Choosing cell X:" 2 " Y:" 8 "
1. Metabolite information
No. | AtMetExp ID | Polality | MS2T ID | ReSpect | ||
---|---|---|---|---|---|---|
Accession | Score | Description | ||||
1 |
adp003050
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Positive |
ATH14p02163
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PM018191
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0.930 |
Tryptophan; MS2; Q-TOF; M+H; 15->55V
Tryptophan
|
ATH10p01349
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PS027301
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0.928 |
L-Glutamine; MS2; QqQ; positive; CE 10 V
L-Glutamine Q Gln L-Glutamic acid 5-amide (S)-2,5-Diamino-5-oxopentanoic acid L-2-Aminoglutaramic acid Levoglutamide Cebrogen Glumin
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PS071901
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0.925 |
L-(+)-Lysine; MS2; QqQ; positive; CE 10 V
L-(+)-Lysine Lys Lysine acid 2,6-diaminohexanoic acid
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||||
PS028101
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0.924 |
L-Lysine monohydrochloride; MS2; QqQ; positive; CE 10 V
L-Lysine monohydrochloride Lys (S)-2,6-Diaminohexanoic acid monohydrochloride Lysine acid
|
||||
ATH08p00808
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PM018191
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0.903 |
Tryptophan; MS2; Q-TOF; M+H; 15->55V
Tryptophan
|
|||
ATH06p00812
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- | - |
-
|
|||
ATH06p01616
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- | - |
-
|
|||
ATH07p00818
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- | - |
-
|
|||
ATH07p01616
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- | - |
-
|
|||
ATH08p01612
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- | - |
-
|
|||
ATH09p00827
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- | - |
-
|
|||
ATH09p01631
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- | - |
-
|
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ATH11p00826
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- | - |
-
|
|||
ATH11p01630
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- | - |
-
|
|||
ATH12p00803
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- | - |
-
|
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ATH12p01607
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- | - |
-
|
|||
ATH13p00818
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- | - |
-
|
|||
ATH13p01621
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- | - |
-
|
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ATH13p01892
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- | - |
-
|
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ATH14p01359
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- | - |
-
|
|||
ATH56p00861
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- | - |
-
|
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ATH56p01665
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- | - |
-
|
|||
ATH58p00857
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- | - |
-
|
|||
ATH58p01661
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- | - |
-
|
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ATH59p00855
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- | - |
-
|
|||
ATH61p02718
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- | - |
-
|
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ATH61p03256
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- | - |
-
|
|||
ATH62p01663
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- | - |
-
|
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ATH63p00855
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- | - |
-
|
|||
ATH63p01385
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- | - |
-
|
|||
ATH63p01923
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- | - |
-
|
|||
ATH63p01927
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- | - |
-
|
|||
ATH64p00852
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- | - |
-
|
|||
ATH64p01656
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- | - |
-
|
2. Gene information
No. | ID | Short description | Curator summary | Computational description |
---|---|---|---|---|
1 |
at1g32870
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NAC domain protein 13 | - | NAC domain protein 13 (NAC13); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 16 (TAIR:AT1G34180.1); Has 2951 Blast hits to 2946 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 2931; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). |
2 |
at1g54290
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Translation initiation factor SUI1 family protein | - | Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT4G27130.1); Has 846 Blast hits to 843 proteins in 268 species: Archae - 14; Bacteria - 1; Metazoa - 362; Fungi - 162; Plants - 197; Viruses - 5; Other Eukaryotes - 105 (source: NCBI BLink). |
3 |
at1g77370
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Glutaredoxin family protein | - | Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G20500.1); Has 6011 Blast hits to 6006 proteins in 1282 species: Archae - 24; Bacteria - 3163; Metazoa - 423; Fungi - 346; Plants - 622; Viruses - 111; Other Eukaryotes - 1322 (source: NCBI BLink). |
4 |
at2g03060
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AGAMOUS-like 30 | Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL30 is expressed in pollen.It forms heterodimers with other MICK family members. | AGAMOUS-like 30 (AGL30); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 94 (TAIR:AT1G69540.1); Has 5791 Blast hits to 5791 proteins in 704 species: Archae - 0; Bacteria - 0; Metazoa - 613; Fungi - 306; Plants - 4796; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). |
5 |
at2g04350
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AMP-dependent synthetase and ligase family protein | - | long-chain acyl-CoA synthetase 8 (LACS8); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity, catalytic activity; INVOLVED IN: fatty acid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long chain acyl-CoA synthetase 9 (TAIR:AT1G77590.1); Has 68120 Blast hits to 56487 proteins in 3592 species: Archae - 1085; Bacteria - 46156; Metazoa - 2682; Fungi - 3484; Plants - 2089; Viruses - 2; Other Eukaryotes - 12622 (source: NCBI BLink). |
6 |
at2g18170
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MAP kinase 7 | - | MAP kinase 7 (MPK7); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase 14 (TAIR:AT4G36450.1); Has 121649 Blast hits to 120256 proteins in 4623 species: Archae - 97; Bacteria - 12437; Metazoa - 46483; Fungi - 12286; Plants - 29603; Viruses - 478; Other Eukaryotes - 20265 (source: NCBI BLink). |
7 |
at2g21270
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ubiquitin fusion degradation 1 | - | ubiquitin fusion degradation 1 (UFD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G38930.2); Has 702 Blast hits to 700 proteins in 221 species: Archae - 8; Bacteria - 2; Metazoa - 164; Fungi - 209; Plants - 127; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). |
8 |
at2g29060
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GRAS family transcription factor | - | GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 14 (TAIR:AT1G07530.1); Has 4860 Blast hits to 2426 proteins in 308 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 0; Plants - 4833; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). |
9 |
at3g47060
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FTSH protease 7 | encodes an FtsH protease that is localized to the chloroplast | FTSH protease 7 (ftsh7); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 9 (TAIR:AT5G58870.1); Has 41243 Blast hits to 38738 proteins in 3322 species: Archae - 1531; Bacteria - 17472; Metazoa - 4873; Fungi - 3612; Plants - 3353; Viruses - 32; Other Eukaryotes - 10370 (source: NCBI BLink). |
10 |
at3g50210
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2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | - | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: aging, cellular response to starvation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G49630.1); Has 8820 Blast hits to 8765 proteins in 1007 species: Archae - 0; Bacteria - 1171; Metazoa - 121; Fungi - 1080; Plants - 4768; Viruses - 0; Other Eukaryotes - 1680 (source: NCBI BLink). |
11 |
at4g08180
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OSBP(oxysterol binding protein)-related protein 1C | - | OSBP(oxysterol binding protein)-related protein 1C (ORP1C); FUNCTIONS IN: phosphoinositide binding, oxysterol binding; INVOLVED IN: steroid metabolic process, signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 2760 Blast hits to 2567 proteins in 218 species: Archae - 0; Bacteria - 4; Metazoa - 1466; Fungi - 697; Plants - 301; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). |
12 |
at4g11350
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Protein of unknown function (DUF604) | - | Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 568 Blast hits to 557 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 181; Plants - 281; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
13 |
at4g15940
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Fumarylacetoacetate (FAA) hydrolase family | - | Fumarylacetoacetate (FAA) hydrolase family; FUNCTIONS IN: copper ion binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234); BEST Arabidopsis thaliana protein match is: Fumarylacetoacetate (FAA) hydrolase family (TAIR:AT3G16700.1); Has 10822 Blast hits to 10670 proteins in 1907 species: Archae - 249; Bacteria - 6730; Metazoa - 306; Fungi - 435; Plants - 75; Viruses - 0; Other Eukaryotes - 3027 (source: NCBI BLink). |
14 |
at4g35300
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tonoplast monosaccharide transporter2 | - | tonoplast monosaccharide transporter2 (TMT2); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, nucleoside transmembrane transporter activity; INVOLVED IN: response to fructose stimulus, response to salt stress, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter3 (TAIR:AT3G51490.2); Has 51368 Blast hits to 39283 proteins in 2480 species: Archae - 776; Bacteria - 26387; Metazoa - 6850; Fungi - 11680; Plants - 3625; Viruses - 0; Other Eukaryotes - 2050 (source: NCBI BLink). |
15 |
at4g35580
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NAC transcription factor-like 9 | - | NAC transcription factor-like 9 (NTL9); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC 014 (TAIR:AT1G33060.1); Has 3027 Blast hits to 3020 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3027; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
16 |
at4g37320
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cytochrome P450, family 81, subfamily D, polypeptide 5 | member of CYP81D | "cytochrome P450, family 81, subfamily D, polypeptide 5" (CYP81D5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 4 (TAIR:AT4G37330.1); Has 34217 Blast hits to 34042 proteins in 1758 species: Archae - 61; Bacteria - 4626; Metazoa - 11716; Fungi - 7014; Plants - 9489; Viruses - 3; Other Eukaryotes - 1308 (source: NCBI BLink). |
17 |
at5g15020
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SIN3-like 2 | Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190). | SIN3-like 2 (SNL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 1 (TAIR:AT3G01320.1); Has 7665 Blast hits to 4944 proteins in 497 species: Archae - 53; Bacteria - 740; Metazoa - 2798; Fungi - 1391; Plants - 712; Viruses - 253; Other Eukaryotes - 1718 (source: NCBI BLink). |
18 |
at5g16680
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RING/FYVE/PHD zinc finger superfamily protein | - | RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT3G02890.1); Has 6870 Blast hits to 4822 proteins in 413 species: Archae - 8; Bacteria - 605; Metazoa - 3213; Fungi - 704; Plants - 729; Viruses - 19; Other Eukaryotes - 1592 (source: NCBI BLink). |
19 |
at5g41800
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Transmembrane amino acid transporter family protein | - | Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G08230.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
20 |
at5g44240
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aminophospholipid ATPase 2 | - | aminophospholipid ATPase 2 (ALA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: aminophospholipid ATPase 1 (TAIR:AT5G04930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
21 |
at5g57610
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Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain | - | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 119780 Blast hits to 118332 proteins in 4796 species: Archae - 124; Bacteria - 12838; Metazoa - 46034; Fungi - 10270; Plants - 32306; Viruses - 451; Other Eukaryotes - 17757 (source: NCBI BLink). |
Integrated Genome Informatics Research Unit