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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 18 " Y:" 3 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn053713 LinkIcon Negative ATH06n08797 LinkIcon - -
-
ATH13n11336 LinkIcon - -
-
ATH61n12419 LinkIcon - -
-
ATH61n13660 LinkIcon - -
-
ATH64n12978 LinkIcon - -
-
2 adp003143 LinkIcon Positive ATH14p02697 LinkIcon - -
-
ATH64p02194 LinkIcon - -
-
ATH64p02994 LinkIcon - -
-
3 adp004486 LinkIcon Positive ATH13p02435 LinkIcon PT110880 LinkIcon 0.978
Sinapic acid; MS2; Q-Tof; [M+H]+
   Sinapic acid
  SA
  Sin
  Sinapate
  Sinapinic acid
  3,5-dimethoxy-4-hydroxycinnamic acid
  4-Hydroxy-3,5-dimethoxy-cinnamic acid
  (E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoic acid
ATH13p03714 LinkIcon PT110880 LinkIcon 0.977
Sinapic acid; MS2; Q-Tof; [M+H]+
   Sinapic acid
  SA
  Sin
  Sinapate
  Sinapinic acid
  3,5-dimethoxy-4-hydroxycinnamic acid
  4-Hydroxy-3,5-dimethoxy-cinnamic acid
  (E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoic acid
ATH63p03008 LinkIcon PT110880 LinkIcon 0.977
Sinapic acid; MS2; Q-Tof; [M+H]+
   Sinapic acid
  SA
  Sin
  Sinapate
  Sinapinic acid
  3,5-dimethoxy-4-hydroxycinnamic acid
  4-Hydroxy-3,5-dimethoxy-cinnamic acid
  (E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoic acid
ATH63p03283 LinkIcon PT110880 LinkIcon 0.974
Sinapic acid; MS2; Q-Tof; [M+H]+
   Sinapic acid
  SA
  Sin
  Sinapate
  Sinapinic acid
  3,5-dimethoxy-4-hydroxycinnamic acid
  4-Hydroxy-3,5-dimethoxy-cinnamic acid
  (E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoic acid
ATH13p03479 LinkIcon PT111790 LinkIcon 0.971
Sinapoyl malate; MS2; Q-Tof; [M+H]+
   Sinapoyl malate
  Sinapoyl-(S)-malate
  2-O-sinapoylmalate
  (2S)-2-[(E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoyl]oxybutanedioic acid
ATH13p02702 LinkIcon PT110880 LinkIcon 0.964
Sinapic acid; MS2; Q-Tof; [M+H]+
   Sinapic acid
  SA
  Sin
  Sinapate
  Sinapinic acid
  3,5-dimethoxy-4-hydroxycinnamic acid
  4-Hydroxy-3,5-dimethoxy-cinnamic acid
  (E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoic acid
ATH06p02928 LinkIcon - -
-
ATH06p03156 LinkIcon - -
-
ATH06p03621 LinkIcon - -
-
ATH07p02915 LinkIcon - -
-
ATH07p03161 LinkIcon - -
-
ATH07p03163 LinkIcon - -
-
ATH08p02695 LinkIcon - -
-
ATH08p03496 LinkIcon - -
-
ATH09p02435 LinkIcon - -
-
ATH09p02711 LinkIcon - -
-
ATH10p02874 LinkIcon - -
-
ATH10p03097 LinkIcon - -
-
ATH11p02701 LinkIcon - -
-
ATH12p02407 LinkIcon - -
-
ATH12p03448 LinkIcon - -
-
ATH14p02445 LinkIcon - -
-
ATH14p03235 LinkIcon - -
-
ATH14p03735 LinkIcon - -
-
ATH56p02761 LinkIcon - -
-
ATH56p03274 LinkIcon - -
-
ATH56p03593 LinkIcon - -
-
ATH57p02762 LinkIcon - -
-
ATH57p03018 LinkIcon - -
-
ATH57p03749 LinkIcon - -
-
ATH58p02747 LinkIcon - -
-
ATH58p03279 LinkIcon - -
-
ATH59p03264 LinkIcon - -
-
ATH59p03587 LinkIcon - -
-
ATH61p04358 LinkIcon - -
-
ATH61p05201 LinkIcon - -
-
ATH62p03260 LinkIcon - -
-
ATH62p03574 LinkIcon - -
-
ATH63p03273 LinkIcon - -
-
ATH64p02478 LinkIcon - -
-
ATH64p03007 LinkIcon - -
-
ATH64p03283 LinkIcon - -
-
4 adp005584 LinkIcon Positive ATH14p03220 LinkIcon PS037003 LinkIcon 0.907
Uridine-5'-diphospho-N-acetylglucosamine sodium salt ; MS2; QqQ; positive; CE 30 V
   Uridine-5'-diphospho-N-acetylglucosamine sodium salt
  UDPAG
  UDP-GlcNAc
  UDP-N-acetylglucosamine
ATH06p03715 LinkIcon - -
-
ATH08p03164 LinkIcon - -
-
ATH08p03795 LinkIcon - -
-
ATH09p03737 LinkIcon - -
-
ATH10p03078 LinkIcon - -
-
ATH10p03619 LinkIcon - -
-
ATH11p03475 LinkIcon - -
-
ATH11p03753 LinkIcon - -
-
ATH12p03689 LinkIcon - -
-
ATH14p03933 LinkIcon - -
-
ATH56p03833 LinkIcon - -
-
ATH57p04084 LinkIcon - -
-
ATH58p03957 LinkIcon - -
-
ATH59p03877 LinkIcon - -
-
ATH61p05421 LinkIcon - -
-
ATH63p03252 LinkIcon - -
-
ATH63p03878 LinkIcon - -
-
ATH64p03268 LinkIcon - -
-
ATH64p04310 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g01380
Homeodomain-like superfamily protein ETC1 is involved in trichome and root hair patterning in Arabidopsis. ENHANCER OF TRY AND CPC 1 (ETC1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: shoot apex, hypocotyl, root; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: CAPRICE-like MYB3 (TAIR:AT4G01060.1); Has 2220 Blast hits to 2220 proteins in 165 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2207; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
2
at1g13430
sulfotransferase 4C Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4C is expressed in the roots and transcript levels rise in response to cytokinin treatment. sulfotransferase 4C (ST4C); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 4A (TAIR:AT2G14920.1); Has 2670 Blast hits to 2627 proteins in 170 species: Archae - 0; Bacteria - 153; Metazoa - 1667; Fungi - 1; Plants - 539; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
3
at1g64160
Disease resistance-responsive (dirigent-like protein) family protein - Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: petal, hypocotyl, root; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G23690.1); Has 792 Blast hits to 791 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 792; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
4
at1g64910
UDP-Glycosyltransferase superfamily protein - UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G53990.1); Has 5612 Blast hits to 5577 proteins in 265 species: Archae - 0; Bacteria - 72; Metazoa - 916; Fungi - 16; Plants - 4581; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
5
at1g74490
Protein kinase superfamily protein - Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2B (TAIR:AT2G02800.2); Has 113194 Blast hits to 112071 proteins in 4148 species: Archae - 81; Bacteria - 12715; Metazoa - 42174; Fungi - 9166; Plants - 32331; Viruses - 354; Other Eukaryotes - 16373 (source: NCBI BLink).
6
at2g01150
RING-H2 finger protein 2B Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils. RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
7
at2g14920
sulfotransferase 4A Encodes a brassinosteroid sulfotransferase that may be involved in brassinosteroid inactivation. In vitro experiements show that this enzyme can act on a broad group of naturally occurring brassinosteroids, including the 24-epimers and (22R,23R)-28 homobrassinosteroids, that have an array of different side chains, though it shows a preference for (22R,23R)-28 homobrassinosteroids. ST4A is expressed in the roots and transcript levels fall in response to cytokinin treatment. sulfotransferase 4A (ST4A); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 4C (TAIR:AT1G13430.1); Has 2849 Blast hits to 2809 proteins in 191 species: Archae - 2; Bacteria - 227; Metazoa - 1691; Fungi - 1; Plants - 536; Viruses - 0; Other Eukaryotes - 392 (source: NCBI BLink).
8
at3g27070
translocase outer membrane 20-1 Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteins translocase outer membrane 20-1 (TOM20-1); CONTAINS InterPro DOMAIN/s: Plant specific mitochondrial import receptor subunit TOM20 (InterPro:IPR010547); BEST Arabidopsis thaliana protein match is: translocase of outer membrane 20 kDa subunit 3 (TAIR:AT3G27080.1); Has 97 Blast hits to 97 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
9
at5g01320
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein - Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT4G33070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
10
at5g01330
pyruvate decarboxylase-3 pyruvate decarboxylase pyruvate decarboxylase-3 (PDC3); FUNCTIONS IN: in 6 functions; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G01320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
11
at5g05890
UDP-Glycosyltransferase superfamily protein - UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G05880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
12
at5g59240
Ribosomal protein S8e family protein - Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink).
13
at5g66700
homeobox 53 Encodes a homeodomain protein. Member of HD-ZIP 1 family, most closely related to HB5. AtHB53 is auxin-inducible and its induction is inhibited by cytokinin, especially in roots therefore may be involved in root development. homeobox 53 (HB53); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent, root development; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 40 (TAIR:AT4G36740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit