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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 14 " Y:" 0 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn001833 LinkIcon Negative ATH11n00103 LinkIcon PT210350 LinkIcon 0.967
3-Hydroxymandelic acid ; MS2; Q-Tof; [M-H]-
   3-Hydroxymandelic acid
  3-Hydroxymandelate
  m-Hydroxymandelic Acid
  3-Hydroxyphenylglycolic acid
  2-hydroxy-2-(3-hydroxyphenyl)acetic acid
ATH14n00069 LinkIcon PS103509 LinkIcon 0.928
3-Hydroxymandelic acid ; MS2; QqQ; negative; CE 30 V
   3-Hydroxymandelic acid
  3-Hydroxymandelate
  m-Hydroxymandelic Acid
  3-Hydroxyphenylglycolic acid
ATH07n00081 LinkIcon - -
-
ATH07n00086 LinkIcon - -
-
ATH56n00081 LinkIcon - -
-
ATH56n00390 LinkIcon - -
-
ATH57n00082 LinkIcon - -
-
ATH58n00080 LinkIcon - -
-
ATH58n00083 LinkIcon - -
-
ATH59n00388 LinkIcon - -
-
ATH61n00390 LinkIcon - -
-
ATH64n00082 LinkIcon - -
-
ATH64n00405 LinkIcon - -
-
2 adn026787 LinkIcon Negative ATH08n05193 LinkIcon - -
-
ATH08n05367 LinkIcon - -
-
ATH10n03513 LinkIcon - -
-
ATH13n04977 LinkIcon - -
-
ATH56n06368 LinkIcon - -
-
ATH59n05804 LinkIcon - -
-
ATH60n06509 LinkIcon - -
-
ATH61n05056 LinkIcon - -
-
ATH61n05417 LinkIcon - -
-
ATH62n05943 LinkIcon - -
-
3 adp003132 LinkIcon Positive ATH06p01840 LinkIcon - -
-
ATH06p01843 LinkIcon - -
-
ATH06p02630 LinkIcon - -
-
ATH07p02865 LinkIcon - -
-
ATH08p01837 LinkIcon - -
-
ATH08p02372 LinkIcon - -
-
ATH09p02652 LinkIcon - -
-
ATH10p01843 LinkIcon - -
-
ATH10p02831 LinkIcon - -
-
ATH11p02892 LinkIcon - -
-
ATH12p01566 LinkIcon - -
-
ATH12p02351 LinkIcon - -
-
ATH13p01580 LinkIcon - -
-
ATH13p02645 LinkIcon - -
-
ATH56p02157 LinkIcon - -
-
ATH56p02706 LinkIcon - -
-
ATH59p02968 LinkIcon - -
-
ATH61p04555 LinkIcon - -
-
ATH62p02975 LinkIcon - -
-
ATH63p02953 LinkIcon - -
-
ATH64p02151 LinkIcon - -
-
4 adp008725 LinkIcon Positive ATH14p04867 LinkIcon - -
-
ATH14p05283 LinkIcon - -
-
ATH14p05699 LinkIcon - -
-
ATH61p06025 LinkIcon - -
-
ATH64p05307 LinkIcon - -
-
ATH64p05820 LinkIcon - -
-
5 adp010270 LinkIcon Positive ATH14p05922 LinkIcon PS015103 LinkIcon 0.966
2'-Deoxyuridine-5'-monophosphate disodium salt; MS2; QqQ; positive; CE 30 V
   2'-Deoxyuridine-5'-monophosphate disodium salt
  dUMP
  2'-Deoxy-UMP
  2'-deoxyuridylic acid
ATH64p05599 LinkIcon PS035804 LinkIcon 0.961
Thymidine-5'-monophosphate; MS2; QqQ; positive; CE 40 V
   Thymidine-5'-monophosphate
  dTMP
  deoxy-TMP
  Deoxythymidine 5'-phosphate
  Deoxythymidylic acid
  Thymidylic acid
  Thymidylate
ATH64p06368 LinkIcon PS015103 LinkIcon 0.953
2'-Deoxyuridine-5'-monophosphate disodium salt; MS2; QqQ; positive; CE 30 V
   2'-Deoxyuridine-5'-monophosphate disodium salt
  dUMP
  2'-Deoxy-UMP
  2'-deoxyuridylic acid
ATH14p05320 LinkIcon PS035804 LinkIcon 0.927
Thymidine-5'-monophosphate; MS2; QqQ; positive; CE 40 V
   Thymidine-5'-monophosphate
  dTMP
  deoxy-TMP
  Deoxythymidine 5'-phosphate
  Deoxythymidylic acid
  Thymidylic acid
  Thymidylate
ATH63p04645 LinkIcon PS121201 LinkIcon 0.923
Delphinidin; MS2; QqQ; positive; CE 10 V
   Delphinidin
  Dp
  Delphinidine
  Delphinidol
  Delfinidol
  Ephdine
  3,3',4',5,5',7-Hexahydroxy-2-phenylbenzopyrylium
  3,3',4',5,5',7-Hexahydroxyflavylium
  3,5,7-trihydroxy-2-(3,4,5-trihydroxyphenyl)benzopyrylium
ATH08p05031 LinkIcon - -
-
ATH63p05269 LinkIcon - -
-
6 adp015092 LinkIcon Positive ATH11p07616 LinkIcon PS124101 LinkIcon 0.993
all-trans-Retinoic Acid; MS2; QqQ; positive; CE 10 V
   all-trans-Retinoic Acid
  ATRA
  beta-RA
  All-trans-Vitamin A acid
  all-trans-Retinoate
  Resinoid Acid
  Aberel
  Airol
  Aknoten
  Cordes vas
  Dermairol
  3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid
  Effederm
  Epi-aberel
  Eudyna
  Retin-A
  Tretinoin
  Tretin M
ATH08p07457 LinkIcon PS041003 LinkIcon 0.990
Rhamnetin; MS2; QqQ; positive; CE 30 V
   Rhamnetin
  Ramn
  3,3',4',5-tetrahydroxy-7-methoxyflavone
  beta-Rhamnocitrin
  7-Methoxyquercetin
  7-methylquercetin
  Quercetin 7-methyl ether
  4H-1-Benzopyran-4-one, 2-(3,4-dihydroxyphenyl)-3,5-dihydroxy-7-methoxy-
ATH11p07252 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g14540
Peroxidase superfamily protein - Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G14550.1); Has 4581 Blast hits to 4555 proteins in 302 species: Archae - 0; Bacteria - 6; Metazoa - 19; Fungi - 179; Plants - 4302; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
2
at1g15040
Class I glutamine amidotransferase-like superfamily protein - Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: glutamine metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Peptidase C26 (InterPro:IPR011697), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G66860.1); Has 3704 Blast hits to 3700 proteins in 1207 species: Archae - 28; Bacteria - 2948; Metazoa - 3; Fungi - 7; Plants - 53; Viruses - 0; Other Eukaryotes - 665 (source: NCBI BLink).
3
at1g21110
O-methyltransferase family protein - O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G21120.1); Has 3289 Blast hits to 3284 proteins in 565 species: Archae - 1; Bacteria - 890; Metazoa - 104; Fungi - 640; Plants - 1549; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
4
at1g21120
O-methyltransferase family protein - O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G21110.1); Has 3310 Blast hits to 3305 proteins in 577 species: Archae - 1; Bacteria - 921; Metazoa - 104; Fungi - 640; Plants - 1542; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
5
at1g30720
FAD-binding Berberine family protein - FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30730.1); Has 3969 Blast hits to 3939 proteins in 594 species: Archae - 30; Bacteria - 1573; Metazoa - 1; Fungi - 1535; Plants - 718; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).
6
at1g30730
FAD-binding Berberine family protein - FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30720.1); Has 4813 Blast hits to 4783 proteins in 792 species: Archae - 53; Bacteria - 2083; Metazoa - 8; Fungi - 1639; Plants - 818; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).
7
at1g51790
Leucine-rich repeat protein kinase family protein - Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
8
at1g51800
Leucine-rich repeat protein kinase family protein - Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51860.1); Has 161787 Blast hits to 121896 proteins in 4448 species: Archae - 101; Bacteria - 13971; Metazoa - 43453; Fungi - 9805; Plants - 75517; Viruses - 389; Other Eukaryotes - 18551 (source: NCBI BLink).
9
at1g61360
S-locus lectin protein kinase family protein - S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: S-domain-1 29 (TAIR:AT1G61380.1); Has 125873 Blast hits to 123905 proteins in 4616 species: Archae - 126; Bacteria - 14038; Metazoa - 46183; Fungi - 10884; Plants - 35675; Viruses - 485; Other Eukaryotes - 18482 (source: NCBI BLink).
10
at1g62300
WRKY family transcription factor Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress. WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).
11
at2g33710
Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G61890.1); Has 6058 Blast hits to 5797 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6019; Viruses - 6; Other Eukaryotes - 31 (source: NCBI BLink).
12
at4g20860
FAD-binding Berberine family protein - FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866 proteins in 819 species: Archae - 58; Bacteria - 2286; Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink).
13
at5g64120
Peroxidase superfamily protein encodes a cell wall bound peroxidase that is induced by hypo-osmolarity Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: defense response to fungus, N-terminal protein myristoylation, respiratory burst; LOCATED IN: apoplast, cell wall, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G39580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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