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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 21 " Y:" 1 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn035359 LinkIcon Negative ATH12n03984 LinkIcon PM018021 LinkIcon 1.000
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH10n05713 LinkIcon PM018021 LinkIcon 0.998
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH06n04780 LinkIcon PM018021 LinkIcon 0.993
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH08n07261 LinkIcon PM018021 LinkIcon 0.988
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH13n07374 LinkIcon PM018021 LinkIcon 0.983
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH14n06295 LinkIcon PM018021 LinkIcon 0.981
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH07n05105 LinkIcon PM018021 LinkIcon 0.978
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH14n06924 LinkIcon PM018021 LinkIcon 0.978
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH59n08308 LinkIcon PM018021 LinkIcon 0.978
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH07n05270 LinkIcon PM018021 LinkIcon 0.974
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH60n08457 LinkIcon PM018021 LinkIcon 0.971
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH59n09048 LinkIcon PM018021 LinkIcon 0.970
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH56n08373 LinkIcon PM018021 LinkIcon 0.968
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH10n04867 LinkIcon PM018021 LinkIcon 0.965
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH14n06292 LinkIcon PS020909 LinkIcon 0.962
D-Glucose-6-phosphate sodium salt ; MS2; QqQ; negative; CE 30 V
   D-Glucose-6-phosphate sodium salt
  G6P
  Glc-6P
  D(+)-Glucopyranose 6-phosphate sodium salt
  Robison ester
ATH14n06921 LinkIcon PS020909 LinkIcon 0.958
D-Glucose-6-phosphate sodium salt ; MS2; QqQ; negative; CE 30 V
   D-Glucose-6-phosphate sodium salt
  G6P
  Glc-6P
  D(+)-Glucopyranose 6-phosphate sodium salt
  Robison ester
ATH64n08652 LinkIcon PM018021 LinkIcon 0.958
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH62n08527 LinkIcon PS020909 LinkIcon 0.957
D-Glucose-6-phosphate sodium salt ; MS2; QqQ; negative; CE 30 V
   D-Glucose-6-phosphate sodium salt
  G6P
  Glc-6P
  D(+)-Glucopyranose 6-phosphate sodium salt
  Robison ester
ATH57n09108 LinkIcon PM018021 LinkIcon 0.955
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH64n07913 LinkIcon PS020909 LinkIcon 0.954
D-Glucose-6-phosphate sodium salt ; MS2; QqQ; negative; CE 30 V
   D-Glucose-6-phosphate sodium salt
  G6P
  Glc-6P
  D(+)-Glucopyranose 6-phosphate sodium salt
  Robison ester
ATH64n07916 LinkIcon PM018021 LinkIcon 0.952
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH60n08954 LinkIcon PM018021 LinkIcon 0.948
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH64n08649 LinkIcon PS020909 LinkIcon 0.948
D-Glucose-6-phosphate sodium salt ; MS2; QqQ; negative; CE 30 V
   D-Glucose-6-phosphate sodium salt
  G6P
  Glc-6P
  D(+)-Glucopyranose 6-phosphate sodium salt
  Robison ester
ATH56n09139 LinkIcon PM018021 LinkIcon 0.947
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH09n08035 LinkIcon PM018023 LinkIcon 0.945
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH58n09268 LinkIcon PS020909 LinkIcon 0.945
D-Glucose-6-phosphate sodium salt ; MS2; QqQ; negative; CE 30 V
   D-Glucose-6-phosphate sodium salt
  G6P
  Glc-6P
  D(+)-Glucopyranose 6-phosphate sodium salt
  Robison ester
ATH58n08749 LinkIcon PS020909 LinkIcon 0.944
D-Glucose-6-phosphate sodium salt ; MS2; QqQ; negative; CE 30 V
   D-Glucose-6-phosphate sodium salt
  G6P
  Glc-6P
  D(+)-Glucopyranose 6-phosphate sodium salt
  Robison ester
ATH62n07795 LinkIcon PM018021 LinkIcon 0.942
1-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   1-Methoxyindol-3-ylmethyl glucosinolate
ATH08n07988 LinkIcon PM018023 LinkIcon 0.937
4-Methoxyindol-3-ylmethyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   4-Methoxyindol-3-ylmethyl glucosinolate
ATH13n06912 LinkIcon PS031608 LinkIcon 0.932
o-Phospho-L-serine; MS2; QqQ; negative; CE 20 V
   o-Phospho-L-serine
  L-SOP
  Ser(P)
  3-phosphoserine
  Dexfosfoserine
  L-2-Amino-3-hydroxypropanoic acid 3-phosphate
  L-Serine O-phosphate
  Plasmenylserine
  Serine phosphate
ATH61n08456 LinkIcon PM018016 LinkIcon 0.916
3-Benzoyloxy-n-propyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   3-Benzoyloxy-n-propyl glucosinolate
ATH06n04260 LinkIcon - -
-
ATH11n04001 LinkIcon - -
-
ATH57n08620 LinkIcon - -
-
ATH57n09363 LinkIcon - -
-
ATH58n09527 LinkIcon - -
-
ATH61n07477 LinkIcon - -
-
ATH62n08280 LinkIcon - -
-
ATH63n08471 LinkIcon - -
-
2 adn041335 LinkIcon Negative ATH06n06106 LinkIcon - -
-
ATH08n09250 LinkIcon - -
-
ATH09n09582 LinkIcon - -
-
ATH10n07388 LinkIcon - -
-
ATH13n08708 LinkIcon - -
-
ATH13n09083 LinkIcon - -
-
ATH14n08165 LinkIcon - -
-
ATH14n08168 LinkIcon - -
-
ATH14n08727 LinkIcon - -
-
ATH14n08730 LinkIcon - -
-
ATH56n10686 LinkIcon - -
-
ATH58n10827 LinkIcon - -
-
ATH58n12104 LinkIcon - -
-
ATH62n09900 LinkIcon - -
-
ATH63n10012 LinkIcon - -
-
ATH63n10015 LinkIcon - -
-
ATH63n11275 LinkIcon - -
-
ATH64n10063 LinkIcon - -
-
ATH64n10066 LinkIcon - -
-
ATH64n10752 LinkIcon - -
-
ATH64n10755 LinkIcon - -
-
3 adn065049 LinkIcon Negative ATH07n11305 LinkIcon - -
-
ATH14n12059 LinkIcon - -
-
ATH14n12062 LinkIcon - -
-
ATH57n16392 LinkIcon - -
-
ATH60n16064 LinkIcon - -
-
ATH61n14686 LinkIcon - -
-
ATH62n14854 LinkIcon - -
-
ATH62n15099 LinkIcon - -
-
ATH64n14710 LinkIcon - -
-
4 adn065055 LinkIcon Negative ATH07n11311 LinkIcon - -
-
ATH07n11559 LinkIcon - -
-
ATH07n11763 LinkIcon - -
-
ATH09n13786 LinkIcon - -
-
ATH13n13452 LinkIcon - -
-
ATH14n11865 LinkIcon - -
-
ATH14n12216 LinkIcon - -
-
ATH57n15889 LinkIcon - -
-
ATH60n16072 LinkIcon - -
-
ATH61n14691 LinkIcon - -
-
ATH61n15202 LinkIcon - -
-
ATH62n14861 LinkIcon - -
-
ATH64n14718 LinkIcon - -
-
ATH64n15116 LinkIcon - -
-
5 adp001970 LinkIcon Positive ATH07p01371 LinkIcon - -
-
ATH07p02160 LinkIcon - -
-
ATH08p02166 LinkIcon - -
-
ATH09p01921 LinkIcon - -
-
ATH13p00841 LinkIcon - -
-
ATH13p02176 LinkIcon - -
-
ATH14p00844 LinkIcon - -
-
ATH14p01648 LinkIcon - -
-
ATH56p01688 LinkIcon - -
-
ATH58p01684 LinkIcon - -
-
ATH61p03009 LinkIcon - -
-
ATH61p03546 LinkIcon - -
-
ATH63p00878 LinkIcon - -
-
ATH63p01950 LinkIcon - -
-
ATH64p00873 LinkIcon - -
-
ATH64p00876 LinkIcon - -
-
ATH64p01677 LinkIcon - -
-
ATH64p01680 LinkIcon - -
-
6 adp012982 LinkIcon Positive ATH63p06442 LinkIcon PT111790 LinkIcon 0.940
Sinapoyl malate; MS2; Q-Tof; [M+H]+
   Sinapoyl malate
  Sinapoyl-(S)-malate
  2-O-sinapoylmalate
  (2S)-2-[(E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoyl]oxybutanedioic acid
ATH08p06757 LinkIcon - -
-
ATH09p05823 LinkIcon - -
-
ATH11p06410 LinkIcon - -
-
ATH14p06491 LinkIcon - -
-
ATH14p07370 LinkIcon - -
-
ATH57p05889 LinkIcon - -
-
ATH58p07824 LinkIcon - -
-
ATH59p06117 LinkIcon - -
-
ATH61p07406 LinkIcon - -
-
ATH61p07813 LinkIcon - -
-
ATH61p08235 LinkIcon - -
-
ATH63p06164 LinkIcon - -
-
ATH63p07747 LinkIcon - -
-
ATH63p08529 LinkIcon - -
-
ATH64p07139 LinkIcon - -
-
ATH64p07896 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g09090
respiratory burst oxidase homolog B NADPH-oxidase AtrbohB plays a role in seed after-ripening. Major producer of superoxide in germinating seeds. AtrbohB pre-mRNA is alternatively spliced in seeds in a hormonally and developmentally regulated manner. ABA caused accumulation of AtrbohB-゚ mRNA and prevented prevented AtrbohB-a mRNA expression in fresh seeds. respiratory burst oxidase homolog B (RBOHB); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: response to heat, seed germination, defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: embryo, root; EXPRESSED DURING: imbibition; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase homologue D (TAIR:AT5G47910.1); Has 1619 Blast hits to 1551 proteins in 238 species: Archae - 2; Bacteria - 81; Metazoa - 636; Fungi - 280; Plants - 489; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).
2
at1g15380
Lactoylglutathione lyase / glyoxalase I family protein - Lactoylglutathione lyase / glyoxalase I family protein; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G80160.1); Has 780 Blast hits to 780 proteins in 276 species: Archae - 1; Bacteria - 484; Metazoa - 4; Fungi - 2; Plants - 222; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
3
at1g33750
Terpenoid cyclases/Protein prenyltransferases superfamily protein - Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1); Has 1710 Blast hits to 1676 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1706; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
4
at3g31415
- - -
5
at3g32030
Terpenoid cyclases/Protein prenyltransferases superfamily protein - Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1); Has 1693 Blast hits to 1663 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1687; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
6
at5g14750
myb domain protein 66 Encodes a MyB-related protein containing R2 and R3 repeats, involved in root and hypocotyl epidermal cell fate determination. Loss of function mutations make extra root hairs. Nuclear localized protein is a positive regulator for expression of CAPRICE (CPC). myb domain protein 66 (MYB66); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 23 (TAIR:AT5G40330.1); Has 9181 Blast hits to 8410 proteins in 556 species: Archae - 0; Bacteria - 0; Metazoa - 822; Fungi - 534; Plants - 5944; Viruses - 3; Other Eukaryotes - 1878 (source: NCBI BLink).
7
at5g19520
mechanosensitive channel of small conductance-like 9 - mechanosensitive channel of small conductance-like 9 (MSL9); CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 10 (TAIR:AT5G12080.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
8
at5g48110
Terpenoid cyclases/Protein prenyltransferases superfamily protein - Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G70080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit