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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Keyword
AGI locus IDs

Choosing cell X:" 4 " Y:" 5 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn003961 LinkIcon Negative ATH08n00832 LinkIcon PT202720 LinkIcon 0.998
L-Glutamic acid; MS2; Q-Tof; [M-H]-
   L-Glutamic acid
  Glu
  L-Glutamate
  alpha-Glutamic acid
  L-alpha-Aminoglutaric Acid
  (S)-2-Aminopentanedioic acid
  L-1-Aminopropane-1,3-dicarboxylic Acid
  1-Aminopropane-1,3-dicarboxylic acid
  Aciglut
  Glusate
  Glutacid
  Glutaminol
  Glutaton
  (2S)-2-aminopentanedioic acid
ATH13n00012 LinkIcon PT202720 LinkIcon 0.997
L-Glutamic acid; MS2; Q-Tof; [M-H]-
   L-Glutamic acid
  Glu
  L-Glutamate
  alpha-Glutamic acid
  L-alpha-Aminoglutaric Acid
  (S)-2-Aminopentanedioic acid
  L-1-Aminopropane-1,3-dicarboxylic Acid
  1-Aminopropane-1,3-dicarboxylic acid
  Aciglut
  Glusate
  Glutacid
  Glutaminol
  Glutaton
  (2S)-2-aminopentanedioic acid
ATH13n00432 LinkIcon PT202720 LinkIcon 0.997
L-Glutamic acid; MS2; Q-Tof; [M-H]-
   L-Glutamic acid
  Glu
  L-Glutamate
  alpha-Glutamic acid
  L-alpha-Aminoglutaric Acid
  (S)-2-Aminopentanedioic acid
  L-1-Aminopropane-1,3-dicarboxylic Acid
  1-Aminopropane-1,3-dicarboxylic acid
  Aciglut
  Glusate
  Glutacid
  Glutaminol
  Glutaton
  (2S)-2-aminopentanedioic acid
ATH63n00016 LinkIcon PT202720 LinkIcon 0.996
L-Glutamic acid; MS2; Q-Tof; [M-H]-
   L-Glutamic acid
  Glu
  L-Glutamate
  alpha-Glutamic acid
  L-alpha-Aminoglutaric Acid
  (S)-2-Aminopentanedioic acid
  L-1-Aminopropane-1,3-dicarboxylic Acid
  1-Aminopropane-1,3-dicarboxylic acid
  Aciglut
  Glusate
  Glutacid
  Glutaminol
  Glutaton
  (2S)-2-aminopentanedioic acid
ATH06n00004 LinkIcon PT202720 LinkIcon 0.994
L-Glutamic acid; MS2; Q-Tof; [M-H]-
   L-Glutamic acid
  Glu
  L-Glutamate
  alpha-Glutamic acid
  L-alpha-Aminoglutaric Acid
  (S)-2-Aminopentanedioic acid
  L-1-Aminopropane-1,3-dicarboxylic Acid
  1-Aminopropane-1,3-dicarboxylic acid
  Aciglut
  Glusate
  Glutacid
  Glutaminol
  Glutaton
  (2S)-2-aminopentanedioic acid
ATH13n00009 LinkIcon PT202720 LinkIcon 0.992
L-Glutamic acid; MS2; Q-Tof; [M-H]-
   L-Glutamic acid
  Glu
  L-Glutamate
  alpha-Glutamic acid
  L-alpha-Aminoglutaric Acid
  (S)-2-Aminopentanedioic acid
  L-1-Aminopropane-1,3-dicarboxylic Acid
  1-Aminopropane-1,3-dicarboxylic acid
  Aciglut
  Glusate
  Glutacid
  Glutaminol
  Glutaton
  (2S)-2-aminopentanedioic acid
ATH11n00084 LinkIcon PT202720 LinkIcon 0.977
L-Glutamic acid; MS2; Q-Tof; [M-H]-
   L-Glutamic acid
  Glu
  L-Glutamate
  alpha-Glutamic acid
  L-alpha-Aminoglutaric Acid
  (S)-2-Aminopentanedioic acid
  L-1-Aminopropane-1,3-dicarboxylic Acid
  1-Aminopropane-1,3-dicarboxylic acid
  Aciglut
  Glusate
  Glutacid
  Glutaminol
  Glutaton
  (2S)-2-aminopentanedioic acid
ATH13n00435 LinkIcon PT202720 LinkIcon 0.976
L-Glutamic acid; MS2; Q-Tof; [M-H]-
   L-Glutamic acid
  Glu
  L-Glutamate
  alpha-Glutamic acid
  L-alpha-Aminoglutaric Acid
  (S)-2-Aminopentanedioic acid
  L-1-Aminopropane-1,3-dicarboxylic Acid
  1-Aminopropane-1,3-dicarboxylic acid
  Aciglut
  Glusate
  Glutacid
  Glutaminol
  Glutaton
  (2S)-2-aminopentanedioic acid
ATH11n00325 LinkIcon PT202720 LinkIcon 0.971
L-Glutamic acid; MS2; Q-Tof; [M-H]-
   L-Glutamic acid
  Glu
  L-Glutamate
  alpha-Glutamic acid
  L-alpha-Aminoglutaric Acid
  (S)-2-Aminopentanedioic acid
  L-1-Aminopropane-1,3-dicarboxylic Acid
  1-Aminopropane-1,3-dicarboxylic acid
  Aciglut
  Glusate
  Glutacid
  Glutaminol
  Glutaton
  (2S)-2-aminopentanedioic acid
ATH63n00506 LinkIcon PT202720 LinkIcon 0.968
L-Glutamic acid; MS2; Q-Tof; [M-H]-
   L-Glutamic acid
  Glu
  L-Glutamate
  alpha-Glutamic acid
  L-alpha-Aminoglutaric Acid
  (S)-2-Aminopentanedioic acid
  L-1-Aminopropane-1,3-dicarboxylic Acid
  1-Aminopropane-1,3-dicarboxylic acid
  Aciglut
  Glusate
  Glutacid
  Glutaminol
  Glutaton
  (2S)-2-aminopentanedioic acid
ATH11n00325 LinkIcon PM001000 LinkIcon 0.936
g-Carboxyglutamic acid; MS2; QqQ; M-H; -10
   g-Carboxyglutamic acid
ATH13n00432 LinkIcon PM001000 LinkIcon 0.932
g-Carboxyglutamic acid; MS2; QqQ; M-H; -10
   g-Carboxyglutamic acid
ATH63n00016 LinkIcon PM001000 LinkIcon 0.931
g-Carboxyglutamic acid; MS2; QqQ; M-H; -10
   g-Carboxyglutamic acid
ATH06n00004 LinkIcon PM001000 LinkIcon 0.910
g-Carboxyglutamic acid; MS2; QqQ; M-H; -10
   g-Carboxyglutamic acid
ATH58n00551 LinkIcon PT202720 LinkIcon 0.908
L-Glutamic acid; MS2; Q-Tof; [M-H]-
   L-Glutamic acid
  Glu
  L-Glutamate
  alpha-Glutamic acid
  L-alpha-Aminoglutaric Acid
  (S)-2-Aminopentanedioic acid
  L-1-Aminopropane-1,3-dicarboxylic Acid
  1-Aminopropane-1,3-dicarboxylic acid
  Aciglut
  Glusate
  Glutacid
  Glutaminol
  Glutaton
  (2S)-2-aminopentanedioic acid
ATH11n00084 LinkIcon PM001000 LinkIcon 0.907
g-Carboxyglutamic acid; MS2; QqQ; M-H; -10
   g-Carboxyglutamic acid
ATH13n00009 LinkIcon PM000985 LinkIcon 0.906
L-Glutamic acid; MS2; QqQ; M-H; -14
   L-Glutamic acid
ATH13n00012 LinkIcon PM001000 LinkIcon 0.903
g-Carboxyglutamic acid; MS2; QqQ; M-H; -10
   g-Carboxyglutamic acid
ATH14n00011 LinkIcon - -
-
ATH14n00821 LinkIcon - -
-
ATH56n01247 LinkIcon - -
-
ATH62n00019 LinkIcon - -
-
ATH64n00504 LinkIcon - -
-
2 adn094043 LinkIcon Negative ATH56n17962 LinkIcon - -
-
ATH63n17998 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at2g03340
WRKY DNA-binding protein 3 Encodes WRKY DNA-binding protein 3 (WRKY3). WRKY DNA-binding protein 3 (WRKY3); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 4 (TAIR:AT1G13960.1); Has 6486 Blast hits to 3819 proteins in 292 species: Archae - 2; Bacteria - 20; Metazoa - 337; Fungi - 90; Plants - 5675; Viruses - 3; Other Eukaryotes - 359 (source: NCBI BLink).
2
at2g04890
SCARECROW-like 21 Encodes a scarecrow-like protein (SCL21). Member of GRAS gene family. SCARECROW-like 21 (SCL21); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G48150.2); Has 2478 Blast hits to 2441 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
3
at2g14060
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38020.1); Has 863 Blast hits to 850 proteins in 119 species: Archae - 0; Bacteria - 61; Metazoa - 5; Fungi - 5; Plants - 725; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
4
at2g32415
Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain - Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: shoot apex, cultured cell; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (TAIR:AT5G35910.1); Has 4081 Blast hits to 3969 proteins in 1270 species: Archae - 0; Bacteria - 2323; Metazoa - 435; Fungi - 138; Plants - 199; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink).
5
at3g01490
Protein kinase superfamily protein - Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G50000.1); Has 129107 Blast hits to 127633 proteins in 4815 species: Archae - 144; Bacteria - 13952; Metazoa - 48674; Fungi - 11933; Plants - 33456; Viruses - 637; Other Eukaryotes - 20311 (source: NCBI BLink).
6
at3g50060
myb domain protein 77 Encodes a member of the R2R3 transcription factor gene family. Expressed in response to potassium deprivation and auxin. Involved in lateral root development. Interacts with ARF7 and regulates the expression of some auxin responsive genes. myb domain protein 77 (MYB77); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein r1 (TAIR:AT5G67300.1); Has 8885 Blast hits to 7887 proteins in 483 species: Archae - 0; Bacteria - 2; Metazoa - 822; Fungi - 555; Plants - 5415; Viruses - 3; Other Eukaryotes - 2088 (source: NCBI BLink).
7
at5g15240
Transmembrane amino acid transporter family protein - Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G28960.1); Has 5045 Blast hits to 4985 proteins in 317 species: Archae - 15; Bacteria - 153; Metazoa - 1796; Fungi - 1055; Plants - 1275; Viruses - 9; Other Eukaryotes - 742 (source: NCBI BLink).
8
at5g18100
copper/zinc superoxide dismutase 3 A putative peroxisomal CuZnSOD inducible by a high-light pulse. copper/zinc superoxide dismutase 3 (CSD3); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to oxidative stress, oxygen and reactive oxygen species metabolic process, removal of superoxide radicals; LOCATED IN: peroxisome, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 1 (TAIR:AT1G08830.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit