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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 11 " Y:" 24 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn043278 LinkIcon Negative ATH62n10496 LinkIcon PM018008 LinkIcon 0.948
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH61n10185 LinkIcon PM018008 LinkIcon 0.947
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH61n09737 LinkIcon PM018008 LinkIcon 0.943
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH58n11489 LinkIcon PM018008 LinkIcon 0.940
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH61n10188 LinkIcon PM018008 LinkIcon 0.937
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH58n10724 LinkIcon PM018008 LinkIcon 0.935
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH58n11486 LinkIcon PM018008 LinkIcon 0.933
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH56n10837 LinkIcon PM018008 LinkIcon 0.931
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH62n09793 LinkIcon PM018008 LinkIcon 0.929
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH56n11337 LinkIcon PM018008 LinkIcon 0.927
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH61n09491 LinkIcon PM018008 LinkIcon 0.925
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH06n06005 LinkIcon PM018008 LinkIcon 0.924
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH11n05520 LinkIcon PM018008 LinkIcon 0.922
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH56n10581 LinkIcon PM018008 LinkIcon 0.917
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH08n09720 LinkIcon PM018008 LinkIcon 0.916
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH58n10727 LinkIcon PM018008 LinkIcon 0.916
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH57n11436 LinkIcon PM018008 LinkIcon 0.910
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH06n06343 LinkIcon PM018008 LinkIcon 0.907
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH06n06007 LinkIcon PM018008 LinkIcon 0.905
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH08n09143 LinkIcon PM018008 LinkIcon 0.903
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH07n06864 LinkIcon - -
-
ATH08n09140 LinkIcon - -
-
ATH08n09723 LinkIcon - -
-
ATH11n05341 LinkIcon - -
-
ATH11n05977 LinkIcon - -
-
ATH12n05121 LinkIcon - -
-
ATH12n05527 LinkIcon - -
-
ATH13n08819 LinkIcon - -
-
ATH56n11590 LinkIcon - -
-
ATH57n10733 LinkIcon - -
-
ATH62n09796 LinkIcon - -
-
ATH62n10979 LinkIcon - -
-
ATH63n11173 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at2g15740
C2H2-like zinc finger protein - C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: leaf; EXPRESSED DURING: LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G18490.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
2
at2g26870
non-specific phospholipase C2 - non-specific phospholipase C2 (NPC2); FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: triglyceride biosynthetic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2169 Blast hits to 2123 proteins in 400 species: Archae - 32; Bacteria - 1806; Metazoa - 0; Fungi - 127; Plants - 155; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
3
at2g38330
MATE efflux family protein - MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G38380.1); Has 17219 Blast hits to 17166 proteins in 2310 species: Archae - 394; Bacteria - 13798; Metazoa - 83; Fungi - 156; Plants - 607; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink).
4
at2g44230
Plant protein of unknown function (DUF946) - Plant protein of unknown function (DUF946); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT2G44260.1); Has 432 Blast hits to 414 proteins in 115 species: Archae - 0; Bacteria - 34; Metazoa - 43; Fungi - 133; Plants - 207; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
5
at3g17040
high chlorophyll fluorescent 107 It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis. high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast, plasma membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1); Has 8355 Blast hits to 4834 proteins in 935 species: Archae - 387; Bacteria - 2714; Metazoa - 1907; Fungi - 1281; Plants - 751; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink).
6
at4g15560
Deoxyxylulose-5-phosphate synthase Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis CLOROPLASTOS ALTERADOS 1 (CLA1); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase-like, C-terminal (InterPro:IPR015941), Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477), Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose 5-phosphate synthase 1 (TAIR:AT3G21500.2); Has 24450 Blast hits to 24392 proteins in 2940 species: Archae - 267; Bacteria - 15281; Metazoa - 526; Fungi - 278; Plants - 446; Viruses - 0; Other Eukaryotes - 7652 (source: NCBI BLink).
7
at4g25910
NFU domain protein 3 Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU1 and 2 than to NFU4 and 5. Targeted to the chloroplast. NFU domain protein 3 (NFU3); CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075); BEST Arabidopsis thaliana protein match is: NIFU-like protein 2 (TAIR:AT5G49940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

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