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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Keyword
Polarity
Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 1 " Y:" 0 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn044308 LinkIcon Negative ATH11n06208 LinkIcon - -
-
ATH11n06354 LinkIcon - -
-
ATH11n06667 LinkIcon - -
-
ATH13n09044 LinkIcon - -
-
ATH13n09707 LinkIcon - -
-
ATH14n09613 LinkIcon - -
-
ATH56n11402 LinkIcon - -
-
ATH63n10977 LinkIcon - -
-
ATH63n11490 LinkIcon - -
-
ATH63n12002 LinkIcon - -
-
2 adn056081 LinkIcon Negative ATH13n11184 LinkIcon - -
-
ATH13n11187 LinkIcon - -
-
ATH13n11622 LinkIcon - -
-
ATH13n12090 LinkIcon - -
-
ATH63n13063 LinkIcon - -
-
ATH63n13066 LinkIcon - -
-
ATH63n13837 LinkIcon - -
-
ATH63n14089 LinkIcon - -
-
3 adn091355 LinkIcon Negative ATH06n12001 LinkIcon - -
-
ATH07n13386 LinkIcon - -
-
ATH11n09034 LinkIcon - -
-
ATH13n14868 LinkIcon - -
-
ATH56n17970 LinkIcon - -
-
ATH58n18786 LinkIcon - -
-
ATH60n18012 LinkIcon - -
-
ATH63n17506 LinkIcon - -
-
4 adp007736 LinkIcon Positive ATH13p04700 LinkIcon PM018094 LinkIcon 0.999
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH13p04703 LinkIcon PM018094 LinkIcon 0.999
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH11p04214 LinkIcon PM018094 LinkIcon 0.998
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH13p05430 LinkIcon PM018094 LinkIcon 0.998
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH11p04753 LinkIcon PM018094 LinkIcon 0.997
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH13p05427 LinkIcon PM018094 LinkIcon 0.997
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH11p04217 LinkIcon PM018094 LinkIcon 0.996
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH11p04756 LinkIcon PM018094 LinkIcon 0.992
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH63p05658 LinkIcon PM018094 LinkIcon 0.982
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH61p05767 LinkIcon PM018094 LinkIcon 0.981
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH61p06286 LinkIcon PM018094 LinkIcon 0.981
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH63p04866 LinkIcon PM018094 LinkIcon 0.981
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH63p04863 LinkIcon PM018094 LinkIcon 0.975
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH63p05655 LinkIcon PM018094 LinkIcon 0.975
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH61p05770 LinkIcon PM018094 LinkIcon 0.972
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH61p06290 LinkIcon PM018094 LinkIcon 0.971
Sinapoylcholine dimer-isomer; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine dimer-isomer
ATH07p04359 LinkIcon - -
-
ATH58p05008 LinkIcon - -
-
ATH63p05125 LinkIcon - -
-
ATH64p05352 LinkIcon - -
-
5 adp007770 LinkIcon Positive ATH63p05911 LinkIcon PM018111 LinkIcon 0.960
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH63p05118 LinkIcon PM018111 LinkIcon 0.955
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH61p06554 LinkIcon PM018111 LinkIcon 0.951
Sinapoylcholine; MS2; Q-TOF; M+H; 15->55V
   Sinapoylcholine
  Sinapine
ATH06p04228 LinkIcon - -
-
ATH08p04646 LinkIcon - -
-
ATH09p04971 LinkIcon - -
-
ATH11p04514 LinkIcon - -
-
ATH11p04745 LinkIcon - -
-
ATH12p04385 LinkIcon - -
-
ATH13p04695 LinkIcon - -
-
ATH13p05417 LinkIcon - -
-
ATH13p05667 LinkIcon - -
-
ATH14p05555 LinkIcon - -
-
ATH56p04700 LinkIcon - -
-
ATH57p04567 LinkIcon - -
-
ATH61p06060 LinkIcon - -
-
ATH63p04646 LinkIcon - -
-
ATH63p05115 LinkIcon - -
-
ATH63p05907 LinkIcon - -
-
ATH64p05343 LinkIcon - -
-
ATH64p06102 LinkIcon - -
-
6 adp029084 LinkIcon Positive ATH06p10914 LinkIcon - -
-
ATH08p11695 LinkIcon - -
-
ATH11p10323 LinkIcon - -
-
ATH11p10326 LinkIcon - -
-
ATH11p10701 LinkIcon - -
-
ATH11p10987 LinkIcon - -
-
ATH13p12507 LinkIcon - -
-
ATH13p12510 LinkIcon - -
-
ATH13p12923 LinkIcon - -
-
ATH13p13147 LinkIcon - -
-
ATH56p12651 LinkIcon - -
-
ATH56p12654 LinkIcon - -
-
ATH61p13923 LinkIcon - -
-
ATH61p13926 LinkIcon - -
-
ATH61p14653 LinkIcon - -
-
ATH61p14918 LinkIcon - -
-
ATH63p14721 LinkIcon - -
-
ATH63p14724 LinkIcon - -
-
ATH63p15466 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g17810
beta-tonoplast intrinsic protein beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete beta-tonoplast intrinsic protein (BETA-TIP); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: Aquaporin-like superfamily protein (TAIR:AT1G73190.1); Has 10707 Blast hits to 10694 proteins in 2147 species: Archae - 83; Bacteria - 5023; Metazoa - 1508; Fungi - 447; Plants - 2508; Viruses - 2; Other Eukaryotes - 1136 (source: NCBI BLink).
2
at1g54870
NAD(P)-binding Rossmann-fold superfamily protein - NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G05260.1); Has 123768 Blast hits to 123548 proteins in 3620 species: Archae - 996; Bacteria - 80755; Metazoa - 5748; Fungi - 6562; Plants - 2744; Viruses - 5; Other Eukaryotes - 26958 (source: NCBI BLink).
3
at1g73190
Aquaporin-like superfamily protein Moves to the Protein Storage Vacuole in a Golgi independent manner TIP3;1; FUNCTIONS IN: water channel activity; INVOLVED IN: autophagy, transport; LOCATED IN: plant-type vacuole membrane, protein storage vacuole, membrane, central vacuole; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: beta-tonoplast intrinsic protein (TAIR:AT1G17810.1); Has 10625 Blast hits to 10599 proteins in 2166 species: Archae - 81; Bacteria - 4980; Metazoa - 1496; Fungi - 430; Plants - 2511; Viruses - 0; Other Eukaryotes - 1127 (source: NCBI BLink).
4
at3g21720
isocitrate lyase Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL). isocitrate lyase (ICL); FUNCTIONS IN: isocitrate lyase activity, catalytic activity; INVOLVED IN: carboxylic acid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, seed, leaf; CONTAINS InterPro DOMAIN/s: Isocitrate lyase/phosphorylmutase, conserved site (InterPro:IPR018523), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase (InterPro:IPR006254), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 9953 Blast hits to 7473 proteins in 1388 species: Archae - 150; Bacteria - 5572; Metazoa - 28; Fungi - 504; Plants - 171; Viruses - 0; Other Eukaryotes - 3528 (source: NCBI BLink).
5
at5g25180
cytochrome P450, family 71, subfamily B, polypeptide 14 putative cytochrome P450 "cytochrome P450, family 71, subfamily B, polypeptide 14" (CYP71B14); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: ytochrome p450, family 71, subfamily B, polypeptide 11 (TAIR:AT5G25120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
6
at5g57260
cytochrome P450, family 71, subfamily B, polypeptide 10 putative cytochrome P450 "cytochrome P450, family 71, subfamily B, polypeptide 10" (CYP71B10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 32483 Blast hits to 32205 proteins in 1643 species: Archae - 48; Bacteria - 3002; Metazoa - 11999; Fungi - 6846; Plants - 9547; Viruses - 3; Other Eukaryotes - 1038 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit