Home Gene search Metabolite search PRIMe
 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
 Highlight filters
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Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 12 " Y:" 0 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn025972 LinkIcon Negative ATH06n02590 LinkIcon - -
-
ATH06n03074 LinkIcon - -
-
ATH07n02973 LinkIcon - -
-
ATH08n04717 LinkIcon - -
-
ATH08n05361 LinkIcon - -
-
ATH10n02844 LinkIcon - -
-
ATH11n02124 LinkIcon - -
-
ATH12n02119 LinkIcon - -
-
ATH12n02275 LinkIcon - -
-
ATH56n05616 LinkIcon - -
-
ATH56n06365 LinkIcon - -
-
ATH57n05875 LinkIcon - -
-
ATH57n06635 LinkIcon - -
-
ATH58n05917 LinkIcon - -
-
ATH58n06177 LinkIcon - -
-
ATH59n05556 LinkIcon - -
-
ATH59n06552 LinkIcon - -
-
ATH60n05523 LinkIcon - -
-
ATH60n06017 LinkIcon - -
-
ATH61n05052 LinkIcon - -
-
ATH61n05416 LinkIcon - -
-
ATH61n05695 LinkIcon - -
-
ATH62n05466 LinkIcon - -
-
ATH62n05663 LinkIcon - -
-
2 adn025973 LinkIcon Negative ATH06n03074 LinkIcon - -
-
ATH08n04717 LinkIcon - -
-
ATH10n02844 LinkIcon - -
-
ATH11n02124 LinkIcon - -
-
ATH12n02275 LinkIcon - -
-
ATH57n05875 LinkIcon - -
-
ATH59n05556 LinkIcon - -
-
ATH60n05523 LinkIcon - -
-
ATH61n05416 LinkIcon - -
-
ATH62n05466 LinkIcon - -
-
3 adn036568 LinkIcon Negative ATH14n07156 LinkIcon - -
-
4 adp001929 LinkIcon Positive ATH64p00558 LinkIcon PS118903 LinkIcon 0.932
L-Citrulline; MS2; QqQ; positive; CE 30 V
   L-Citrulline
  Cit
  Orn(carbamoyl)
  N5-Carbamoyl-L-ornithine
  delta-Ureidonorvaline
  L-2-Amino-5-ureidovaleric acid
  (S)-2-Amino-5-ureidopentanoic acid
  Sitrulline
5 adp002622 LinkIcon Positive ATH56p02156 LinkIcon PT102650 LinkIcon 0.913
L-Arginine monohydrochloride; MS2; Q-Tof; [M+H]+
   L-Arginine monohydrochloride
  Arg
  2-Amino-5-guanidinovaleric Acid
  (S)-2-Amino-5-guanidinopentanoic Acid
  Argamine
  Argivene
  Detoxargin
  Levargin
  (2S)-2-amino-5-(diaminomethylideneamino)pentanoic acid
6 adp003622 LinkIcon Positive ATH12p02149 LinkIcon PS028601 LinkIcon 0.975
L-Proline; MS2; QqQ; positive; CE 10 V
   L-Proline
  Pro
  2-Pyrrolidinecarboxylic acid
  L-alpha-Pyrrolidinecarboxylic acid
  Pyrrolidine-2-carboxylic acid
  (S)-Pyrrolidine-2-carboxylic acid
ATH06p02425 LinkIcon - -
-
ATH07p02163 LinkIcon - -
-
ATH08p02948 LinkIcon - -
-
ATH09p01920 LinkIcon - -
-
ATH10p02667 LinkIcon - -
-
ATH57p02224 LinkIcon - -
-
ATH59p03026 LinkIcon - -
-
ATH62p02779 LinkIcon - -
-
ATH63p02213 LinkIcon - -
-
7 adp004364 LinkIcon Positive ATH07p03594 LinkIcon - -
-
ATH14p02977 LinkIcon - -
-
ATH14p03503 LinkIcon - -
-
ATH14p03506 LinkIcon - -
-
ATH57p03753 LinkIcon - -
-
ATH61p04874 LinkIcon - -
-
ATH63p03012 LinkIcon - -
-
ATH63p03548 LinkIcon - -
-
ATH64p03016 LinkIcon - -
-
ATH64p03809 LinkIcon - -
-
ATH64p03812 LinkIcon - -
-
8 adp008724 LinkIcon Positive ATH63p04597 LinkIcon PM018094 LinkIcon 0.953
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH12p04530 LinkIcon - -
-
ATH14p04867 LinkIcon - -
-
ATH14p05283 LinkIcon - -
-
ATH14p05699 LinkIcon - -
-
ATH61p06025 LinkIcon - -
-
ATH63p04816 LinkIcon - -
-
ATH63p05870 LinkIcon - -
-
ATH64p05307 LinkIcon - -
-
ATH64p05816 LinkIcon - -
-
ATH64p05820 LinkIcon - -
-
9 adp009682 LinkIcon Positive ATH58p05427 LinkIcon PT111790 LinkIcon 0.975
Sinapoyl malate; MS2; Q-Tof; [M+H]+
   Sinapoyl malate
  Sinapoyl-(S)-malate
  2-O-sinapoylmalate
  (2S)-2-[(E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoyl]oxybutanedioic acid
ATH08p05030 LinkIcon PS015602 LinkIcon 0.955
Sinapic acid; MS2; QqQ; positive; CE 20 V
   Sinapic acid
  SA
  Sin
  Sinapate
  Sinapinic acid
  3,5-dimethoxy-4-hydroxycinnamic acid
  4-Hydroxy-3,5-dimethoxy-cinnamic acid
ATH11p05722 LinkIcon PT111790 LinkIcon 0.953
Sinapoyl malate; MS2; Q-Tof; [M+H]+
   Sinapoyl malate
  Sinapoyl-(S)-malate
  2-O-sinapoylmalate
  (2S)-2-[(E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoyl]oxybutanedioic acid
ATH09p05315 LinkIcon PT112530 LinkIcon 0.938
Calciferol; MS2; Q-Tof; [M+H]+
   Calciferol
  Vitamin D2
  Ergocalciferol
  Viosterin
  Osteil
  Viosterol
  Ercalciol
  Irradiated ergosterol
  Condacaps
  Condocaps
  Condol
  Crtron
  Crystallina
  Daral
  (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol
  Davitin
  Deltalin
  Deratol
  Diactol
  Drisdol
  Ergorone
  Ertron
  Fortodyl
  Geltabs
  Hyperkil
  Irradiated ergosta-5,7,22-trien-3-beta-ol
  Metadee
ATH09p05316 LinkIcon PT112530 LinkIcon 0.928
Calciferol; MS2; Q-Tof; [M+H]+
   Calciferol
  Vitamin D2
  Ergocalciferol
  Viosterin
  Osteil
  Viosterol
  Ercalciol
  Irradiated ergosterol
  Condacaps
  Condocaps
  Condol
  Crtron
  Crystallina
  Daral
  (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol
  Davitin
  Deltalin
  Deratol
  Diactol
  Drisdol
  Ergorone
  Ertron
  Fortodyl
  Geltabs
  Hyperkil
  Irradiated ergosta-5,7,22-trien-3-beta-ol
  Metadee
ATH06p04700 LinkIcon - -
-
ATH06p05285 LinkIcon - -
-
ATH07p04564 LinkIcon - -
-
ATH08p05349 LinkIcon - -
-
ATH12p04574 LinkIcon - -
-
ATH12p04579 LinkIcon - -
-
ATH12p05371 LinkIcon - -
-
ATH56p04973 LinkIcon - -
-
ATH56p05197 LinkIcon - -
-
ATH57p04565 LinkIcon - -
-
ATH58p05855 LinkIcon - -
-
ATH59p04633 LinkIcon - -
-
ATH62p04976 LinkIcon - -
-
ATH63p04642 LinkIcon - -
-
10 adp009683 LinkIcon Positive ATH58p05427 LinkIcon PT111790 LinkIcon 0.975
Sinapoyl malate; MS2; Q-Tof; [M+H]+
   Sinapoyl malate
  Sinapoyl-(S)-malate
  2-O-sinapoylmalate
  (2S)-2-[(E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoyl]oxybutanedioic acid
ATH09p05315 LinkIcon PT112530 LinkIcon 0.938
Calciferol; MS2; Q-Tof; [M+H]+
   Calciferol
  Vitamin D2
  Ergocalciferol
  Viosterin
  Osteil
  Viosterol
  Ercalciol
  Irradiated ergosterol
  Condacaps
  Condocaps
  Condol
  Crtron
  Crystallina
  Daral
  (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol
  Davitin
  Deltalin
  Deratol
  Diactol
  Drisdol
  Ergorone
  Ertron
  Fortodyl
  Geltabs
  Hyperkil
  Irradiated ergosta-5,7,22-trien-3-beta-ol
  Metadee
ATH09p05316 LinkIcon PT112530 LinkIcon 0.928
Calciferol; MS2; Q-Tof; [M+H]+
   Calciferol
  Vitamin D2
  Ergocalciferol
  Viosterin
  Osteil
  Viosterol
  Ercalciol
  Irradiated ergosterol
  Condacaps
  Condocaps
  Condol
  Crtron
  Crystallina
  Daral
  (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol
  Davitin
  Deltalin
  Deratol
  Diactol
  Drisdol
  Ergorone
  Ertron
  Fortodyl
  Geltabs
  Hyperkil
  Irradiated ergosta-5,7,22-trien-3-beta-ol
  Metadee
ATH06p04700 LinkIcon - -
-
ATH06p05285 LinkIcon - -
-
ATH07p04564 LinkIcon - -
-
ATH08p05349 LinkIcon - -
-
ATH12p04579 LinkIcon - -
-
ATH12p05371 LinkIcon - -
-
ATH56p04973 LinkIcon - -
-
ATH56p05197 LinkIcon - -
-
ATH57p04565 LinkIcon - -
-
ATH58p05855 LinkIcon - -
-
ATH59p04633 LinkIcon - -
-
ATH62p04976 LinkIcon - -
-
ATH63p04642 LinkIcon - -
-
ATH63p04930 LinkIcon - -
-
11 adp016665 LinkIcon Positive ATH09p07645 LinkIcon PT112580 LinkIcon 0.905
delta-Tocotrienol; MS2; Q-Tof; [M+H]+
   delta-Tocotrienol
  8-Methyltocotrienol
  (R)-delta-Tocotrienol
  (2R)-2,8-dimethyl-2-[(3E,7E)-4,8,12-trimethyltrideca-3,7,11-trienyl]chroman-6-ol
ATH11p08121 LinkIcon - -
-
ATH14p08454 LinkIcon - -
-
ATH59p07846 LinkIcon - -
-
ATH62p06634 LinkIcon - -
-
12 adp020088 LinkIcon Positive ATH13p10411 LinkIcon PM018178 LinkIcon 0.966
Spermidine-disinapyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-disinapyl
ATH13p10815 LinkIcon PM018178 LinkIcon 0.951
Spermidine-disinapyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-disinapyl
ATH13p09802 LinkIcon PM018178 LinkIcon 0.942
Spermidine-disinapyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-disinapyl
ATH11p08741 LinkIcon PM018178 LinkIcon 0.940
Spermidine-disinapyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-disinapyl
ATH64p11494 LinkIcon PS003402 LinkIcon 0.928
Serotonin hydrochloride; MS2; QqQ; positive; CE 20 V
   Serotonin hydrochloride
  5-HT
  5-Hydoxytryptamine hydrochloride
  3-(2-Aminoethyl)-5-hydroxyindole hydrochloride
  Enteramine
ATH61p10384 LinkIcon PM018178 LinkIcon 0.909
Spermidine-disinapyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-disinapyl
ATH59p08824 LinkIcon PS003402 LinkIcon 0.906
Serotonin hydrochloride; MS2; QqQ; positive; CE 20 V
   Serotonin hydrochloride
  5-HT
  5-Hydoxytryptamine hydrochloride
  3-(2-Aminoethyl)-5-hydroxyindole hydrochloride
  Enteramine
ATH13p09805 LinkIcon - -
-
ATH14p09320 LinkIcon - -
-
ATH14p09796 LinkIcon - -
-
ATH57p08555 LinkIcon - -
-
ATH59p08612 LinkIcon - -
-
ATH61p11075 LinkIcon - -
-
ATH62p08382 LinkIcon - -
-
ATH63p11087 LinkIcon - -
-
ATH63p12088 LinkIcon - -
-
ATH64p10834 LinkIcon - -
-
13 adp020421 LinkIcon Positive ATH06p09082 LinkIcon PT104630 LinkIcon 0.989
Kaempferol-3-O-beta-D-glucoside-7-O-alpha-L-rhamnoside; MS2; Q-Tof; [M+H]+
   Kaempferol-3-O-beta-D-glucoside-7-O-alpha-L-rhamnoside
  Kaem-3-Glc-7-Rha
  Kaempferol-3-glucoside-7-rhamnoside
ATH08p09465 LinkIcon PM018144 LinkIcon 0.985
Kaempferol-3-arabinoside-7-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Kaempferol-3-arabinoside-7-rhamnoside
ATH58p10197 LinkIcon PM018144 LinkIcon 0.959
Kaempferol-3-arabinoside-7-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Kaempferol-3-arabinoside-7-rhamnoside
ATH58p10858 LinkIcon PM018144 LinkIcon 0.955
Kaempferol-3-arabinoside-7-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Kaempferol-3-arabinoside-7-rhamnoside
ATH56p09511 LinkIcon PM018144 LinkIcon 0.917
Kaempferol-3-arabinoside-7-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Kaempferol-3-arabinoside-7-rhamnoside
ATH06p08393 LinkIcon PM018152 LinkIcon 0.901
Kaempferol-hexoside; MS2; Q-TOF; M+H; 15->55V
   Kaempferol-hexoside
ATH08p08743 LinkIcon - -
-
ATH14p09451 LinkIcon - -
-
ATH14p09918 LinkIcon - -
-
ATH63p11592 LinkIcon - -
-
ATH64p11744 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at2g36690
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
2
at3g23550
MATE efflux family protein - MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G23560.1); Has 11241 Blast hits to 11165 proteins in 2062 species: Archae - 263; Bacteria - 7905; Metazoa - 148; Fungi - 330; Plants - 1322; Viruses - 0; Other Eukaryotes - 1273 (source: NCBI BLink).
3
at5g39580
Peroxidase superfamily protein - Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: defense response to fungus, N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 3879 Blast hits to 3855 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 13; Plants - 3857; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
4
at5g57220
cytochrome P450, family 81, subfamily F, polypeptide 2 member of CYP81F, involved in glucosinolate metabolism. Mutants had impaired resistance to fungi. "cytochrome P450, family 81, subfamily F, polypeptide 2" (CYP81F2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily F, polypeptide 3 (TAIR:AT4G37400.1); Has 35927 Blast hits to 35660 proteins in 1834 species: Archae - 77; Bacteria - 5490; Metazoa - 12066; Fungi - 7231; Plants - 9556; Viruses - 3; Other Eukaryotes - 1504 (source: NCBI BLink).
5
at5g61160
anthocyanin 5-aromatic acyltransferase 1 - anthocyanin 5-aromatic acyltransferase 1 (AACT1); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G29680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit