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 BL-SOM result

Position of SOM areas by tissue specificity of gene expression and metabolite accumulation.	0	1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29
0	40	12	8	12	7	14	19	12	4	16	15	8	18	9	19	9	5	18	10	11	19	13	12	10	13	11	20	25	25	25
1	9	22	2	8	3	7	4	10	6	8	5	5	9	7	7	12	7	11	8	9	3	14	7	14	17	5	11	7	4	21
2	14	13	19	10	12	9	14	7	16	5	4	5	10	15	24	21	15	18	9	11	13	14	17	16	10	8	10	16	9	18
3	11	10	12	15	13	7	10	13	18	22	29	18	14	25	14	12	14	14	17	15	16	6	9	15	8	7	19	16	9	12
4	9	11	15	13	17	17	14	14	14	30	14	33	34	27	18	23	14	16	16	9	24	12	20	15	12	11	13	25	10	14
5	13	12	15	21	10	9	22	24	13	29	18	27	25	28	19	21	15	18	17	17	9	10	16	13	4	25	7	19	12	7
6	16	15	21	20	18	26	15	25	20	25	14	30	21	25	25	28	17	20	10	9	18	22	13	20	5	8	5	15	8	21
7	16	13	27	25	20	19	22	20	20	12	26	25	21	20	24	15	10	21	17	18	12	15	5	8	9	14	14	19	5	9
8	11	14	22	19	17	16	26	21	19	20	26	22	11	23	25	17	24	16	12	12	22	14	13	17	12	14	19	17	10	11
9	20	9	13	20	12	25	22	17	14	22	21	19	20	10	24	11	21	14	19	18	15	6	13	19	11	18	17	18	4	22
10	34	22	7	19	19	16	20	25	20	18	24	33	20	23	19	13	24	23	21	15	21	21	18	13	10	16	13	20	13	8
11	11	9	12	13	28	14	19	18	17	18	15	16	24	16	12	15	25	17	20	17	27	23	16	15	15	17	19	21	10	23
12	17	17	11	16	9	21	19	21	26	18	21	14	27	11	18	10	11	19	14	26	18	21	18	22	23	17	19	16	9	16
13	16	6	15	13	15	18	16	21	28	14	19	21	14	17	14	11	34	14	23	18	12	20	33	13	11	12	23	21	16	16
14	32	5	10	15	20	13	16	27	24	12	16	6	21	16	19	15	25	22	20	14	23	15	27	56	21	19	22	23	14	17
15	3	14	15	13	11	7	19	15	21	8	17	14	20	15	20	22	17	19	25	21	13	19	15	12	13	20	9	23	13	24
16	10	9	6	6	10	17	7	15	22	19	19	13	10	17	8	24	10	21	13	15	10	12	15	22	24	23	15	28	11	25
17	20	18	18	12	7	11	11	20	8	10	15	20	7	27	7	20	21	16	15	19	15	15	19	31	16	19	19	23	11	17
18	10	7	9	19	13	35	8	8	18	17	16	13	17	10	1	10	19	19	11	9	14	18	15	29	15	25	9	23	13	13
19	15	10	15	16	23	10	14	17	5	12	17	13	11	4	11	16	20	10	10	17	15	19	10	9	9	17	13	18	6	28
20	8	13	22	21	24	7	17	5	15	22	11	9	30	9	13	11	20	10	12	11	7	15	4	28	12	18	9	18	10	12
21	30	23	9	23	14	10	22	15	23	17	29	35	18	38	36	27	11	5	15	20	10	13	6	11	8	11	12	10	9	19
22	1	2	10	10	14	14	16	19	22	29	22	38	20	27	16	12	7	22	4	5	6	22	6	22	5	17	8	15	6	15
23	27	12	37	21	13	11	18	16	20	23	13	19	7	5	3	4	9	19	1	22	17	14	7	13	14	10	12	9	12	14
24	14	13	13	14	10	18	16	19	8	7	22	8	23	14	8	3	16	11	1	9	9	12	6	3	13	4	11	8	6	9
25	28	18	32	17	17	17	23	28	16	9	31	6	20	10	28	7	43	10	12	17	16	7	25	9	24	10	18	11	8	20

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• Gene information ▼

1. Metabolite information

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2. Gene information

No.	ID	Short description	Curator summary	Computational description
1	at1g06490 eFP TAIR	glucan synthase-like 7	encodes a gene similar to callose synthase	glucan synthase-like 7 (GSL07); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1279 Blast hits to 924 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 711; Plants - 489; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
2	at1g10200 eFP TAIR	GATA type zinc finger transcription factor family protein	-	WLIM1; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT2G39900.1); Has 4354 Blast hits to 2727 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 3462; Fungi - 43; Plants - 506; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink).
3	at1g33440 eFP TAIR	Major facilitator superfamily protein	-	Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G59740.1); Has 6684 Blast hits to 6582 proteins in 1312 species: Archae - 0; Bacteria - 3263; Metazoa - 486; Fungi - 360; Plants - 2166; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink).
4	at1g41830 eFP TAIR	SKU5-similar 6	-	SKU5-similar 6 (SKS6); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 5 (TAIR:AT1G76160.1); Has 4991 Blast hits to 4914 proteins in 848 species: Archae - 16; Bacteria - 1377; Metazoa - 295; Fungi - 1862; Plants - 1313; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).
5	at1g73250 eFP TAIR	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1	encodes a bifunctional 3, 5-epimerase-4-reductase in L-fucose synthesis and converts GDP-D-mannose to GDP-L-fucose in vitro along with MUR1 (GDP-D-mannose 4,6-dehydratase). It is expressed in all tissues examined, but most abundantly in roots and flowers.	"GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1" (GER1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G17890.1); Has 26333 Blast hits to 26329 proteins in 2769 species: Archae - 655; Bacteria - 15410; Metazoa - 462; Fungi - 218; Plants - 758; Viruses - 25; Other Eukaryotes - 8805 (source: NCBI BLink).
6	at2g34840 eFP TAIR	Coatomer epsilon subunit	-	Coatomer epsilon subunit; FUNCTIONS IN: protein transporter activity, structural molecule activity, binding; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: COPI vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Coatomer, epsilon subunit (InterPro:IPR006822); BEST Arabidopsis thaliana protein match is: Coatomer epsilon subunit (TAIR:AT1G30630.1); Has 446 Blast hits to 446 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 175; Fungi - 107; Plants - 92; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
7	at2g46505 eFP TAIR	succinate dehydrogenase subunit 4	Encodes succinate dehydrogenase ,a component of mitochondrial respiratory complex II. Nuclear encoded gene which is imported into the mitochondrion.	succinate dehydrogenase subunit 4 (SDH4); FUNCTIONS IN: succinate dehydrogenase (ubiquinone) activity; INVOLVED IN: tricarboxylic acid cycle; LOCATED IN: mitochondrial respiratory chain complex II, mitochondrion, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 61 Blast hits to 61 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
8	at2g47380 eFP TAIR	Cytochrome c oxidase subunit Vc family protein	-	Cytochrome c oxidase subunit Vc family protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase subunit Vc (InterPro:IPR008432); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase subunit Vc family protein (TAIR:AT5G61310.4); Has 93 Blast hits to 93 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
9	at3g03200 eFP TAIR	NAC domain containing protein 45	-	NAC domain containing protein 45 (NAC045); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, stamen; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
10	at3g07420 eFP TAIR	asparaginyl-tRNA synthetase 2	Encodes an asparaginyl-tRNA synthetase.	asparaginyl-tRNA synthetase 2 (NS2); CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT5G56680.1); Has 9059 Blast hits to 7126 proteins in 1951 species: Archae - 376; Bacteria - 6198; Metazoa - 478; Fungi - 585; Plants - 210; Viruses - 0; Other Eukaryotes - 1212 (source: NCBI BLink).
11	at3g54030 eFP TAIR	Protein kinase protein with tetratricopeptide repeat domain	-	Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G59010.1); Has 33259 Blast hits to 32742 proteins in 1298 species: Archae - 16; Bacteria - 2417; Metazoa - 7041; Fungi - 251; Plants - 21929; Viruses - 104; Other Eukaryotes - 1501 (source: NCBI BLink).
12	at5g16590 eFP TAIR	Leucine-rich repeat protein kinase family protein	-	Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to symbiotic fungus; LOCATED IN: plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G02880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
13	at5g20870 eFP TAIR	O-Glycosyl hydrolases family 17 protein	-	O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2792 Blast hits to 2718 proteins in 160 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 51; Plants - 2724; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
14	at5g47030 eFP TAIR	ATPase, F1 complex, delta/epsilon subunit	Encodes the mitochondrial ATP synthase subunit delta.	ATPase, F1 complex, delta/epsilon subunit; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, zinc ion binding; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, mitochondrial proton-transporting ATP synthase complex, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
15	at5g56720 eFP TAIR	Lactate/malate dehydrogenase family protein	-	Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G04410.1); Has 9504 Blast hits to 9504 proteins in 2703 species: Archae - 135; Bacteria - 5560; Metazoa - 1205; Fungi - 155; Plants - 523; Viruses - 0; Other Eukaryotes - 1926 (source: NCBI BLink).

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