931
Kaempferol-3-Glucoside-2-Rhamnoside,-7-Rhamnoside; MS2; Q-Tof; [M-H]-
   Kaempferol-3-Glucoside-2''-Rhamnoside-7-Rhamnoside
  Kaem-3-Glc-2''-Rha-7-Rha
  Kaempferol-3-O-alpha-L-rhamnopyranosyl(1-2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside
  kaem-3-(Rha-Glu)-7-Rha
  kaempferol-3-neohesperidoside-7-rhamnoside
ATH14n11269 LinkIcon PT211730 LinkIcon 0.925
Kaempferol-3-O-alpha-L-rhamnopyranosyl(1->2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside; MS2; Q-Tof; [M-H]-
   Kaempferol-3-O-alpha-L-rhamnopyranosyl(1-2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside
  kaem-3-(Rha-Glu)-7-Rha
  kaempferol-3-neohesperidoside-7-rhamnoside
PT209170 LinkIcon 0.921
Kaempferol-3-Glucoside-2-Rhamnoside,-7-Rhamnoside; MS2; Q-Tof; [M-H]-
   Kaempferol-3-Glucoside-2''-Rhamnoside-7-Rhamnoside
  Kaem-3-Glc-2''-Rha-7-Rha
ATH62n14107 LinkIcon PT204210 LinkIcon 0.916
Robinin; MS2; Q-Tof; [M-H]-
   Robinin
  Kaem-3-Rob-7-Rha
  Kaem-3-Gal-Rha-7-Rha
  kaempferol-3-O-robinoside-7-O-rhamnoside
  Kaempferol-3-O-galactose-rhamnose-7-O-rhamnose
  3-((6-O-(6-Deoxy-alpha-L-mannopyranosyl)-beta-D-galactopyranosyl)oxy)-7-((6-deoxy-alpha-L-mannopyranosyl)oxy)-5-hydroxy-2-(4-hydroxyphenyl)-4H-1-benzopyran-4-one
  5-hydroxy-2-(4-hydroxyphenyl)-7-[(2S,3R,4R,5R
ATH64n14292 LinkIcon PT209170 LinkIcon 0.907
Kaempferol-3-Glucoside-2-Rhamnoside,-7-Rhamnoside; MS2; Q-Tof; [M-H]-
   Kaempferol-3-Glucoside-2''-Rhamnoside-7-Rhamnoside
  Kaem-3-Glc-2''-Rha-7-Rha
PT211730 LinkIcon 0.903
Kaempferol-3-O-alpha-L-rhamnopyranosyl(1->2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside; MS2; Q-Tof; [M-H]-
   Kaempferol-3-O-alpha-L-rhamnopyranosyl(1-2)-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside
  kaem-3-(Rha-Glu)-7-Rha
  kaempferol-3-neohesperidoside-7-rhamnoside
ATH06n09687 LinkIcon - -
-
ATH07n10910 LinkIcon - -
-
ATH07n11099 LinkIcon - -
-
ATH09n13034 LinkIcon - -
-
ATH10n10425 LinkIcon - -
-
ATH11n07997 LinkIcon - -
-
ATH11n08088 LinkIcon - -
-
ATH12n07289 LinkIcon - -
-
ATH57n15343 LinkIcon - -
-
ATH59n15083 LinkIcon - -
-
ATH59n15338 LinkIcon - -
-
ATH61n14164 LinkIcon - -
-
ATH61n14406 LinkIcon - -
-
ATH62n14110 LinkIcon - -
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2. Gene information

No. ID Short description Curator summary Computational description
1
at1g02205
Fatty acid hydroxylase superfamily Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined. ECERIFERUM 1 (CER1); FUNCTIONS IN: aldehyde decarbonylase activity; INVOLVED IN: aldehyde catabolic process, wax biosynthetic process, cuticle development; LOCATED IN: endomembrane system, endoplasmic reticulum; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1); Has 341 Blast hits to 339 proteins in 49 species: Archae - 0; Bacteria - 44; Metazoa - 0; Fungi - 0; Plants - 284; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
2
at1g02340
basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a light-inducible, nuclear bHLH protein involved in phytochrome signaling. Mutants exhibit a long-hypocotyl phenotype only under far-red light but not under red light and are defective in other phytochrome A-related responses. Mutants also show blue light response defects. HFR1 interacts with COP1, co-localizes to the nuclear specks and is ubiquinated by COP1. LONG HYPOCOTYL IN FAR-RED (HFR1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome interacting factor 3 (TAIR:AT1G09530.2); Has 1715 Blast hits to 1709 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 4; Plants - 1707; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
3
at2g02780
Leucine-rich repeat protein kinase family protein - Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G14390.1); Has 90498 Blast hits to 51050 proteins in 1587 species: Archae - 36; Bacteria - 4349; Metazoa - 18583; Fungi - 1583; Plants - 60249; Viruses - 102; Other Eukaryotes - 5596 (source: NCBI BLink).
4
at2g23180
cytochrome P450, family 96, subfamily A, polypeptide 1 member of CYP96A "cytochrome P450, family 96, subfamily A, polypeptide 1" (CYP96A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 27906 Blast hits to 27823 proteins in 1447 species: Archae - 44; Bacteria - 2407; Metazoa - 10493; Fungi - 6010; Plants - 7891; Viruses - 3; Other Eukaryotes - 1058 (source: NCBI BLink).
5
at2g41540
6-phosphogluconate dehydrogenase family protein Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene. GPDHC1; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT3G07690.1); Has 4956 Blast hits to 4956 proteins in 1719 species: Archae - 20; Bacteria - 3172; Metazoa - 444; Fungi - 126; Plants - 154; Viruses - 0; Other Eukaryotes - 1040 (source: NCBI BLink).
6
at5g04770
cationic amino acid transporter 6 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane. cationic amino acid transporter 6 (CAT6); CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 7 (TAIR:AT3G10600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
7
at5g16440
isopentenyl diphosphate isomerase 1 Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway. isopentenyl diphosphate isomerase 1 (IPP1); FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity; INVOLVED IN: chlorophyll biosynthetic process, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), Isopentenyl-diphosphate delta-isomerase, type 1 (InterPro:IPR011876); BEST Arabidopsis thaliana protein match is: isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (TAIR:AT3G02780.1); Has 2226 Blast hits to 2225 proteins in 801 species: Archae - 35; Bacteria - 1199; Metazoa - 210; Fungi - 137; Plants - 180; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink).
8
at5g62360
Plant invertase/pectin methylesterase inhibitor superfamily protein - Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62350.1); Has 865 Blast hits to 858 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 7; Plants - 850; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

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