Home Gene search Metabolite search PRIMe
 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
 Highlight filters
Keyword
Polarity
Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 20 " Y:" 19 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn117543 LinkIcon Negative ATH63n19175 LinkIcon - -
-
2 adp003770 LinkIcon Positive ATH63p02466 LinkIcon PM018204 LinkIcon 0.959
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH13p01629 LinkIcon PT110880 LinkIcon 0.915
Sinapic acid; MS2; Q-Tof; [M+H]+
   Sinapic acid
  SA
  Sin
  Sinapate
  Sinapinic acid
  3,5-dimethoxy-4-hydroxycinnamic acid
  4-Hydroxy-3,5-dimethoxy-cinnamic acid
  (E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoic acid
ATH06p01886 LinkIcon - -
-
ATH06p02675 LinkIcon - -
-
ATH06p02919 LinkIcon - -
-
ATH07p01885 LinkIcon - -
-
ATH07p02408 LinkIcon - -
-
ATH08p01882 LinkIcon - -
-
ATH08p02417 LinkIcon - -
-
ATH09p01901 LinkIcon - -
-
ATH09p02424 LinkIcon - -
-
ATH10p01618 LinkIcon - -
-
ATH10p02389 LinkIcon - -
-
ATH11p02160 LinkIcon - -
-
ATH11p02697 LinkIcon - -
-
ATH12p01876 LinkIcon - -
-
ATH12p02395 LinkIcon - -
-
ATH13p01626 LinkIcon - -
-
ATH13p02945 LinkIcon - -
-
ATH13p02949 LinkIcon - -
-
ATH56p02202 LinkIcon - -
-
ATH56p03009 LinkIcon - -
-
ATH57p01667 LinkIcon - -
-
ATH58p02199 LinkIcon - -
-
ATH58p02202 LinkIcon - -
-
ATH58p02476 LinkIcon - -
-
ATH58p02737 LinkIcon - -
-
ATH59p01665 LinkIcon - -
-
ATH59p03008 LinkIcon - -
-
ATH61p03262 LinkIcon - -
-
ATH61p03795 LinkIcon - -
-
ATH61p04074 LinkIcon - -
-
ATH62p02477 LinkIcon - -
-
ATH63p01663 LinkIcon - -
-
ATH63p01926 LinkIcon - -
-
ATH63p02470 LinkIcon - -
-
ATH63p02473 LinkIcon - -
-
ATH64p02998 LinkIcon - -
-
3 adp011752 LinkIcon Positive ATH58p06823 LinkIcon PT110750 LinkIcon 0.932
4-(Methylsulfinyl)butylglucosinolate; MS2; Q-Tof; [M+H]+
   4-(Methylsulfinyl)butylglucosinolate
  4MSOB
  glucoraphanin
  4-methylsulfinylbutyl glucosinolate
  [[5-methylsulfinyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]sulfanylpentylidene]amino] hydrogen sulfate
ATH06p05227 LinkIcon - -
-
ATH06p05666 LinkIcon - -
-
ATH06p05758 LinkIcon - -
-
ATH06p06058 LinkIcon - -
-
ATH07p05044 LinkIcon - -
-
ATH07p05355 LinkIcon - -
-
ATH07p05579 LinkIcon - -
-
ATH07p05984 LinkIcon - -
-
ATH08p05291 LinkIcon - -
-
ATH08p05294 LinkIcon - -
-
ATH08p06147 LinkIcon - -
-
ATH08p06305 LinkIcon - -
-
ATH09p05257 LinkIcon - -
-
ATH09p05261 LinkIcon - -
-
ATH09p06078 LinkIcon - -
-
ATH10p04981 LinkIcon - -
-
ATH10p04984 LinkIcon - -
-
ATH10p05497 LinkIcon - -
-
ATH11p05692 LinkIcon - -
-
ATH11p05808 LinkIcon - -
-
ATH11p06108 LinkIcon - -
-
ATH12p05349 LinkIcon - -
-
ATH12p05577 LinkIcon - -
-
ATH12p05894 LinkIcon - -
-
ATH13p06065 LinkIcon - -
-
ATH13p06068 LinkIcon - -
-
ATH13p06723 LinkIcon - -
-
ATH13p06726 LinkIcon - -
-
ATH14p06267 LinkIcon - -
-
ATH14p06270 LinkIcon - -
-
ATH14p06438 LinkIcon - -
-
ATH56p05136 LinkIcon - -
-
ATH56p05714 LinkIcon - -
-
ATH57p04932 LinkIcon - -
-
ATH57p04935 LinkIcon - -
-
ATH57p05408 LinkIcon - -
-
ATH57p05410 LinkIcon - -
-
ATH58p06321 LinkIcon - -
-
ATH58p06553 LinkIcon - -
-
ATH59p05094 LinkIcon - -
-
ATH59p05097 LinkIcon - -
-
ATH59p05618 LinkIcon - -
-
ATH59p05621 LinkIcon - -
-
ATH61p07031 LinkIcon - -
-
ATH61p07034 LinkIcon - -
-
ATH61p07346 LinkIcon - -
-
ATH61p07656 LinkIcon - -
-
ATH62p04930 LinkIcon - -
-
ATH62p05219 LinkIcon - -
-
ATH62p05414 LinkIcon - -
-
ATH62p05695 LinkIcon - -
-
ATH63p05214 LinkIcon - -
-
ATH63p05217 LinkIcon - -
-
ATH63p05837 LinkIcon - -
-
ATH63p06145 LinkIcon - -
-
ATH63p06383 LinkIcon - -
-
ATH63p06903 LinkIcon - -
-
ATH63p07175 LinkIcon - -
-
ATH64p06817 LinkIcon - -
-
ATH64p07085 LinkIcon - -
-
ATH64p07088 LinkIcon - -
-
4 adp022271 LinkIcon Positive ATH06p09170 LinkIcon - -
-
ATH06p09610 LinkIcon - -
-
ATH08p09598 LinkIcon - -
-
ATH08p09971 LinkIcon - -
-
ATH12p08899 LinkIcon - -
-
ATH56p09786 LinkIcon - -
-
ATH56p10582 LinkIcon - -
-
ATH58p11834 LinkIcon - -
-
ATH61p12150 LinkIcon - -
-
ATH62p09718 LinkIcon - -
-
5 adp039553 LinkIcon Positive ATH08p12826 LinkIcon - -
-
ATH61p16784 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g31550
GDSL-like Lipase/Acylhydrolase superfamily protein - GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G28600.1); Has 3220 Blast hits to 3174 proteins in 146 species: Archae - 0; Bacteria - 172; Metazoa - 0; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
2
at1g52400
beta glucosidase 18 encodes a member of glycosyl hydrolase family 1, located in inducible ER bodies which were formed after wounding, required in inducible ER body formation beta glucosidase 18 (BGLU18); FUNCTIONS IN: abscisic acid glucose ester beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, identical protein binding; INVOLVED IN: in 6 processes; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 19 (TAIR:AT3G21370.1); Has 11362 Blast hits to 11017 proteins in 1473 species: Archae - 142; Bacteria - 7866; Metazoa - 708; Fungi - 200; Plants - 1449; Viruses - 0; Other Eukaryotes - 997 (source: NCBI BLink).
3
at1g64760
O-Glycosyl hydrolases family 17 protein - O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G19440.1); Has 2673 Blast hits to 2603 proteins in 152 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 38; Plants - 2613; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
4
at1g80850
DNA glycosylase superfamily protein - DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G15970.1); Has 3667 Blast hits to 3667 proteins in 1573 species: Archae - 10; Bacteria - 3168; Metazoa - 4; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
5
at2g19440
O-Glycosyl hydrolases family 17 protein - O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G64760.2); Has 2685 Blast hits to 2621 proteins in 154 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 44; Plants - 2618; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
6
at3g13560
O-Glycosyl hydrolases family 17 protein - O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G01630.1); Has 2864 Blast hits to 2791 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 51; Plants - 2798; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
7
at3g26200
cytochrome P450, family 71, subfamily B, polypeptide 22 putative cytochrome P450 "cytochrome P450, family 71, subfamily B, polypeptide 22" (CYP71B22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 21 (TAIR:AT3G26190.1); Has 33297 Blast hits to 32951 proteins in 1687 species: Archae - 49; Bacteria - 3030; Metazoa - 12289; Fungi - 7048; Plants - 9672; Viruses - 3; Other Eukaryotes - 1206 (source: NCBI BLink).
8
at3g54920
Pectin lyase-like superfamily protein Powdery mildew resistant mutant encodes a pectate lyase-like protein powdery mildew resistant 6 (PMR6); CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G04310.1); Has 2753 Blast hits to 2553 proteins in 415 species: Archae - 3; Bacteria - 1039; Metazoa - 313; Fungi - 409; Plants - 814; Viruses - 7; Other Eukaryotes - 168 (source: NCBI BLink).
9
at5g59480
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G02230.2); Has 2253 Blast hits to 2250 proteins in 467 species: Archae - 3; Bacteria - 705; Metazoa - 0; Fungi - 141; Plants - 199; Viruses - 0; Other Eukaryotes - 1205 (source: NCBI BLink).
10
at5g62670
H(+)-ATPase 11 - H(+)-ATPase 11 (HA11); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 4 (TAIR:AT3G47950.1); Has 36311 Blast hits to 32678 proteins in 3159 species: Archae - 691; Bacteria - 22958; Metazoa - 3912; Fungi - 2478; Plants - 1926; Viruses - 3; Other Eukaryotes - 4343 (source: NCBI BLink).

Creative Commons License
RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit