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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AtMetExpress peak IDs
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ReSpect accessions

Choosing cell X:" 0 " Y:" 10 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn034727 LinkIcon Negative ATH06n04500 LinkIcon - -
-
ATH07n04679 LinkIcon - -
-
ATH07n04683 LinkIcon - -
-
ATH07n05287 LinkIcon - -
-
ATH08n07534 LinkIcon - -
-
ATH08n08007 LinkIcon - -
-
ATH08n08444 LinkIcon - -
-
ATH09n07391 LinkIcon - -
-
ATH09n07646 LinkIcon - -
-
ATH09n08502 LinkIcon - -
-
ATH10n04887 LinkIcon - -
-
ATH10n04891 LinkIcon - -
-
ATH10n05529 LinkIcon - -
-
ATH12n04373 LinkIcon - -
-
ATH13n06695 LinkIcon - -
-
ATH14n06309 LinkIcon - -
-
ATH14n06938 LinkIcon - -
-
ATH57n08636 LinkIcon - -
-
ATH59n08808 LinkIcon - -
-
ATH59n09553 LinkIcon - -
-
ATH61n07991 LinkIcon - -
-
ATH61n08473 LinkIcon - -
-
ATH62n07814 LinkIcon - -
-
ATH62n08790 LinkIcon - -
-
ATH63n08226 LinkIcon - -
-
ATH64n07929 LinkIcon - -
-
2 adp002750 LinkIcon Positive ATH11p01884 LinkIcon - -
-
ATH12p01862 LinkIcon - -
-
ATH14p01345 LinkIcon - -
-
ATH14p01881 LinkIcon - -
-
ATH14p01884 LinkIcon - -
-
ATH58p01917 LinkIcon - -
-
ATH61p03242 LinkIcon - -
-
ATH61p03245 LinkIcon - -
-
ATH64p01378 LinkIcon - -
-
ATH64p01914 LinkIcon - -
-
3 adp005874 LinkIcon Positive ATH06p03093 LinkIcon PM018116 LinkIcon 1.000
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH08p03746 LinkIcon PM018116 LinkIcon 0.999
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH08p03442 LinkIcon PM018116 LinkIcon 0.998
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH13p03890 LinkIcon PM018116 LinkIcon 0.998
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH13p03160 LinkIcon PT106810 LinkIcon 0.997
sn-Glycero-3-phosphocholine 1:1 cadmium chloride adduct ; MS2; Q-Tof; [M+H]+
   sn-Glycero-3-phosphocholine 1
  1 cadmium chloride adduct
  L-alpha-Glycerophosphorylcholine
  L-alpha-Glycerol Phosphorylcholine
  Choline Alphoscerate
  2-[[(2R)-2,3-dihydroxypropoxy]-hydroxyphosphoryl]oxyethyl-trimethylazanium
ATH11p03986 LinkIcon PM018116 LinkIcon 0.996
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH14p03675 LinkIcon PT106810 LinkIcon 0.996
sn-Glycero-3-phosphocholine 1:1 cadmium chloride adduct ; MS2; Q-Tof; [M+H]+
   sn-Glycero-3-phosphocholine 1
  1 cadmium chloride adduct
  L-alpha-Glycerophosphorylcholine
  L-alpha-Glycerol Phosphorylcholine
  Choline Alphoscerate
  2-[[(2R)-2,3-dihydroxypropoxy]-hydroxyphosphoryl]oxyethyl-trimethylazanium
ATH06p03983 LinkIcon PM018116 LinkIcon 0.995
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH11p03104 LinkIcon PM018116 LinkIcon 0.995
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH12p03062 LinkIcon PM018116 LinkIcon 0.995
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH56p03205 LinkIcon PT106810 LinkIcon 0.995
sn-Glycero-3-phosphocholine 1:1 cadmium chloride adduct ; MS2; Q-Tof; [M+H]+
   sn-Glycero-3-phosphocholine 1
  1 cadmium chloride adduct
  L-alpha-Glycerophosphorylcholine
  L-alpha-Glycerol Phosphorylcholine
  Choline Alphoscerate
  2-[[(2R)-2,3-dihydroxypropoxy]-hydroxyphosphoryl]oxyethyl-trimethylazanium
ATH58p03757 LinkIcon PM018116 LinkIcon 0.995
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH63p03485 LinkIcon PT106810 LinkIcon 0.995
sn-Glycero-3-phosphocholine 1:1 cadmium chloride adduct ; MS2; Q-Tof; [M+H]+
   sn-Glycero-3-phosphocholine 1
  1 cadmium chloride adduct
  L-alpha-Glycerophosphorylcholine
  L-alpha-Glycerol Phosphorylcholine
  Choline Alphoscerate
  2-[[(2R)-2,3-dihydroxypropoxy]-hydroxyphosphoryl]oxyethyl-trimethylazanium
ATH58p03909 LinkIcon PM018116 LinkIcon 0.994
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH63p04012 LinkIcon PT106810 LinkIcon 0.994
sn-Glycero-3-phosphocholine 1:1 cadmium chloride adduct ; MS2; Q-Tof; [M+H]+
   sn-Glycero-3-phosphocholine 1
  1 cadmium chloride adduct
  L-alpha-Glycerophosphorylcholine
  L-alpha-Glycerol Phosphorylcholine
  Choline Alphoscerate
  2-[[(2R)-2,3-dihydroxypropoxy]-hydroxyphosphoryl]oxyethyl-trimethylazanium
ATH07p03948 LinkIcon PS068102 LinkIcon 0.989
sn-Glycero-3-phosphocholine 1:1 cadmium chloride adduct ; MS2; QqQ; positive; CE 20 V
   sn-Glycero-3-phosphocholine 1
  1 cadmium chloride adduct
  L-alpha-Glycerophosphorylcholine
  L-alpha-Glycerol Phosphorylcholine
  Choline Alphoscerate
ATH62p04023 LinkIcon PM018116 LinkIcon 0.984
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH10p03028 LinkIcon PM018116 LinkIcon 0.982
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH12p03643 LinkIcon PM018116 LinkIcon 0.982
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH56p03787 LinkIcon PT106810 LinkIcon 0.982
sn-Glycero-3-phosphocholine 1:1 cadmium chloride adduct ; MS2; Q-Tof; [M+H]+
   sn-Glycero-3-phosphocholine 1
  1 cadmium chloride adduct
  L-alpha-Glycerophosphorylcholine
  L-alpha-Glycerol Phosphorylcholine
  Choline Alphoscerate
  2-[[(2R)-2,3-dihydroxypropoxy]-hydroxyphosphoryl]oxyethyl-trimethylazanium
ATH61p04799 LinkIcon PM018116 LinkIcon 0.976
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH62p03684 LinkIcon PM018116 LinkIcon 0.972
sn-Glycero-3-phosphocholine; MS2; Q-TOF; M+H; 15->55V
   sn-Glycero-3-phosphocholine
ATH13p03424 LinkIcon PT106810 LinkIcon 0.948
sn-Glycero-3-phosphocholine 1:1 cadmium chloride adduct ; MS2; Q-Tof; [M+H]+
   sn-Glycero-3-phosphocholine 1
  1 cadmium chloride adduct
  L-alpha-Glycerophosphorylcholine
  L-alpha-Glycerol Phosphorylcholine
  Choline Alphoscerate
  2-[[(2R)-2,3-dihydroxypropoxy]-hydroxyphosphoryl]oxyethyl-trimethylazanium
ATH07p03572 LinkIcon - -
-
ATH13p03894 LinkIcon - -
-
ATH63p03488 LinkIcon - -
-
ATH63p03732 LinkIcon - -
-
ATH63p03831 LinkIcon - -
-
ATH63p04531 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g18860
WRKY DNA-binding protein 61 member of WRKY Transcription Factor; Group II-b WRKY DNA-binding protein 61 (WRKY61); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 72 (TAIR:AT5G15130.1); Has 5252 Blast hits to 3559 proteins in 289 species: Archae - 0; Bacteria - 31; Metazoa - 146; Fungi - 97; Plants - 3463; Viruses - 1; Other Eukaryotes - 1514 (source: NCBI BLink).
2
at1g26390
FAD-binding Berberine family protein - FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G26420.1); Has 4431 Blast hits to 4295 proteins in 635 species: Archae - 59; Bacteria - 1880; Metazoa - 8; Fungi - 1648; Plants - 659; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink).
3
at1g51890
Leucine-rich repeat protein kinase family protein - Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51860.1); Has 132319 Blast hits to 120399 proteins in 4470 species: Archae - 103; Bacteria - 13631; Metazoa - 43547; Fungi - 9956; Plants - 47012; Viruses - 341; Other Eukaryotes - 17729 (source: NCBI BLink).
4
at1g56010
NAC domain containing protein 1 Encodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). NAC1 (NAC1) NAC domain containing protein 1 (NAC1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12977.1); Has 2736 Blast hits to 2731 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2736; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
5
at1g66690
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G66700.1); Has 825 Blast hits to 821 proteins in 111 species: Archae - 0; Bacteria - 42; Metazoa - 7; Fungi - 5; Plants - 704; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
6
at1g66700
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein A member of the Arabidopsis SABATH methyltransferase gene family. Encodes PXMT1, a methyltransferase that methylates 1,7-paraxanthine. PXMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G66690.1); Has 857 Blast hits to 852 proteins in 114 species: Archae - 0; Bacteria - 51; Metazoa - 9; Fungi - 5; Plants - 706; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink).
7
at2g15480
UDP-glucosyl transferase 73B5 - UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3); Has 6808 Blast hits to 6730 proteins in 439 species: Archae - 0; Bacteria - 297; Metazoa - 1215; Fungi - 23; Plants - 5119; Viruses - 118; Other Eukaryotes - 36 (source: NCBI BLink).
8
at2g25090
CBL-interacting protein kinase 16 Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.18), which has also been reported as a member of the CBL-interacting protein kinases (CIPK16). CBL-interacting protein kinase 16 (CIPK16); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: stem, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 5 (TAIR:AT5G10930.1); Has 131103 Blast hits to 128839 proteins in 4426 species: Archae - 199; Bacteria - 15263; Metazoa - 48327; Fungi - 13205; Plants - 31908; Viruses - 544; Other Eukaryotes - 21657 (source: NCBI BLink).
9
at2g28710
C2H2-type zinc finger family protein - C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G59820.1); Has 1339 Blast hits to 1281 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 497; Fungi - 0; Plants - 827; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
10
at2g43000
NAC domain containing protein 42 - NAC domain containing protein 42 (NAC042); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G12910.1); Has 2932 Blast hits to 2927 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2932; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
11
at3g04060
NAC domain containing protein 46 - NAC domain containing protein 46 (NAC046); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 87 (TAIR:AT5G18270.1); Has 3018 Blast hits to 3013 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3018; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
12
at3g05690
nuclear factor Y, subunit A2 Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. "nuclear factor Y, subunit A2" (NF-YA2); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A10 (TAIR:AT5G06510.2); Has 655 Blast hits to 655 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 132; Plants - 359; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
13
at3g26210
cytochrome P450, family 71, subfamily B, polypeptide 23 putative cytochrome P450 "cytochrome P450, family 71, subfamily B, polypeptide 23" (CYP71B23); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71 subfamily B, polypeptide 7 (TAIR:AT1G13110.1); Has 33413 Blast hits to 33146 proteins in 1707 species: Archae - 46; Bacteria - 3254; Metazoa - 12207; Fungi - 7086; Plants - 9648; Viruses - 3; Other Eukaryotes - 1169 (source: NCBI BLink).
14
at3g29035
NAC domain containing protein 3 Encodes a protein with transcription factor activity. Note: this protein (AT3G29035) on occasion has also been referred to as AtNAC3, not to be confused with the AtNAC3 found at locus AT3G15500. NAC domain containing protein 3 (NAC3); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 6 (TAIR:AT5G39610.1); Has 2988 Blast hits to 2981 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2988; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
15
at3g47420
phosphate starvation-induced gene 3 Encodes a Pi starvation-responsive protein AtPS3. phosphate starvation-induced gene 3 (PS3); FUNCTIONS IN: sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, transmembrane transport; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G30560.1); Has 26325 Blast hits to 26083 proteins in 2250 species: Archae - 498; Bacteria - 20836; Metazoa - 940; Fungi - 2597; Plants - 303; Viruses - 0; Other Eukaryotes - 1151 (source: NCBI BLink).
16
at3g47780
ABC2 homolog 6 member of ATH subfamily ABC2 homolog 6 (ATH6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 392088 Blast hits to 359274 proteins in 4025 species: Archae - 7301; Bacteria - 309060; Metazoa - 8340; Fungi - 5303; Plants - 5008; Viruses - 16; Other Eukaryotes - 57060 (source: NCBI BLink).
17
at3g53150
UDP-glucosyl transferase 73D1 - UDP-glucosyl transferase 73D1 (UGT73D1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sepal, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: don-glucosyltransferase 1 (TAIR:AT2G36800.1); Has 7415 Blast hits to 7339 proteins in 377 species: Archae - 0; Bacteria - 180; Metazoa - 2057; Fungi - 21; Plants - 5064; Viruses - 36; Other Eukaryotes - 57 (source: NCBI BLink).
18
at3g59700
lectin-receptor kinase member of Receptor kinase-like protein family lectin-receptor kinase (HLECRK); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G59740.1); Has 126414 Blast hits to 124878 proteins in 4927 species: Archae - 148; Bacteria - 14786; Metazoa - 45832; Fungi - 11120; Plants - 35211; Viruses - 459; Other Eukaryotes - 18858 (source: NCBI BLink).
19
at3g60140
Glycosyl hydrolase superfamily protein Encodes a protein similar to beta-glucosidase and is a member of glycoside hydrolase family 1. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. DARK INDUCIBLE 2 (DIN2); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: aging, response to light stimulus, response to sucrose stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 28 (TAIR:AT2G44460.1); Has 11303 Blast hits to 10947 proteins in 1460 species: Archae - 142; Bacteria - 7771; Metazoa - 714; Fungi - 199; Plants - 1462; Viruses - 0; Other Eukaryotes - 1015 (source: NCBI BLink).
20
at3g63010
alpha/beta-Hydrolases superfamily protein Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4. GA INSENSITIVE DWARF1B (GID1B); FUNCTIONS IN: hydrolase activity; INVOLVED IN: floral organ morphogenesis, raffinose family oligosaccharide biosynthetic process, positive regulation of gibberellic acid mediated signaling pathway, response to gibberellin stimulus, gibberellin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G27320.1); Has 9567 Blast hits to 9549 proteins in 1556 species: Archae - 107; Bacteria - 5744; Metazoa - 546; Fungi - 719; Plants - 1351; Viruses - 5; Other Eukaryotes - 1095 (source: NCBI BLink).
21
at4g20110
VACUOLAR SORTING RECEPTOR 7 - VACUOLAR SORTING RECEPTOR 7 (VSR7); FUNCTIONS IN: calcium ion binding; INVOLVED IN: intracellular protein transport, N-terminal protein myristoylation, protein targeting to vacuole; LOCATED IN: trans-Golgi network, integral to plasma membrane, Golgi transport complex, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), Growth factor, receptor (InterPro:IPR009030); BEST Arabidopsis thaliana protein match is: VACUOLAR SORTING RECEPTOR 6 (TAIR:AT1G30900.1); Has 14212 Blast hits to 6790 proteins in 278 species: Archae - 2; Bacteria - 151; Metazoa - 12853; Fungi - 13; Plants - 489; Viruses - 0; Other Eukaryotes - 704 (source: NCBI BLink).
22
at4g23450
RING/U-box superfamily protein - RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
23
at4g28350
Concanavalin A-like lectin protein kinase family protein - Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: stem, cotyledon, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G04960.1); Has 117572 Blast hits to 116208 proteins in 4641 species: Archae - 127; Bacteria - 13536; Metazoa - 42743; Fungi - 9918; Plants - 33874; Viruses - 420; Other Eukaryotes - 16954 (source: NCBI BLink).
24
at4g34000
abscisic acid responsive elements-binding factor 3 Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid. abscisic acid responsive elements-binding factor 3 (ABF3); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: ABRE binding factor 4 (TAIR:AT3G19290.1); Has 2159 Blast hits to 2007 proteins in 161 species: Archae - 0; Bacteria - 4; Metazoa - 512; Fungi - 34; Plants - 1491; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).
25
at4g36988
conserved peptide upstream open reading frame 49 Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF49 represents a conserved upstream opening reading frame relative to major ORF AT4G36990.1 conserved peptide upstream open reading frame 49 (CPuORF49); LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
26
at4g36990
heat shock factor 4 encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins. heat shock factor 4 (HSF4); FUNCTIONS IN: transcription repressor activity, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cyclopentenone, response to heat; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 2101 Blast hits to 2087 proteins in 226 species: Archae - 0; Bacteria - 2; Metazoa - 340; Fungi - 475; Plants - 774; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink).
27
at5g11920
6-&1-fructan exohydrolase Encodes a protein with fructan exohydrolase (FEH) activity acting on both inulin and levan-type fructans (1- and 6-FEH). The enzyme does not have invertase activity. 6-&1-fructan exohydrolase (cwINV6); FUNCTIONS IN: inulinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: beta-fructofuranosidase 5 (TAIR:AT1G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
28
at5g13080
WRKY DNA-binding protein 75 WRKY75 is one of several transcription factors induced during Pi deprivation. It is nuclear localized and regulated differentially during Pi starvation. RNAi mediated suppression of WRKY75 made the plants more susceptible to Pi stress as indicated by the higher accumulation of anthocyanin during Pi starvation. WRKY DNA-binding protein 75 (WRKY75); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 45 (TAIR:AT3G01970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
29
at5g25820
Exostosin family protein - Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: membrane; EXPRESSED IN: stem, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT4G32790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
30
at5g58940
calmodulin-binding receptor-like cytoplasmic kinase 1 Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA calmodulin-binding receptor-like cytoplasmic kinase 1 (CRCK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calmodulin-binding receptor-like cytoplasmic kinase 2 (TAIR:AT4G00330.1); Has 122529 Blast hits to 121159 proteins in 4751 species: Archae - 123; Bacteria - 14655; Metazoa - 45015; Fungi - 10498; Plants - 33517; Viruses - 482; Other Eukaryotes - 18239 (source: NCBI BLink).
31
at5g59780
myb domain protein 59 Encodes a putative transcription factor (MYB59). myb domain protein 59 (MYB59); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 48 (TAIR:AT3G46130.3); Has 5767 Blast hits to 5764 proteins in 359 species: Archae - 0; Bacteria - 0; Metazoa - 308; Fungi - 94; Plants - 4827; Viruses - 3; Other Eukaryotes - 535 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit