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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Keyword
Polarity
Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 17 " Y:" 21 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adp016746 LinkIcon Positive ATH08p08113 LinkIcon PM018121 LinkIcon 0.996
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH12p06929 LinkIcon PM018121 LinkIcon 0.996
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH11p07803 LinkIcon PM018121 LinkIcon 0.995
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH06p07314 LinkIcon PM018121 LinkIcon 0.994
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH12p07382 LinkIcon PM018121 LinkIcon 0.994
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH06p07827 LinkIcon PM018121 LinkIcon 0.993
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH08p07531 LinkIcon PM018121 LinkIcon 0.991
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH09p07585 LinkIcon PM018121 LinkIcon 0.988
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH11p07302 LinkIcon PM018121 LinkIcon 0.987
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH10p06733 LinkIcon PM018121 LinkIcon 0.980
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH06p07829 LinkIcon PM018121 LinkIcon 0.978
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH09p07100 LinkIcon PM018121 LinkIcon 0.969
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH10p07116 LinkIcon PM018121 LinkIcon 0.968
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH06p07317 LinkIcon PM018121 LinkIcon 0.961
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH08p07535 LinkIcon PM018121 LinkIcon 0.958
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH08p08116 LinkIcon PM018121 LinkIcon 0.937
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH12p06932 LinkIcon PM018121 LinkIcon 0.922
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH06p07833 LinkIcon - -
-
ATH11p07304 LinkIcon - -
-
ATH11p07806 LinkIcon - -
-
ATH56p07227 LinkIcon - -
-
ATH56p07230 LinkIcon - -
-
ATH56p07832 LinkIcon - -
-
ATH56p07834 LinkIcon - -
-
ATH58p08676 LinkIcon - -
-
ATH58p08679 LinkIcon - -
-
ATH58p09438 LinkIcon - -
-
ATH58p09442 LinkIcon - -
-
ATH61p08844 LinkIcon - -
-
ATH61p08847 LinkIcon - -
-
ATH61p09414 LinkIcon - -
-
ATH61p09417 LinkIcon - -
-
ATH62p06579 LinkIcon - -
-
ATH62p06581 LinkIcon - -
-
ATH62p07096 LinkIcon - -
-
ATH63p09521 LinkIcon - -
-
ATH63p10284 LinkIcon - -
-
2 adp034809 LinkIcon Positive ATH06p12085 LinkIcon - -
-
ATH08p12468 LinkIcon - -
-
ATH11p11344 LinkIcon - -
-
ATH13p14337 LinkIcon - -
-
ATH56p14469 LinkIcon - -
-
ATH58p15213 LinkIcon - -
-
ATH61p16269 LinkIcon - -
-
ATH62p13730 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at3g16380
poly(A) binding protein 6 polyadenylate-binding protein, putative / PABP, putative, similar to polyadenylate-binding protein (poly(A)-binding protein) from {Arabidopsis thaliana} SP:P42731, (Cucumis sativus) GI:7528270, {Homo sapiens} SP:Q13310, {Arabidopsis thaliana} SP:Q05196; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM). Member of the class III family of PABP proteins. poly(A) binding protein 6 (PAB6); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 47895 Blast hits to 20906 proteins in 826 species: Archae - 26; Bacteria - 3385; Metazoa - 25529; Fungi - 5704; Plants - 8252; Viruses - 0; Other Eukaryotes - 4999 (source: NCBI BLink).
2
at3g55190
alpha/beta-Hydrolases superfamily protein - alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: glycerol biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39420.1); Has 3264 Blast hits to 3262 proteins in 1077 species: Archae - 36; Bacteria - 2164; Metazoa - 108; Fungi - 125; Plants - 448; Viruses - 35; Other Eukaryotes - 348 (source: NCBI BLink).
3
at4g24810
Protein kinase superfamily protein similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G50330.1); Has 9358 Blast hits to 9339 proteins in 1786 species: Archae - 124; Bacteria - 4346; Metazoa - 407; Fungi - 488; Plants - 713; Viruses - 14; Other Eukaryotes - 3266 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit