Choosing cell X:" 3 " Y:" 21 "
1. Metabolite information
| No. | AtMetExp ID | Polality | MS2T ID | ReSpect | ||
|---|---|---|---|---|---|---|
| Accession | Score | Description | ||||
| 1 |
adp000695
|
Positive |
ATH08p00553
|
PT102890
|
0.999 |
L-Threonine; MS2; Q-Tof; [M+H]+
L-Threonine Thr beta-Methylserine L-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutanoic Acid (2S,3R)-2-amino-3-hydroxybutanoic acid
|
|
ATH11p00551
|
PT102890
|
0.995 |
L-Threonine; MS2; Q-Tof; [M+H]+
L-Threonine Thr beta-Methylserine L-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutanoic Acid (2S,3R)-2-amino-3-hydroxybutanoic acid
|
|||
|
ATH61p01884
|
PT102890
|
0.993 |
L-Threonine; MS2; Q-Tof; [M+H]+
L-Threonine Thr beta-Methylserine L-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutanoic Acid (2S,3R)-2-amino-3-hydroxybutanoic acid
|
|||
|
PT103800
|
0.990 |
alpha-Methyl-DL-serine; MS2; Q-Tof; [M+H]+
alpha-Methyl-DL-serine DL-2-Methylserine 2-Amino-3-hydroxy-2-methylpropanoic Acid DL-2-Amino-3-hydroxy-2-methylpropionic Acid DL-alpha-(Hydroxymethyl)alanine (2R)-2-amino-3-hydroxy-2-methylpropanoic acid
|
||||
|
ATH08p00553
|
PT103800
|
0.989 |
alpha-Methyl-DL-serine; MS2; Q-Tof; [M+H]+
alpha-Methyl-DL-serine DL-2-Methylserine 2-Amino-3-hydroxy-2-methylpropanoic Acid DL-2-Amino-3-hydroxy-2-methylpropionic Acid DL-alpha-(Hydroxymethyl)alanine (2R)-2-amino-3-hydroxy-2-methylpropanoic acid
|
|||
|
ATH11p00551
|
PT103800
|
0.980 |
alpha-Methyl-DL-serine; MS2; Q-Tof; [M+H]+
alpha-Methyl-DL-serine DL-2-Methylserine 2-Amino-3-hydroxy-2-methylpropanoic Acid DL-2-Amino-3-hydroxy-2-methylpropionic Acid DL-alpha-(Hydroxymethyl)alanine (2R)-2-amino-3-hydroxy-2-methylpropanoic acid
|
|||
|
ATH62p00566
|
PT103800
|
0.972 |
alpha-Methyl-DL-serine; MS2; Q-Tof; [M+H]+
alpha-Methyl-DL-serine DL-2-Methylserine 2-Amino-3-hydroxy-2-methylpropanoic Acid DL-2-Amino-3-hydroxy-2-methylpropionic Acid DL-alpha-(Hydroxymethyl)alanine (2R)-2-amino-3-hydroxy-2-methylpropanoic acid
|
|||
|
ATH09p00556
|
PT102890
|
0.969 |
L-Threonine; MS2; Q-Tof; [M+H]+
L-Threonine Thr beta-Methylserine L-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutanoic Acid (2S,3R)-2-amino-3-hydroxybutanoic acid
|
|||
|
ATH62p00566
|
PT102890
|
0.969 |
L-Threonine; MS2; Q-Tof; [M+H]+
L-Threonine Thr beta-Methylserine L-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutanoic Acid (2S,3R)-2-amino-3-hydroxybutanoic acid
|
|||
|
ATH10p00550
|
PT106280
|
0.966 |
L-Homoserine; MS2; Q-Tof; [M+H]+
L-Homoserine Hse HoSer (S)-2-Amino-4-hydroxybutyric acid 2-Amino-4-hydroxybutanoic acid (2S)-2-amino-4-hydroxybutanoic acid
|
|||
|
PS038002
|
0.958 |
alpha-Methyl-DL-serine; MS2; QqQ; positive; CE 20 V
alpha-Methyl-DL-serine DL-2-Methylserine 2-Amino-3-hydroxy-2-methylpropanoic Acid DL-2-Amino-3-hydroxy-2-methylpropionic Acid DL-alpha-(Hydroxymethyl)alanine
|
||||
|
PT103800
|
0.954 |
alpha-Methyl-DL-serine; MS2; Q-Tof; [M+H]+
alpha-Methyl-DL-serine DL-2-Methylserine 2-Amino-3-hydroxy-2-methylpropanoic Acid DL-2-Amino-3-hydroxy-2-methylpropionic Acid DL-alpha-(Hydroxymethyl)alanine (2R)-2-amino-3-hydroxy-2-methylpropanoic acid
|
||||
|
ATH61p01884
|
PT106280
|
0.951 |
L-Homoserine; MS2; Q-Tof; [M+H]+
L-Homoserine Hse HoSer (S)-2-Amino-4-hydroxybutyric acid 2-Amino-4-hydroxybutanoic acid (2S)-2-amino-4-hydroxybutanoic acid
|
|||
|
ATH62p00566
|
PT106280
|
0.948 |
L-Homoserine; MS2; Q-Tof; [M+H]+
L-Homoserine Hse HoSer (S)-2-Amino-4-hydroxybutyric acid 2-Amino-4-hydroxybutanoic acid (2S)-2-amino-4-hydroxybutanoic acid
|
|||
|
ATH10p00550
|
PS062802
|
0.947 |
L-Homoserine; MS2; QqQ; positive; CE 20 V
L-Homoserine Hse HoSer (S)-2-Amino-4-hydroxybutyric acid 2-Amino-4-hydroxybutanoic acid
|
|||
|
ATH61p01884
|
PS038002
|
0.947 |
alpha-Methyl-DL-serine; MS2; QqQ; positive; CE 20 V
alpha-Methyl-DL-serine DL-2-Methylserine 2-Amino-3-hydroxy-2-methylpropanoic Acid DL-2-Amino-3-hydroxy-2-methylpropionic Acid DL-alpha-(Hydroxymethyl)alanine
|
|||
|
ATH08p00553
|
PT106280
|
0.945 |
L-Homoserine; MS2; Q-Tof; [M+H]+
L-Homoserine Hse HoSer (S)-2-Amino-4-hydroxybutyric acid 2-Amino-4-hydroxybutanoic acid (2S)-2-amino-4-hydroxybutanoic acid
|
|||
|
ATH12p00548
|
PT102890
|
0.944 |
L-Threonine; MS2; Q-Tof; [M+H]+
L-Threonine Thr beta-Methylserine L-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutanoic Acid (2S,3R)-2-amino-3-hydroxybutanoic acid
|
|||
|
ATH08p00553
|
PS038002
|
0.943 |
alpha-Methyl-DL-serine; MS2; QqQ; positive; CE 20 V
alpha-Methyl-DL-serine DL-2-Methylserine 2-Amino-3-hydroxy-2-methylpropanoic Acid DL-2-Amino-3-hydroxy-2-methylpropionic Acid DL-alpha-(Hydroxymethyl)alanine
|
|||
|
ATH58p00291
|
PS056001
|
0.942 |
Methylglyoxal solution ; MS2; QqQ; positive; CE 10 V
Methylglyoxal solution Pyruvaldehyde Pyruvic aldehyde Acetylformaldehyde alpha-Ketopropionaldehyde Propanolone 2-Oxopropionaldehyde 2-Oxopropanal Propanedione
|
|||
|
ATH62p00566
|
PS038002
|
0.941 |
alpha-Methyl-DL-serine; MS2; QqQ; positive; CE 20 V
alpha-Methyl-DL-serine DL-2-Methylserine 2-Amino-3-hydroxy-2-methylpropanoic Acid DL-2-Amino-3-hydroxy-2-methylpropionic Acid DL-alpha-(Hydroxymethyl)alanine
|
|||
|
PS027003
|
0.934 |
L-Cystine; MS2; QqQ; positive; CE 30 V
L-Cystine Cys L-Dicysteine L-alpha-Diamino-beta-dithiolactic acid (R,R)-3,3'-Dithiobis(2-aminopropionicacid) beta.,.beta'-Dithiodialanine
|
||||
|
ATH11p00551
|
PT106280
|
0.932 |
L-Homoserine; MS2; Q-Tof; [M+H]+
L-Homoserine Hse HoSer (S)-2-Amino-4-hydroxybutyric acid 2-Amino-4-hydroxybutanoic acid (2S)-2-amino-4-hydroxybutanoic acid
|
|||
|
ATH09p00556
|
PT103800
|
0.929 |
alpha-Methyl-DL-serine; MS2; Q-Tof; [M+H]+
alpha-Methyl-DL-serine DL-2-Methylserine 2-Amino-3-hydroxy-2-methylpropanoic Acid DL-2-Amino-3-hydroxy-2-methylpropionic Acid DL-alpha-(Hydroxymethyl)alanine (2R)-2-amino-3-hydroxy-2-methylpropanoic acid
|
|||
|
ATH62p00566
|
PS062802
|
0.921 |
L-Homoserine; MS2; QqQ; positive; CE 20 V
L-Homoserine Hse HoSer (S)-2-Amino-4-hydroxybutyric acid 2-Amino-4-hydroxybutanoic acid
|
|||
|
ATH12p00548
|
PT106950
|
0.919 |
L-allo-threonine; MS2; Q-Tof; [M+H]+
L-allo-threonine allo-Thr L-Allothreonine (2S,3S)-2-Amino-3-hydroxybutyric Acid (2S,3S)-2-amino-3-hydroxybutanoic acid
|
|||
|
ATH10p00550
|
PT102890
|
0.917 |
L-Threonine; MS2; Q-Tof; [M+H]+
L-Threonine Thr beta-Methylserine L-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutyric acid (2S,3R)-2-Amino-3-hydroxybutanoic Acid (2S,3R)-2-amino-3-hydroxybutanoic acid
|
|||
|
ATH58p00291
|
PS009704
|
0.916 |
Phytol,mixture of isomers; MS2; QqQ; positive; CE 40 V
Phytol,mixture of isomers 3,7,11,15-Tetramethyl-2-hexadecen-1-ol
|
|||
|
ATH61p01884
|
PS062802
|
0.916 |
L-Homoserine; MS2; QqQ; positive; CE 20 V
L-Homoserine Hse HoSer (S)-2-Amino-4-hydroxybutyric acid 2-Amino-4-hydroxybutanoic acid
|
|||
|
ATH08p00553
|
PS062802
|
0.915 |
L-Homoserine; MS2; QqQ; positive; CE 20 V
L-Homoserine Hse HoSer (S)-2-Amino-4-hydroxybutyric acid 2-Amino-4-hydroxybutanoic acid
|
|||
|
ATH10p00550
|
PM000914
|
0.914 |
L-Homoserine; MS2; QqQ; M+H; 16
L-Homoserine
|
|||
|
ATH61p01884
|
PS027003
|
0.914 |
L-Cystine; MS2; QqQ; positive; CE 30 V
L-Cystine Cys L-Dicysteine L-alpha-Diamino-beta-dithiolactic acid (R,R)-3,3'-Dithiobis(2-aminopropionicacid) beta.,.beta'-Dithiodialanine
|
|||
|
ATH11p00551
|
PS038002
|
0.911 |
alpha-Methyl-DL-serine; MS2; QqQ; positive; CE 20 V
alpha-Methyl-DL-serine DL-2-Methylserine 2-Amino-3-hydroxy-2-methylpropanoic Acid DL-2-Amino-3-hydroxy-2-methylpropionic Acid DL-alpha-(Hydroxymethyl)alanine
|
|||
|
ATH58p00291
|
PS008301
|
0.911 |
Acrylic acid; MS2; QqQ; positive; CE 10 V
Acrylic acid Propenoate Acrylate 2-Propenolc acid Ethylenecarboxylic acid Vinylformic acid
|
|||
|
ATH08p00553
|
PS021802
|
0.907 |
DL-threo-beta-Methylaspartic acid; MS2; QqQ; positive; CE 20 V
DL-threo-beta-Methylaspartic acid beta-methylaspartate 2-Amino-3-methylsuccinic acid
|
|||
|
ATH10p00550
|
PS104803
|
0.907 |
Carbamoyl-DL-aspartic acid; MS2; QqQ; positive; CE 30 V
Carbamoyl-DL-aspartic acid N-Carbamoylaspartate Ureidosuccinic acid N-(aminocarbonyl)-DL-aspartic acid N-Carbamyl-DL-aspartic acid
|
|||
|
ATH09p00556
|
PT106950
|
0.903 |
L-allo-threonine; MS2; Q-Tof; [M+H]+
L-allo-threonine allo-Thr L-Allothreonine (2S,3S)-2-Amino-3-hydroxybutyric Acid (2S,3S)-2-amino-3-hydroxybutanoic acid
|
|||
|
ATH12p00548
|
PT106590
|
0.901 |
O-Acetyl-L-homoserine hydrochloride; MS2; Q-Tof; [M+H]+
O-Acetyl-L-homoserine hydrochloride Ac-HSer (2S)-4-(acetyloxy)-2-aminobutanoic acid (2S)-4-acetyloxy-2-aminobutanoic acid
|
|||
|
ATH63p00291
|
- | - |
-
|
|||
| 2 |
adp041082
|
Positive |
ATH62p14718
|
PS062202
|
0.987 |
Disodium Glycerophoshate 5.5-Hydrate; MS2; QqQ; positive; CE 20 V
Disodium Glycerophoshate 5.5-Hydrate Glycerol Phosphate
|
|
PS010802
|
0.982 |
Lithium potassium Acetyl phosphate; MS2; QqQ; positive; CE 20 V
Lithium potassium Acetyl phosphate Acetyl phosphate lithium potassium salt
|
||||
|
PS078302
|
0.979 |
L-Glycerol-2-phosphate Disodium Salt n-Hydrate; MS2; QqQ; positive; CE 20 V
L-Glycerol-2-phosphate Disodium Salt n-Hydrate Glycerophosphate
|
||||
|
PS033502
|
0.972 |
rac-Glycerol 3-phosphoate disodium salt hexahydrate; MS2; QqQ; positive; CE 20 V
rac-Glycerol 3-phosphoate disodium salt hexahydrate sn-Gro-1P glycero-3P glycero-1P glycerophosphoric acid rac-Glycerol 1-phosphate DL-alpha-Glycerophosphate
|
||||
|
PT103250
|
0.967 |
4-Nitrophenol; MS2; Q-Tof; [M+H]+
4-Nitrophenol PNP p-Nitrophenol 4-Nitrohydroxybenzene 4-Hydroxynitrobenzene Niphen Paranitrophenol 4-nitrophenol
|
||||
|
PS058903
|
0.965 |
DL-Glyceraldehyde 3-phosphate solution; MS2; QqQ; positive; CE 30 V
DL-Glyceraldehyde 3-phosphate solution Glyceraldehyde-3P
|
||||
|
PS109801
|
0.964 |
Maleic acid; MS2; QqQ; positive; CE 10 V
Maleic acid Maleinic acid Malenic acid Toxilic acid cis-butenedioic acid maleate Maleinic acid Malenic acid 2-Butenedioic acid (Z)-1,2-Ethenedicarboxylic Acid
|
||||
|
PS123201
|
0.962 |
alpha-L-(-)-Fucose 1-phosphate bis(cyclohexylammonium) salt ; MS2; QqQ; positive; CE 10 V
alpha-L-(-)-Fucose 1-phosphate bis(cyclohexylammonium) salt alpha-Fuc-1P alpha-Fucopyranosyl phosphate 6-Deoxy-alpha-L-galactose phosphate
|
||||
|
PS112603
|
0.957 |
alpha-D-glucose-1-phosphate dipotassium salt dihydate; MS2; QqQ; positive; CE 30 V
alpha-D-glucose-1-phosphate dipotassium salt dihydate alpha-Glu-1P alpha-D-Glucopyranose 1-phosphate
|
||||
|
PS058902
|
0.948 |
DL-Glyceraldehyde 3-phosphate solution; MS2; QqQ; positive; CE 20 V
DL-Glyceraldehyde 3-phosphate solution Glyceraldehyde-3P
|
||||
|
ATH09p11884
|
PT112530
|
0.900 |
Calciferol; MS2; Q-Tof; [M+H]+
Calciferol Vitamin D2 Ergocalciferol Viosterin Osteil Viosterol Ercalciol Irradiated ergosterol Condacaps Condocaps Condol Crtron Crystallina Daral (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol Davitin Deltalin Deratol Diactol Drisdol Ergorone Ertron Fortodyl Geltabs Hyperkil Irradiated ergosta-5,7,22-trien-3-beta-ol Metadee
|
|||
|
ATH06p12431
|
- | - |
-
|
|||
|
ATH08p13172
|
- | - |
-
|
|||
|
ATH11p12003
|
- | - |
-
|
|||
|
ATH63p15323
|
- | - |
-
|
|||
2. Gene information
| No. | ID | Short description | Curator summary | Computational description |
|---|---|---|---|---|
| 1 |
at1g01250
|
Integrase-type DNA-binding superfamily protein | encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. | Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G25810.1); Has 5404 Blast hits to 5361 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5399; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
| 2 |
at1g23205
|
Plant invertase/pectin methylesterase inhibitor superfamily protein | - | Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G70720.1); Has 800 Blast hits to 793 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 800; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
| 3 |
at1g32170
|
xyloglucan endotransglucosylase/hydrolase 30 | xyloglucan endotransglycosylase-related protein (XTR4) | xyloglucan endotransglucosylase/hydrolase 30 (XTH30); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 29 (TAIR:AT4G18990.1); Has 2058 Blast hits to 2046 proteins in 299 species: Archae - 2; Bacteria - 244; Metazoa - 0; Fungi - 398; Plants - 1344; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). |
| 4 |
at1g53700
|
WAG 1 | The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons. | WAG 1 (WAG1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G14370.1); Has 97126 Blast hits to 96120 proteins in 2766 species: Archae - 63; Bacteria - 12090; Metazoa - 36361; Fungi - 11348; Plants - 19901; Viruses - 394; Other Eukaryotes - 16969 (source: NCBI BLink). |
| 5 |
at1g63690
|
SIGNAL PEPTIDE PEPTIDASE-LIKE 2 | - | SIGNAL PEPTIDE PEPTIDASE-LIKE 2 (SPPL2); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endosome, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 4 (TAIR:AT1G01650.1); Has 1779 Blast hits to 1755 proteins in 292 species: Archae - 1; Bacteria - 179; Metazoa - 755; Fungi - 159; Plants - 440; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). |
| 6 |
at1g79630
|
Protein phosphatase 2C family protein | - | Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G16220.1); Has 5543 Blast hits to 5523 proteins in 290 species: Archae - 2; Bacteria - 8; Metazoa - 1342; Fungi - 594; Plants - 2451; Viruses - 5; Other Eukaryotes - 1141 (source: NCBI BLink). |
| 7 |
at2g25530
|
AFG1-like ATPase family protein | - | AFG1-like ATPase family protein; FUNCTIONS IN: ATPase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AFG1-like (InterPro:IPR005654); BEST Arabidopsis thaliana protein match is: AFG1-like ATPase family protein (TAIR:AT4G28070.2); Has 3822 Blast hits to 3815 proteins in 1065 species: Archae - 0; Bacteria - 1862; Metazoa - 150; Fungi - 200; Plants - 101; Viruses - 0; Other Eukaryotes - 1509 (source: NCBI BLink). |
| 8 |
at2g28630
|
3-ketoacyl-CoA synthase 12 | Encodes KCS12, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). | 3-ketoacyl-CoA synthase 12 (KCS12); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: response to osmotic stress; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 3 (TAIR:AT1G07720.1); Has 2195 Blast hits to 2173 proteins in 528 species: Archae - 0; Bacteria - 1011; Metazoa - 0; Fungi - 4; Plants - 1037; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). |
| 9 |
at2g31650
|
homologue of trithorax | Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Involved in trimethylating histone H3-lysine 4. Involved in the formation, placement, and identity of flower organs. Role in regulation of homeotic genes. Functions as a receptor of phosphatidylinositol 5-phosphate. Localizes to cytoplasm, plasma membrane and nuclei, shifting to nuclei in the presence of PI5P. | homologue of trithorax (ATX1); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, C-terminal (InterPro:IPR003889), Post-SET domain (InterPro:IPR003616), FY-rich, N-terminal (InterPro:IPR003888), Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Lamin-B receptor of TUDOR domain (InterPro:IPR019023), FY-rich, C-terminal subgroup (InterPro:IPR018516), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), PWWP (InterPro:IPR000313), FY-rich, N-terminal subgroup (InterPro:IPR018518), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: trithorax-like protein 2 (TAIR:AT1G05830.2); Has 7192 Blast hits to 6948 proteins in 474 species: Archae - 2; Bacteria - 393; Metazoa - 3480; Fungi - 840; Plants - 1251; Viruses - 0; Other Eukaryotes - 1226 (source: NCBI BLink). |
| 10 |
at2g38400
|
alanine:glyoxylate aminotransferase 3 | alanine:glyoxylate aminotransferase 2 homolog (AGT3) mRNA, | alanine:glyoxylate aminotransferase 3 (AGT3); FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, alanine-glyoxylate transaminase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: PYRIMIDINE 4 (TAIR:AT3G08860.1); Has 36057 Blast hits to 36036 proteins in 2736 species: Archae - 736; Bacteria - 23005; Metazoa - 660; Fungi - 839; Plants - 398; Viruses - 17; Other Eukaryotes - 10402 (source: NCBI BLink). |
| 11 |
at2g44740
|
cyclin p4;1 | - | cyclin p4;1 (CYCP4;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN P4;2 (TAIR:AT5G61650.1); Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 247; Fungi - 710; Plants - 236; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). |
| 12 |
at3g06850
|
2-oxoacid dehydrogenases acyltransferase family protein | dihydrolipoamide branched chain acyltransferase | BCE2; FUNCTIONS IN: acetyltransferase activity, dihydrolipoamide branched chain acyltransferase activity, alpha-ketoacid dehydrogenase activity, zinc ion binding; INVOLVED IN: response to light stimulus, response to sucrose stimulus; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Lipoamide Acyltransferase (InterPro:IPR015761); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 20964 Blast hits to 19078 proteins in 2320 species: Archae - 110; Bacteria - 11780; Metazoa - 568; Fungi - 442; Plants - 349; Viruses - 0; Other Eukaryotes - 7715 (source: NCBI BLink). |
| 13 |
at3g17130
|
Plant invertase/pectin methylesterase inhibitor superfamily protein | - | Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: cell wall / vacuolar inhibitor of fructosidase 1 (TAIR:AT1G47960.1); Has 102 Blast hits to 102 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
| 14 |
at3g47600
|
myb domain protein 94 | Encodes a putative transcription factor (MYB94). | myb domain protein 94 (MYB94); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 8929 Blast hits to 8284 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 491; Plants - 5808; Viruses - 4; Other Eukaryotes - 1790 (source: NCBI BLink). |
| 15 |
at3g61880
|
cytochrome p450 78a9 | Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis. | cytochrome p450 78a9 (CYP78A9); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: fruit development; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, flower development stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1); Has 32342 Blast hits to 32220 proteins in 1730 species: Archae - 48; Bacteria - 3539; Metazoa - 11622; Fungi - 6799; Plants - 9227; Viruses - 3; Other Eukaryotes - 1104 (source: NCBI BLink). |
| 16 |
at4g17483
|
alpha/beta-Hydrolases superfamily protein | - | alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: palmitoyl-(protein) hydrolase activity; INVOLVED IN: protein modification process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Palmitoyl protein thioesterase (InterPro:IPR002472); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G17480.1); Has 614 Blast hits to 610 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 94; Plants - 140; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). |
| 17 |
at4g18270
|
translocase 11 | Encodes protein similar to similar to bacterial translocase I (mra Y). Expressed during flower bud development. | translocase 11 (TRANS11); CONTAINS InterPro DOMAIN/s: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site (InterPro:IPR018480), Phospho-N-acetylmuramoyl-pentapeptide transferase (InterPro:IPR003524), Glycosyl transferase, family 4 (InterPro:IPR000715), Glycosyl transferase, family 4, conserved region (InterPro:IPR018481); Has 1367 Blast hits to 1365 proteins in 548 species: Archae - 16; Bacteria - 1334; Metazoa - 1; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
| 18 |
at4g34588
|
conserved peptide upstream open reading frame 2 | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF2 represents a conserved upstream opening reading frame relative to major ORF AT4G34590.1 | conserved peptide upstream open reading frame 2 (CPuORF2); LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 5 (TAIR:AT1G75388.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
| 19 |
at4g34590
|
G-box binding factor 6 | Encodes a basic domain leucine zipper (bZip) transcription factor bZIP11. Translation is repressed by sucrose. Directly regulates gene expression of ASN1 and ProDH2, which are enzyme-coding genes involved in amino acid metabolism. | G-box binding factor 6 (GBF6); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sucrose induced translational repression, negative regulation of translation, regulation of transcription, DNA-dependent, response to sucrose stimulus; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1778 Blast hits to 1778 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 2; Plants - 1730; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). |
| 20 |
at5g12950
|
Putative glycosyl hydrolase of unknown function (DUF1680) | - | FUNCTIONS IN: catalytic activity; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: stem, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1680 (InterPro:IPR012878), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Putative glycosyl hydrolase of unknown function (DUF1680) (TAIR:AT5G12960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
| 21 |
at5g12960
|
Putative glycosyl hydrolase of unknown function (DUF1680) | - | FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1680 (InterPro:IPR012878), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Putative glycosyl hydrolase of unknown function (DUF1680) (TAIR:AT5G12950.1); Has 1236 Blast hits to 1216 proteins in 340 species: Archae - 6; Bacteria - 1067; Metazoa - 2; Fungi - 28; Plants - 90; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). |
Integrated Genome Informatics Research Unit