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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 5 " Y:" 21 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adp011161 LinkIcon Positive ATH06p05259 LinkIcon - -
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ATH06p05790 LinkIcon - -
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ATH07p05082 LinkIcon - -
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ATH07p05605 LinkIcon - -
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ATH08p05324 LinkIcon - -
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ATH08p05874 LinkIcon - -
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ATH09p05290 LinkIcon - -
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ATH09p05796 LinkIcon - -
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ATH10p05018 LinkIcon - -
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ATH10p05531 LinkIcon - -
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ATH11p05254 LinkIcon - -
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ATH11p05840 LinkIcon - -
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ATH12p05069 LinkIcon - -
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ATH12p05608 LinkIcon - -
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ATH13p06096 LinkIcon - -
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ATH13p06754 LinkIcon - -
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ATH14p05901 LinkIcon - -
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ATH14p06467 LinkIcon - -
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ATH56p05170 LinkIcon - -
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ATH56p05746 LinkIcon - -
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ATH57p04964 LinkIcon - -
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ATH57p05433 LinkIcon - -
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ATH58p05834 LinkIcon - -
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ATH58p06582 LinkIcon - -
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ATH59p05125 LinkIcon - -
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ATH59p05642 LinkIcon - -
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ATH61p06752 LinkIcon - -
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ATH61p07676 LinkIcon - -
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ATH62p04955 LinkIcon - -
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ATH62p05441 LinkIcon - -
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ATH63p05244 LinkIcon - -
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ATH63p05870 LinkIcon - -
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ATH63p06412 LinkIcon - -
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ATH63p06681 LinkIcon - -
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ATH63p07204 LinkIcon - -
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ATH64p06600 LinkIcon - -
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ATH64p07115 LinkIcon - -
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2. Gene information

No. ID Short description Curator summary Computational description
1
at1g34340
alpha/beta-Hydrolases superfamily protein - alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G49950.1); Has 2391 Blast hits to 2388 proteins in 904 species: Archae - 0; Bacteria - 1410; Metazoa - 329; Fungi - 194; Plants - 136; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink).
2
at1g64970
gamma-tocopherol methyltransferase gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves gamma-tocopherol methyltransferase (G-TMT); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G73600.1); Has 14618 Blast hits to 14609 proteins in 2288 species: Archae - 408; Bacteria - 10917; Metazoa - 203; Fungi - 466; Plants - 497; Viruses - 0; Other Eukaryotes - 2127 (source: NCBI BLink).
3
at2g24220
purine permease 5 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 5 (PUP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 1 (TAIR:AT1G28230.1); Has 506 Blast hits to 495 proteins in 68 species: Archae - 4; Bacteria - 41; Metazoa - 16; Fungi - 40; Plants - 347; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
4
at4g18020
CheY-like two-component responsive regulator family protein Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9). APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
5
at4g39180
Sec14p-like phosphatidylinositol transfer family protein encodes a protein that complements the function of a sec14(ts) mutant of S. cerevisiae SECRETION 14 (SEC14); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: phosphatidylcholine biosynthetic process; LOCATED IN: intracellular; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14-like 3 (TAIR:AT2G21540.3); Has 2899 Blast hits to 2883 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 924; Fungi - 653; Plants - 892; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink).
6
at4g39210
Glucose-1-phosphate adenylyltransferase family protein Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots. APL3; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT2G21590.2); Has 8453 Blast hits to 8443 proteins in 1715 species: Archae - 406; Bacteria - 5407; Metazoa - 11; Fungi - 12; Plants - 1700; Viruses - 0; Other Eukaryotes - 917 (source: NCBI BLink).
7
at5g08170
porphyromonas-type peptidyl-arginine deiminase family protein - EMBRYO DEFECTIVE 1873 (EMB1873); CONTAINS InterPro DOMAIN/s: Agmatine deiminase (InterPro:IPR017754), Peptidyl-arginine deiminase, Porphyromonas-type (InterPro:IPR007466); Has 2547 Blast hits to 2545 proteins in 784 species: Archae - 10; Bacteria - 1723; Metazoa - 8; Fungi - 32; Plants - 53; Viruses - 9; Other Eukaryotes - 712 (source: NCBI BLink).
8
at5g17760
P-loop containing nucleoside triphosphate hydrolases superfamily protein - P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G17740.1); Has 22170 Blast hits to 20463 proteins in 2871 species: Archae - 1329; Bacteria - 7564; Metazoa - 3216; Fungi - 2801; Plants - 2591; Viruses - 35; Other Eukaryotes - 4634 (source: NCBI BLink).
9
at5g64560
magnesium transporter 9 Transmembrane magnesium transporter. One of 9 family members. magnesium transporter 9 (MGT9); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.2); Has 805 Blast hits to 789 proteins in 177 species: Archae - 2; Bacteria - 31; Metazoa - 60; Fungi - 200; Plants - 408; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit