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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AGI locus IDs

Choosing cell X:" 7 " Y:" 10 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adp000918 LinkIcon Positive ATH59p00292 LinkIcon PT110970 LinkIcon 0.981
DL-Pipecolinic acid; MS2; Q-Tof; [M+H]+
   DL-Pipecolinic acid
  HomoPro
  pipecolinic acid
  pipecolate
  Homoproline
  6-carboxypiperidine
  pipecolic acid
  2-piperidinecarboxylic acid
  piperidine-2-carboxylic acid
  Hexahydropicolinic acid
  dihydrobaikiane
  hexahydropicolinic acid
  (2S)-piperidine-2-carboxylic acid
PT102730 LinkIcon 0.974
L-Glutamine; MS2; Q-Tof; [M+H]+
   L-Glutamine
  Q
  Gln
  L-Glutamic acid 5-amide
  (S)-2,5-Diamino-5-oxopentanoic acid
  L-2-Aminoglutaramic acid
  Levoglutamide
  Cebrogen
  Glumin
  (2S)-2,5-diamino-5-oxopentanoic acid
  L-Lysine monohydrochloride
  Lys
  (S)-2,6-Diaminohexanoic acid monohydrochloride
  Lysine acid
  (2S)-2,6-diaminohexanoic acid
PT107190 LinkIcon 0.968
L-(+)-Lysine; MS2; Q-Tof; [M+H]+
   L-(+)-Lysine
  Lys
  Lysine acid
  2,6-diaminohexanoic acid
  (2S)-2,6-diaminohexanoic acid
PS109702 LinkIcon 0.967
DL-Pipecolinic acid; MS2; QqQ; positive; CE 20 V
   DL-Pipecolinic acid
  HomoPro
  pipecolinic acid
  pipecolate
  Homoproline
  6-carboxypiperidine
  pipecolic acid
  2-piperidinecarboxylic acid
  piperidine-2-carboxylic acid
  Hexahydropicolinic acid
  dihydrobaikiane
  hexahydropicolinic acid
PT102870 LinkIcon 0.965
L-Pyroglutamic acid; MS2; Q-Tof; [M+H]+
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
  (2S)-5-oxopyrrolidine-2-carboxylic acid
PM000932 LinkIcon 0.962
L-Lysine; MS2; QqQ; M+H; 22
   L-Lysine
ATH62p00293 LinkIcon PT102870 LinkIcon 0.958
L-Pyroglutamic acid; MS2; Q-Tof; [M+H]+
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
  (2S)-5-oxopyrrolidine-2-carboxylic acid
ATH59p00292 LinkIcon PS050203 LinkIcon 0.956
L-saccharopine; MS2; QqQ; positive; CE 30 V
   L-saccharopine
  epsilon-N-(L-glutar-2-yl)-L-lysine
  N6-(L-1,3-dicarboxylpropyl)-L-lysine
  N-Acetyl-DL-glutamic acid
  Ac-Glu
  N-Acetyl-DL-glutamate
  N-Acetylglutamate
  2-(Acetylamino)pentanedioic Acid
ATH62p00293 LinkIcon PT110970 LinkIcon 0.956
DL-Pipecolinic acid; MS2; Q-Tof; [M+H]+
   DL-Pipecolinic acid
  HomoPro
  pipecolinic acid
  pipecolate
  Homoproline
  6-carboxypiperidine
  pipecolic acid
  2-piperidinecarboxylic acid
  piperidine-2-carboxylic acid
  Hexahydropicolinic acid
  dihydrobaikiane
  hexahydropicolinic acid
  (2S)-piperidine-2-carboxylic acid
PT102810 LinkIcon 0.955
L-Lysine monohydrochloride; MS2; Q-Tof; [M+H]+
   L-Lysine monohydrochloride
  Lys
  (S)-2,6-Diaminohexanoic acid monohydrochloride
  Lysine acid
  (2S)-2,6-diaminohexanoic acid
PS109702 LinkIcon 0.953
DL-Pipecolinic acid; MS2; QqQ; positive; CE 20 V
   DL-Pipecolinic acid
  HomoPro
  pipecolinic acid
  pipecolate
  Homoproline
  6-carboxypiperidine
  pipecolic acid
  2-piperidinecarboxylic acid
  piperidine-2-carboxylic acid
  Hexahydropicolinic acid
  dihydrobaikiane
  hexahydropicolinic acid
PT107190 LinkIcon 0.949
L-(+)-Lysine; MS2; Q-Tof; [M+H]+
   L-(+)-Lysine
  Lys
  Lysine acid
  2,6-diaminohexanoic acid
  (2S)-2,6-diaminohexanoic acid
ATH59p00292 LinkIcon PS028102 LinkIcon 0.943
L-Lysine monohydrochloride; MS2; QqQ; positive; CE 20 V
   L-Lysine monohydrochloride
  Lys
  (S)-2,6-Diaminohexanoic acid monohydrochloride
  Lysine acid
ATH62p00293 LinkIcon PS071902 LinkIcon 0.941
L-(+)-Lysine; MS2; QqQ; positive; CE 20 V
   L-(+)-Lysine
  Lys
  Lysine acid
  2,6-diaminohexanoic acid
PS028102 LinkIcon 0.939
L-Lysine monohydrochloride; MS2; QqQ; positive; CE 20 V
   L-Lysine monohydrochloride
  Lys
  (S)-2,6-Diaminohexanoic acid monohydrochloride
  Lysine acid
PS050203 LinkIcon 0.936
L-saccharopine; MS2; QqQ; positive; CE 30 V
   L-saccharopine
  epsilon-N-(L-glutar-2-yl)-L-lysine
  N6-(L-1,3-dicarboxylpropyl)-L-lysine
PS104603 LinkIcon 0.933
N-Acetyl-DL-glutamic acid; MS2; QqQ; positive; CE 30 V
   N-Acetyl-DL-glutamic acid
  Ac-Glu
  N-Acetyl-DL-glutamate
  N-Acetylglutamate
  2-(Acetylamino)pentanedioic Acid
PT107480 LinkIcon 0.932
gamma-Glu-Cys; MS2; Q-Tof; [M+H]+
   gamma-Glu-Cys
  L-gamma-Glutamyl-L-cysteine
  Des-Gly-glutathione Reduced Form
  5-L-Glutamyl-L-cysteine
  L-gamma-Glutamylcysteine
  (2S)-2-amino-5-[[(2R)-1-hydroxy-1-oxo-3-sulfanylpropan-2-yl]amino]-5-oxopentanoic acid
ATH07p00553 LinkIcon - -
-
ATH09p00299 LinkIcon - -
-
ATH09p00555 LinkIcon - -
-
ATH10p00018 LinkIcon - -
-
ATH10p00292 LinkIcon - -
-
ATH11p00293 LinkIcon - -
-
ATH12p00550 LinkIcon - -
-
ATH13p00301 LinkIcon - -
-
ATH13p00561 LinkIcon - -
-
ATH57p00292 LinkIcon - -
-
ATH59p00565 LinkIcon - -
-
ATH63p00019 LinkIcon - -
-
ATH63p00296 LinkIcon - -
-
ATH63p00301 LinkIcon - -
-
ATH63p00564 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g07510
FTSH protease 10 encodes an FtsH protease that is localized to the mitochondrion FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink).
2
at1g08970
nuclear factor Y, subunit C9 heme activated protein (HAP5c) "nuclear factor Y, subunit C9" (NF-YC9); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C3 (TAIR:AT1G54830.3); Has 1343 Blast hits to 1343 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 451; Fungi - 349; Plants - 427; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink).
3
at1g16470
proteasome subunit PAB1 Encodes 20S proteasome subunit PAB1 (PAB1). proteasome subunit PAB1 (PAB1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT1G79210.3); Has 6828 Blast hits to 6827 proteins in 505 species: Archae - 887; Bacteria - 62; Metazoa - 2417; Fungi - 1560; Plants - 881; Viruses - 0; Other Eukaryotes - 1021 (source: NCBI BLink).
4
at1g29150
non-ATPase subunit 9 specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A. non-ATPase subunit 9 (ATS9); INVOLVED IN: response to cadmium ion, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: proteasome family protein (TAIR:AT2G26990.1); Has 870 Blast hits to 851 proteins in 238 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 224; Plants - 209; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink).
5
at1g51710
ubiquitin-specific protease 6 Ubiquitin-specific protease 6 (UBP6). Deubiquinating enzyme. Interacts with calmodulin. ubiquitin-specific protease 6 (UBP6); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Ubiquitin conserved site (InterPro:IPR019954), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 7 (TAIR:AT3G21280.1); Has 4793 Blast hits to 4476 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 2508; Fungi - 875; Plants - 657; Viruses - 2; Other Eukaryotes - 751 (source: NCBI BLink).
6
at1g65670
cytochrome P450, family 702, subfamily A, polypeptide 1 a member of the cytochrome P450 gene family. molecular function unknown. "cytochrome P450, family 702, subfamily A, polypeptide 1" (CYP702A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 702, subfamily A, polypeptide 2 (TAIR:AT4G15300.1); Has 23293 Blast hits to 23240 proteins in 1360 species: Archae - 56; Bacteria - 2869; Metazoa - 9625; Fungi - 3612; Plants - 6281; Viruses - 3; Other Eukaryotes - 847 (source: NCBI BLink).
7
at1g75510
Transcription initiation factor IIF, beta subunit - Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter; LOCATED IN: mitochondrion, transcription factor TFIIF complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196), Transcription initiation factor IIF, beta subunit, subgroup (InterPro:IPR016640); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT3G52270.1); Has 346 Blast hits to 346 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 128; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
8
at1g75950
S phase kinase-associated protein 1 SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif. S phase kinase-associated protein 1 (SKP1); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: negative regulation of DNA recombination, response to cadmium ion, mitosis, male meiosis, ubiquitin-dependent protein catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein (TAIR:AT5G42190.1); Has 1455 Blast hits to 1451 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 552; Fungi - 179; Plants - 538; Viruses - 11; Other Eukaryotes - 175 (source: NCBI BLink).
9
at2g22090
RNA-binding (RRM/RBD/RNP motifs) family protein encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. As with UBP1, transient overexpression of UBA1a in protoplasts increases the steady-state levels of reporter mRNAs in a promoter-dependent manner. Along with UBP1 and UBA2a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus. UBA1A; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT2G19380.1); Has 13884 Blast hits to 11620 proteins in 712 species: Archae - 0; Bacteria - 872; Metazoa - 7516; Fungi - 1398; Plants - 2946; Viruses - 0; Other Eukaryotes - 1152 (source: NCBI BLink).
10
at2g33700
Protein phosphatase 2C family protein - Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G51470.1); Has 6726 Blast hits to 6663 proteins in 500 species: Archae - 12; Bacteria - 399; Metazoa - 1621; Fungi - 698; Plants - 2664; Viruses - 7; Other Eukaryotes - 1325 (source: NCBI BLink).
11
at3g07020
UDP-Glycosyltransferase superfamily protein - UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2447 Blast hits to 2409 proteins in 631 species: Archae - 0; Bacteria - 1513; Metazoa - 298; Fungi - 386; Plants - 150; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink).
12
at3g19640
magnesium transporter 4 Transmembrane magnesium transporter. One of nine family members. magnesium transporter 4 (MGT4); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 2 (TAIR:AT1G16010.3); Has 942 Blast hits to 823 proteins in 177 species: Archae - 2; Bacteria - 38; Metazoa - 107; Fungi - 287; Plants - 404; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink).
13
at3g53930
Protein kinase superfamily protein - Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G37840.1); Has 133618 Blast hits to 130974 proteins in 4578 species: Archae - 156; Bacteria - 15164; Metazoa - 49715; Fungi - 13328; Plants - 32750; Viruses - 546; Other Eukaryotes - 21959 (source: NCBI BLink).
14
at4g11800
Calcineurin-like metallo-phosphoesterase superfamily protein - Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G23000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
15
at4g14430
indole-3-butyric acid response 10 Encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway. indole-3-butyric acid response 10 (IBR10); FUNCTIONS IN: catalytic activity, dodecenoyl-CoA delta-isomerase activity; INVOLVED IN: fatty acid catabolic process, root hair elongation, metabolic process, indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: 3-hydroxyacyl-CoA dehydratase 1 (TAIR:AT4G14440.1); Has 14072 Blast hits to 14069 proteins in 1567 species: Archae - 245; Bacteria - 9896; Metazoa - 835; Fungi - 284; Plants - 269; Viruses - 0; Other Eukaryotes - 2543 (source: NCBI BLink).
16
at4g16430
basic helix-loop-helix (bHLH) DNA-binding superfamily protein - basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ABA-inducible BHLH-type transcription factor (TAIR:AT2G46510.1); Has 2977 Blast hits to 2635 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 85; Fungi - 31; Plants - 2859; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
17
at4g36190
Serine carboxypeptidase S28 family protein - Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT4G36195.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
18
at4g36195
Serine carboxypeptidase S28 family protein - Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: stem, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT4G36190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
19
at5g09920
RNA polymerase II, Rpb4, core protein Non-catalytic subunit specific to DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB4) NRPB4; CONTAINS InterPro DOMAIN/s: HRDC-like (InterPro:IPR010997), RNA polymerase II, Rpb4 (InterPro:IPR005574), RNA polymerase II, Rpb4, core (InterPro:IPR006590); BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein (TAIR:AT4G15950.1); Has 441 Blast hits to 441 proteins in 181 species: Archae - 4; Bacteria - 0; Metazoa - 144; Fungi - 150; Plants - 95; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
20
at5g16840
binding partner of acd11 1 - binding partner of acd11 1 (BPA1); FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G17720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
21
at5g20620
ubiquitin 4 encodes a ubiquitin polyprotein. ubiquitin 4 (UBQ4); INVOLVED IN: protein modification process, protein ubiquitination involved in ubiquitin-dependent protein catabolic process, ubiquitin-dependent protein catabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: polyubiquitin 10 (TAIR:AT4G05320.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
22
at5g38830
Cysteinyl-tRNA synthetase, class Ia family protein - Cysteinyl-tRNA synthetase, class Ia family protein; FUNCTIONS IN: cysteine-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, cysteinyl-tRNA aminoacylation; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cysteinyl-tRNA synthetase, class Ia (InterPro:IPR002308), Cysteinyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015803), Cysteinyl-tRNA synthetase, class Ia, C-terminal (InterPro:IPR015804); BEST Arabidopsis thaliana protein match is: Cysteinyl-tRNA synthetase, class Ia family protein (TAIR:AT3G56300.1); Has 11267 Blast hits to 10945 proteins in 2873 species: Archae - 213; Bacteria - 6070; Metazoa - 419; Fungi - 280; Plants - 139; Viruses - 3; Other Eukaryotes - 4143 (source: NCBI BLink).
23
at5g40930
translocase of outer membrane 20-4 Form of TOM20, which is a component of the TOM complex involved in transport of nuclear-encoded mitochondrial proteins translocase of outer membrane 20-4 (TOM20-4); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: plasma membrane, mitochondrial outer membrane translocase complex, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Plant specific mitochondrial import receptor subunit TOM20 (InterPro:IPR010547); BEST Arabidopsis thaliana protein match is: translocase of outer membrane 20 kDa subunit 3 (TAIR:AT3G27080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
24
at5g58290
regulatory particle triple-A ATPase 3 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA, regulatory particle triple-A ATPase 3 (RPT3); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, cell wall, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A (TAIR:AT4G29040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit