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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 12 " Y:" 17 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn040291 LinkIcon Negative ATH06n05277 LinkIcon PT203860 LinkIcon 0.991
beta-Nicotinamide adenine dinucleotide oxidized form; MS2; Q-Tof; [M-H]-
   beta-Nicotinamide adenine dinucleotide hydrate
  beta-NAD
  beta-DPN
  Diphosphopyridine nucleotide
  Coenzyme1
  Cozymase
  Nadide
  [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl [[(2R,3S,4R,5R)-5-(3-carbamoylpyridin-1-ium-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] hydrogen phosphate
ATH07n06402 LinkIcon PT203860 LinkIcon 0.987
beta-Nicotinamide adenine dinucleotide oxidized form; MS2; Q-Tof; [M-H]-
   beta-Nicotinamide adenine dinucleotide hydrate
  beta-NAD
  beta-DPN
  Diphosphopyridine nucleotide
  Coenzyme1
  Cozymase
  Nadide
  [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl [[(2R,3S,4R,5R)-5-(3-carbamoylpyridin-1-ium-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] hydrogen phosphate
ATH12n05245 LinkIcon PT203860 LinkIcon 0.975
beta-Nicotinamide adenine dinucleotide oxidized form; MS2; Q-Tof; [M-H]-
   beta-Nicotinamide adenine dinucleotide hydrate
  beta-NAD
  beta-DPN
  Diphosphopyridine nucleotide
  Coenzyme1
  Cozymase
  Nadide
  [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl [[(2R,3S,4R,5R)-5-(3-carbamoylpyridin-1-ium-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] hydrogen phosphate
ATH12n04460 LinkIcon PT203860 LinkIcon 0.955
beta-Nicotinamide adenine dinucleotide oxidized form; MS2; Q-Tof; [M-H]-
   beta-Nicotinamide adenine dinucleotide hydrate
  beta-NAD
  beta-DPN
  Diphosphopyridine nucleotide
  Coenzyme1
  Cozymase
  Nadide
  [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl [[(2R,3S,4R,5R)-5-(3-carbamoylpyridin-1-ium-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] hydrogen phosphate
ATH10n06109 LinkIcon PT203860 LinkIcon 0.954
beta-Nicotinamide adenine dinucleotide oxidized form; MS2; Q-Tof; [M-H]-
   beta-Nicotinamide adenine dinucleotide hydrate
  beta-NAD
  beta-DPN
  Diphosphopyridine nucleotide
  Coenzyme1
  Cozymase
  Nadide
  [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl [[(2R,3S,4R,5R)-5-(3-carbamoylpyridin-1-ium-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] hydrogen phosphate
ATH56n10335 LinkIcon PT203860 LinkIcon 0.949
beta-Nicotinamide adenine dinucleotide oxidized form; MS2; Q-Tof; [M-H]-
   beta-Nicotinamide adenine dinucleotide hydrate
  beta-NAD
  beta-DPN
  Diphosphopyridine nucleotide
  Coenzyme1
  Cozymase
  Nadide
  [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl [[(2R,3S,4R,5R)-5-(3-carbamoylpyridin-1-ium-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] hydrogen phosphate
ATH12n05122 LinkIcon PT203860 LinkIcon 0.941
beta-Nicotinamide adenine dinucleotide oxidized form; MS2; Q-Tof; [M-H]-
   beta-Nicotinamide adenine dinucleotide hydrate
  beta-NAD
  beta-DPN
  Diphosphopyridine nucleotide
  Coenzyme1
  Cozymase
  Nadide
  [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl [[(2R,3S,4R,5R)-5-(3-carbamoylpyridin-1-ium-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] hydrogen phosphate
ATH11n04830 LinkIcon PT203860 LinkIcon 0.920
beta-Nicotinamide adenine dinucleotide oxidized form; MS2; Q-Tof; [M-H]-
   beta-Nicotinamide adenine dinucleotide hydrate
  beta-NAD
  beta-DPN
  Diphosphopyridine nucleotide
  Coenzyme1
  Cozymase
  Nadide
  [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl [[(2R,3S,4R,5R)-5-(3-carbamoylpyridin-1-ium-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] hydrogen phosphate
ATH59n10694 LinkIcon PT203860 LinkIcon 0.919
beta-Nicotinamide adenine dinucleotide oxidized form; MS2; Q-Tof; [M-H]-
   beta-Nicotinamide adenine dinucleotide hydrate
  beta-NAD
  beta-DPN
  Diphosphopyridine nucleotide
  Coenzyme1
  Cozymase
  Nadide
  [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl [[(2R,3S,4R,5R)-5-(3-carbamoylpyridin-1-ium-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] hydrogen phosphate
ATH06n06006 LinkIcon - -
-
ATH07n06589 LinkIcon - -
-
ATH07n06863 LinkIcon - -
-
ATH08n08542 LinkIcon - -
-
ATH08n09572 LinkIcon - -
-
ATH10n06625 LinkIcon - -
-
ATH11n04827 LinkIcon - -
-
ATH11n05337 LinkIcon - -
-
ATH11n05340 LinkIcon - -
-
ATH13n08382 LinkIcon - -
-
ATH14n07495 LinkIcon - -
-
ATH14n08064 LinkIcon - -
-
ATH14n08296 LinkIcon - -
-
ATH56n09830 LinkIcon - -
-
ATH56n11088 LinkIcon - -
-
ATH57n10474 LinkIcon - -
-
ATH58n09969 LinkIcon - -
-
ATH59n10210 LinkIcon - -
-
ATH60n10293 LinkIcon - -
-
ATH63n09426 LinkIcon - -
-
ATH64n09570 LinkIcon - -
-
ATH64n09573 LinkIcon - -
-
ATH64n10214 LinkIcon - -
-
2 adn132142 LinkIcon Negative - - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g04240
AUX/IAA transcriptional regulator family protein SHY2/IAA3 regulates multiple auxin responses in roots. It is induced rapidly by IAA, and has been shown to be phosphorylated by oat phytochrome A in vitro. SHORT HYPOCOTYL 2 (SHY2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to brassinosteroid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT5G43700.1); Has 1823 Blast hits to 1821 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1822; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
2
at1g18400
BR enhanced expression 1 - BR enhanced expression 1 (BEE1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 3 (TAIR:AT1G73830.1); Has 2046 Blast hits to 2038 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 35; Plants - 1999; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
3
at1g24170
Nucleotide-diphospho-sugar transferases superfamily protein Encodes a protein with putative galacturonosyltransferase activity. LGT9; FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: glucosyl transferase family 8 (TAIR:AT1G70090.2); Has 2080 Blast hits to 2070 proteins in 453 species: Archae - 0; Bacteria - 1044; Metazoa - 227; Fungi - 4; Plants - 722; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
4
at3g14310
pectin methylesterase 3 encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism. pectin methylesterase 3 (PME3); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: response to nematode; LOCATED IN: cell wall, apoplast, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 2 (TAIR:AT1G53830.1); Has 3052 Blast hits to 2982 proteins in 347 species: Archae - 6; Bacteria - 639; Metazoa - 1; Fungi - 199; Plants - 2181; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
5
at5g40850
urophorphyrin methylase 1 Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine. urophorphyrin methylase 1 (UPM1); CONTAINS InterPro DOMAIN/s: Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uroporphyrin-III C-methyltransferase, plant (InterPro:IPR012383), Uroporphyrin-III C-methyltransferase, C-terminal (InterPro:IPR006366), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776), Uroporphiryn-III C-methyltransferase, conserved site (InterPro:IPR003043); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit