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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 19 " Y:" 22 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn026540 LinkIcon Negative ATH06n02920 LinkIcon PT204110 LinkIcon 0.939
sinigrin ; MS2; Q-Tof; [M-H]-
   sinigrin
  SIG
  2-propenyl glucosinolate
  Sinigroside
  Myronate
  Allyl glucosinolate
  (2R,3R,4S,5R,6S)-3,4,5-trihydroxy-2-(hydroxymethyl)-6-(C-prop-2-enyl-N-sulfooxy-carbonimidoyl)sulfanyl-oxane
  1-(beta-D-glucopyranosylthio)but-3-enylideneaminooxysulphonate
  [1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanylbut-3-enylidenea
ATH56n06563 LinkIcon PT204110 LinkIcon 0.939
sinigrin ; MS2; Q-Tof; [M-H]-
   sinigrin
  SIG
  2-propenyl glucosinolate
  Sinigroside
  Myronate
  Allyl glucosinolate
  (2R,3R,4S,5R,6S)-3,4,5-trihydroxy-2-(hydroxymethyl)-6-(C-prop-2-enyl-N-sulfooxy-carbonimidoyl)sulfanyl-oxane
  1-(beta-D-glucopyranosylthio)but-3-enylideneaminooxysulphonate
  [1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanylbut-3-enylidenea
ATH58n05354 LinkIcon PT204110 LinkIcon 0.938
sinigrin ; MS2; Q-Tof; [M-H]-
   sinigrin
  SIG
  2-propenyl glucosinolate
  Sinigroside
  Myronate
  Allyl glucosinolate
  (2R,3R,4S,5R,6S)-3,4,5-trihydroxy-2-(hydroxymethyl)-6-(C-prop-2-enyl-N-sulfooxy-carbonimidoyl)sulfanyl-oxane
  1-(beta-D-glucopyranosylthio)but-3-enylideneaminooxysulphonate
  [1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanylbut-3-enylidenea
ATH06n02326 LinkIcon PT204110 LinkIcon 0.933
sinigrin ; MS2; Q-Tof; [M-H]-
   sinigrin
  SIG
  2-propenyl glucosinolate
  Sinigroside
  Myronate
  Allyl glucosinolate
  (2R,3R,4S,5R,6S)-3,4,5-trihydroxy-2-(hydroxymethyl)-6-(C-prop-2-enyl-N-sulfooxy-carbonimidoyl)sulfanyl-oxane
  1-(beta-D-glucopyranosylthio)but-3-enylideneaminooxysulphonate
  [1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanylbut-3-enylidenea
ATH58n06639 LinkIcon PT204110 LinkIcon 0.928
sinigrin ; MS2; Q-Tof; [M-H]-
   sinigrin
  SIG
  2-propenyl glucosinolate
  Sinigroside
  Myronate
  Allyl glucosinolate
  (2R,3R,4S,5R,6S)-3,4,5-trihydroxy-2-(hydroxymethyl)-6-(C-prop-2-enyl-N-sulfooxy-carbonimidoyl)sulfanyl-oxane
  1-(beta-D-glucopyranosylthio)but-3-enylideneaminooxysulphonate
  [1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanylbut-3-enylidenea
ATH56n05305 LinkIcon PT204110 LinkIcon 0.927
sinigrin ; MS2; Q-Tof; [M-H]-
   sinigrin
  SIG
  2-propenyl glucosinolate
  Sinigroside
  Myronate
  Allyl glucosinolate
  (2R,3R,4S,5R,6S)-3,4,5-trihydroxy-2-(hydroxymethyl)-6-(C-prop-2-enyl-N-sulfooxy-carbonimidoyl)sulfanyl-oxane
  1-(beta-D-glucopyranosylthio)but-3-enylideneaminooxysulphonate
  [1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanylbut-3-enylidenea
ATH11n02065 LinkIcon PT204110 LinkIcon 0.925
sinigrin ; MS2; Q-Tof; [M-H]-
   sinigrin
  SIG
  2-propenyl glucosinolate
  Sinigroside
  Myronate
  Allyl glucosinolate
  (2R,3R,4S,5R,6S)-3,4,5-trihydroxy-2-(hydroxymethyl)-6-(C-prop-2-enyl-N-sulfooxy-carbonimidoyl)sulfanyl-oxane
  1-(beta-D-glucopyranosylthio)but-3-enylideneaminooxysulphonate
  [1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanylbut-3-enylidenea
ATH06n02322 LinkIcon PT204110 LinkIcon 0.922
sinigrin ; MS2; Q-Tof; [M-H]-
   sinigrin
  SIG
  2-propenyl glucosinolate
  Sinigroside
  Myronate
  Allyl glucosinolate
  (2R,3R,4S,5R,6S)-3,4,5-trihydroxy-2-(hydroxymethyl)-6-(C-prop-2-enyl-N-sulfooxy-carbonimidoyl)sulfanyl-oxane
  1-(beta-D-glucopyranosylthio)but-3-enylideneaminooxysulphonate
  [1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanylbut-3-enylidenea
ATH08n04664 LinkIcon PT204110 LinkIcon 0.907
sinigrin ; MS2; Q-Tof; [M-H]-
   sinigrin
  SIG
  2-propenyl glucosinolate
  Sinigroside
  Myronate
  Allyl glucosinolate
  (2R,3R,4S,5R,6S)-3,4,5-trihydroxy-2-(hydroxymethyl)-6-(C-prop-2-enyl-N-sulfooxy-carbonimidoyl)sulfanyl-oxane
  1-(beta-D-glucopyranosylthio)but-3-enylideneaminooxysulphonate
  [1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanylbut-3-enylidenea
ATH08n05569 LinkIcon PT204110 LinkIcon 0.900
sinigrin ; MS2; Q-Tof; [M-H]-
   sinigrin
  SIG
  2-propenyl glucosinolate
  Sinigroside
  Myronate
  Allyl glucosinolate
  (2R,3R,4S,5R,6S)-3,4,5-trihydroxy-2-(hydroxymethyl)-6-(C-prop-2-enyl-N-sulfooxy-carbonimidoyl)sulfanyl-oxane
  1-(beta-D-glucopyranosylthio)but-3-enylideneaminooxysulphonate
  [1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanylbut-3-enylidenea
ATH06n02918 LinkIcon - -
-
ATH07n02971 LinkIcon - -
-
ATH07n03393 LinkIcon - -
-
ATH11n02634 LinkIcon - -
-
ATH12n02173 LinkIcon - -
-
ATH12n02540 LinkIcon - -
-
ATH56n05569 LinkIcon - -
-
ATH56n06318 LinkIcon - -
-
ATH57n05829 LinkIcon - -
-
ATH58n05616 LinkIcon - -
-
ATH58n06393 LinkIcon - -
-
ATH60n06234 LinkIcon - -
-
ATH61n05204 LinkIcon - -
-
ATH61n05851 LinkIcon - -
-
ATH62n05191 LinkIcon - -
-
ATH62n06122 LinkIcon - -
-
2 adn054392 LinkIcon Negative ATH06n07854 LinkIcon - -
-
ATH06n08493 LinkIcon - -
-
ATH10n09615 LinkIcon - -
-
ATH11n07288 LinkIcon - -
-
ATH11n07421 LinkIcon - -
-
ATH11n07754 LinkIcon - -
-
ATH12n06584 LinkIcon - -
-
ATH12n06854 LinkIcon - -
-
ATH58n14034 LinkIcon - -
-
ATH62n13097 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g01570
Protein of unknown function (DUF604) - FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: fringe-related protein (TAIR:AT4G00300.1); Has 558 Blast hits to 547 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 169; Plants - 281; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
2
at5g08260
serine carboxypeptidase-like 35 - serine carboxypeptidase-like 35 (scpl35); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 34 (TAIR:AT5G23210.1); Has 3632 Blast hits to 3579 proteins in 366 species: Archae - 0; Bacteria - 189; Metazoa - 629; Fungi - 858; Plants - 1539; Viruses - 0; Other Eukaryotes - 417 (source: NCBI BLink).
3
at5g18090
AP2/B3-like transcriptional factor family protein - AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: VERDANDI (TAIR:AT5G18000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit