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Position of SOM areas by tissue specificity of gene expression and metabolite accumulation.	0	1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29
0	40	12	8	12	7	14	19	12	4	16	15	8	18	9	19	9	5	18	10	11	19	13	12	10	13	11	20	25	25	25
1	9	22	2	8	3	7	4	10	6	8	5	5	9	7	7	12	7	11	8	9	3	14	7	14	17	5	11	7	4	21
2	14	13	19	10	12	9	14	7	16	5	4	5	10	15	24	21	15	18	9	11	13	14	17	16	10	8	10	16	9	18
3	11	10	12	15	13	7	10	13	18	22	29	18	14	25	14	12	14	14	17	15	16	6	9	15	8	7	19	16	9	12
4	9	11	15	13	17	17	14	14	14	30	14	33	34	27	18	23	14	16	16	9	24	12	20	15	12	11	13	25	10	14
5	13	12	15	21	10	9	22	24	13	29	18	27	25	28	19	21	15	18	17	17	9	10	16	13	4	25	7	19	12	7
6	16	15	21	20	18	26	15	25	20	25	14	30	21	25	25	28	17	20	10	9	18	22	13	20	5	8	5	15	8	21
7	16	13	27	25	20	19	22	20	20	12	26	25	21	20	24	15	10	21	17	18	12	15	5	8	9	14	14	19	5	9
8	11	14	22	19	17	16	26	21	19	20	26	22	11	23	25	17	24	16	12	12	22	14	13	17	12	14	19	17	10	11
9	20	9	13	20	12	25	22	17	14	22	21	19	20	10	24	11	21	14	19	18	15	6	13	19	11	18	17	18	4	22
10	34	22	7	19	19	16	20	25	20	18	24	33	20	23	19	13	24	23	21	15	21	21	18	13	10	16	13	20	13	8
11	11	9	12	13	28	14	19	18	17	18	15	16	24	16	12	15	25	17	20	17	27	23	16	15	15	17	19	21	10	23
12	17	17	11	16	9	21	19	21	26	18	21	14	27	11	18	10	11	19	14	26	18	21	18	22	23	17	19	16	9	16
13	16	6	15	13	15	18	16	21	28	14	19	21	14	17	14	11	34	14	23	18	12	20	33	13	11	12	23	21	16	16
14	32	5	10	15	20	13	16	27	24	12	16	6	21	16	19	15	25	22	20	14	23	15	27	56	21	19	22	23	14	17
15	3	14	15	13	11	7	19	15	21	8	17	14	20	15	20	22	17	19	25	21	13	19	15	12	13	20	9	23	13	24
16	10	9	6	6	10	17	7	15	22	19	19	13	10	17	8	24	10	21	13	15	10	12	15	22	24	23	15	28	11	25
17	20	18	18	12	7	11	11	20	8	10	15	20	7	27	7	20	21	16	15	19	15	15	19	31	16	19	19	23	11	17
18	10	7	9	19	13	35	8	8	18	17	16	13	17	10	1	10	19	19	11	9	14	18	15	29	15	25	9	23	13	13
19	15	10	15	16	23	10	14	17	5	12	17	13	11	4	11	16	20	10	10	17	15	19	10	9	9	17	13	18	6	28
20	8	13	22	21	24	7	17	5	15	22	11	9	30	9	13	11	20	10	12	11	7	15	4	28	12	18	9	18	10	12
21	30	23	9	23	14	10	22	15	23	17	29	35	18	38	36	27	11	5	15	20	10	13	6	11	8	11	12	10	9	19
22	1	2	10	10	14	14	16	19	22	29	22	38	20	27	16	12	7	22	4	5	6	22	6	22	5	17	8	15	6	15
23	27	12	37	21	13	11	18	16	20	23	13	19	7	5	3	4	9	19	1	22	17	14	7	13	14	10	12	9	12	14
24	14	13	13	14	10	18	16	19	8	7	22	8	23	14	8	3	16	11	1	9	9	12	6	3	13	4	11	8	6	9
25	28	18	32	17	17	17	23	28	16	9	31	6	20	10	28	7	43	10	12	17	16	7	25	9	24	10	18	11	8	20

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• Gene information ▼

1. Metabolite information

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2. Gene information

No.	ID	Short description	Curator summary	Computational description
1	at1g09840 eFP TAIR	shaggy-like protein kinase 41	-	shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink).
2	at1g09850 eFP TAIR	xylem bark cysteine peptidase 3	Arabidopsis thaliana papain-like cysteine peptidase	xylem bark cysteine peptidase 3 (XBCP3); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8836 Blast hits to 8016 proteins in 749 species: Archae - 59; Bacteria - 272; Metazoa - 4224; Fungi - 4; Plants - 1933; Viruses - 132; Other Eukaryotes - 2212 (source: NCBI BLink).
3	at1g22540 eFP TAIR	Major facilitator superfamily protein	-	Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72140.1); Has 7676 Blast hits to 7510 proteins in 1439 species: Archae - 0; Bacteria - 3907; Metazoa - 586; Fungi - 484; Plants - 2183; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink).
4	at1g35720 eFP TAIR	annexin 1	Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, β-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion.	annexin 1 (ANNAT1); FUNCTIONS IN: in 7 functions; INVOLVED IN: in 8 processes; LOCATED IN: in 10 components; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 2 (TAIR:AT5G65020.1); Has 3809 Blast hits to 2217 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 2893; Fungi - 160; Plants - 482; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink).
5	at1g52420 eFP TAIR	UDP-Glycosyltransferase superfamily protein	-	UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G15940.2); Has 7088 Blast hits to 7079 proteins in 1470 species: Archae - 243; Bacteria - 4881; Metazoa - 13; Fungi - 38; Plants - 140; Viruses - 0; Other Eukaryotes - 1773 (source: NCBI BLink).
6	at1g53660 eFP TAIR	nodulin MtN21 /EamA-like transporter family protein	-	nodulin MtN21 /EamA-like transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT3G14410.1); Has 2431 Blast hits to 2424 proteins in 266 species: Archae - 2; Bacteria - 61; Metazoa - 541; Fungi - 378; Plants - 1216; Viruses - 0; Other Eukaryotes - 233 (source: NCBI BLink).
7	at2g16060 eFP TAIR	hemoglobin 1	Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen.	hemoglobin 1 (HB1); FUNCTIONS IN: oxygen binding; INVOLVED IN: response to hypoxia; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leghaemoglobin (InterPro:IPR001032), Globin-like (InterPro:IPR009050), Leghaemoglobin, iron-binding site (InterPro:IPR019824), Globin, subset (InterPro:IPR000971), Globin (InterPro:IPR012292); BEST Arabidopsis thaliana protein match is: haemoglobin 2 (TAIR:AT3G10520.1); Has 783 Blast hits to 745 proteins in 194 species: Archae - 0; Bacteria - 173; Metazoa - 274; Fungi - 3; Plants - 318; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
8	at2g18480 eFP TAIR	Major facilitator superfamily protein	-	Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G36670.1); Has 43653 Blast hits to 42994 proteins in 2645 species: Archae - 798; Bacteria - 24125; Metazoa - 5482; Fungi - 8533; Plants - 2750; Viruses - 2; Other Eukaryotes - 1963 (source: NCBI BLink).
9	at3g02880 eFP TAIR	Leucine-rich repeat protein kinase family protein	-	Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: anchored to plasma membrane, cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G16590.1); Has 140419 Blast hits to 103539 proteins in 3753 species: Archae - 105; Bacteria - 10616; Metazoa - 37369; Fungi - 7261; Plants - 69256; Viruses - 279; Other Eukaryotes - 15533 (source: NCBI BLink).
10	at3g11320 eFP TAIR	Nucleotide-sugar transporter family protein	-	Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G05820.1); Has 3089 Blast hits to 3084 proteins in 315 species: Archae - 10; Bacteria - 135; Metazoa - 742; Fungi - 470; Plants - 1357; Viruses - 0; Other Eukaryotes - 375 (source: NCBI BLink).
11	at3g14350 eFP TAIR	STRUBBELIG-receptor family 7	-	STRUBBELIG-receptor family 7 (SRF7); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 6 (TAIR:AT1G53730.1); Has 150168 Blast hits to 118851 proteins in 3450 species: Archae - 125; Bacteria - 15425; Metazoa - 44445; Fungi - 8889; Plants - 63588; Viruses - 356; Other Eukaryotes - 17340 (source: NCBI BLink).
12	at3g19400 eFP TAIR	Cysteine proteinases superfamily protein	-	Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT3G19390.1); Has 7864 Blast hits to 7783 proteins in 727 species: Archae - 61; Bacteria - 248; Metazoa - 3298; Fungi - 4; Plants - 1899; Viruses - 134; Other Eukaryotes - 2220 (source: NCBI BLink).
13	at4g12440 eFP TAIR	adenine phosphoribosyl transferase 4	-	adenine phosphoribosyl transferase 4 (APT4); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: nucleoside metabolic process, adenine salvage; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 3 (TAIR:AT4G22570.1); Has 7821 Blast hits to 7821 proteins in 2409 species: Archae - 188; Bacteria - 5134; Metazoa - 169; Fungi - 179; Plants - 165; Viruses - 0; Other Eukaryotes - 1986 (source: NCBI BLink).
14	at4g25570 eFP TAIR	Cytochrome b561/ferric reductase transmembrane protein family	Encodes cytochrome b561.	ACYB-2; FUNCTIONS IN: carbon-monoxide oxygenase activity; LOCATED IN: integral to membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: cytochrome B561-1 (TAIR:AT5G38630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
15	at4g35970 eFP TAIR	ascorbate peroxidase 5	Encodes a microsomal ascorbate peroxidase APX5. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.	ascorbate peroxidase 5 (APX5); FUNCTIONS IN: L-ascorbate peroxidase activity, peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 3 (TAIR:AT4G35000.1); Has 11368 Blast hits to 9243 proteins in 1286 species: Archae - 103; Bacteria - 4136; Metazoa - 9; Fungi - 795; Plants - 3885; Viruses - 0; Other Eukaryotes - 2440 (source: NCBI BLink).
16	at5g10290 eFP TAIR	leucine-rich repeat transmembrane protein kinase family protein	-	leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G65240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
17	at5g25370 eFP TAIR	phospholipase D alpha 3	member of C2-PLD subfamily. Analyses on the gene structures/sequences, overall amino acid sequences, and domain structures indicate that PLDalpha3 is most closely related to other two PLDalphas than to other PLDs. Phylogenetic analysis has not identified a true ortholog for PLDalpha3. Involved in hyperosmotic response.	phospholipase D alpha 3 (PLDALPHA3); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: response to water deprivation, response to salt stress, response to abscisic acid stimulus, membrane lipid catabolic process; LOCATED IN: membrane; EXPRESSED IN: leaf apex, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
18	at5g66300 eFP TAIR	NAC domain containing protein 105	Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.	NAC domain containing protein 105 (NAC105); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 76 (TAIR:AT4G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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