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• Gene information ▼

1. Metabolite information

No.	AtMetExp ID	Polality	MS2T ID	ReSpect
				Accession	Score	Description
1	adn037965	Negative	ATH06n04755	PM018030	0.991	Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V    Putative glucosinolate
			ATH06n05319	PM018030	0.970	Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V    Putative glucosinolate
			ATH08n08586	PM018030	0.960	Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V    Putative glucosinolate
			ATH11n04870	PM018030	0.960	Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V    Putative glucosinolate
			ATH14n07531	PM018030	0.949	Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V    Putative glucosinolate
			ATH14n07139	PM018030	0.943	Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V    Putative glucosinolate
			ATH64n08623	PM018030	0.930	Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V    Putative glucosinolate
			ATH12n03959	PM018030	0.929	Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V    Putative glucosinolate
			ATH08n07962	PM018030	0.922	Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V    Putative glucosinolate
			ATH11n04510	PM018030	0.908	Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V    Putative glucosinolate
			ATH14n06894	PM018030	0.904	Putative glucosinolate; MS2; Q-TOF; M-H; 15->55V    Putative glucosinolate
			ATH07n05243	-	-	-
			ATH07n06219	-	-	-
			ATH12n04812	-	-	-
			ATH56n09112	-	-	-
			ATH56n09868	-	-	-
			ATH57n09081	-	-	-
			ATH57n10276	-	-	-
			ATH58n09242	-	-	-
			ATH58n10262	-	-	-
			ATH60n09633	-	-	-
			ATH61n08175	-	-	-
			ATH62n08747	-	-	-
			ATH62n09213	-	-	-
			ATH64n09349	-	-	-
2	adn040032	Negative	ATH06n05303	-	-	-
			ATH06n05826	-	-	-
			ATH06n06025	-	-	-
			ATH07n06876	-	-	-
			ATH08n09168	-	-	-
			ATH09n09260	-	-	-
			ATH10n05876	-	-	-
			ATH11n04856	-	-	-
			ATH11n05368	-	-	-
			ATH12n04485	-	-	-
			ATH12n04964	-	-	-
			ATH14n07516	-	-	-
			ATH14n08084	-	-	-
			ATH56n09854	-	-	-
			ATH56n10604	-	-	-
			ATH58n09992	-	-	-
			ATH58n10749	-	-	-
			ATH59n09746	-	-	-
			ATH59n10475	-	-	-
			ATH60n10080	-	-	-
			ATH60n10320	-	-	-
			ATH61n09299	-	-	-
			ATH61n09515	-	-	-
			ATH62n09627	-	-	-
			ATH62n09822	-	-	-
			ATH64n09985	-	-	-
3	adn049706	Negative	ATH06n07458	PM018040	1.000	Isorhamnetin-dihexoside; MS2; Q-TOF; M-H; 15->55V    Isorhamnetin-dihexoside
			ATH06n07288	PM018040	0.954	Isorhamnetin-dihexoside; MS2; Q-TOF; M-H; 15->55V    Isorhamnetin-dihexoside
			ATH64n11684	PM018040	0.941	Isorhamnetin-dihexoside; MS2; Q-TOF; M-H; 15->55V    Isorhamnetin-dihexoside
			ATH58n13578	PM018040	0.936	Isorhamnetin-dihexoside; MS2; Q-TOF; M-H; 15->55V    Isorhamnetin-dihexoside
			ATH56n12368	PM018040	0.935	Isorhamnetin-dihexoside; MS2; Q-TOF; M-H; 15->55V    Isorhamnetin-dihexoside
			ATH58n12315	PM018040	0.934	Isorhamnetin-dihexoside; MS2; Q-TOF; M-H; 15->55V    Isorhamnetin-dihexoside
			ATH61n11694	PM018040	0.922	Isorhamnetin-dihexoside; MS2; Q-TOF; M-H; 15->55V    Isorhamnetin-dihexoside
			ATH56n12858	PM018040	0.900	Isorhamnetin-dihexoside; MS2; Q-TOF; M-H; 15->55V    Isorhamnetin-dihexoside
			ATH07n08493	-	-	-
			ATH08n10670	-	-	-
			ATH08n11022	-	-	-
			ATH09n10987	-	-	-
			ATH09n11587	-	-	-
			ATH11n06515	-	-	-
			ATH11n06944	-	-	-
			ATH13n10568	-	-	-
			ATH14n09253	-	-	-
			ATH14n09607	-	-	-
			ATH14n09752	-	-	-
			ATH14n09755	-	-	-
			ATH56n12614	-	-	-
			ATH57n12270	-	-	-
			ATH57n13290	-	-	-
			ATH59n12912	-	-	-
			ATH61n11230	-	-	-
			ATH61n11949	-	-	-
			ATH62n11505	-	-	-
			ATH64n11911	-	-	-
			ATH64n12132	-	-	-
4	adp019148	Positive	ATH07p07259	PT112530	0.926	Calciferol; MS2; Q-Tof; [M+H]+    Calciferol   Vitamin D2   Ergocalciferol   Viosterin   Osteil   Viosterol   Ercalciol   Irradiated ergosterol   Condacaps   Condocaps   Condol   Crtron   Crystallina   Daral   (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol   Davitin   Deltalin   Deratol   Diactol   Drisdol   Ergorone   Ertron   Fortodyl   Geltabs   Hyperkil   Irradiated ergosta-5,7,22-trien-3-beta-ol   Metadee
			ATH06p07842	-	-	-
			ATH06p07845	-	-	-
			ATH06p08357	-	-	-
			ATH06p08360	-	-	-
			ATH08p08132	-	-	-
			ATH08p08703	-	-	-
			ATH11p07821	-	-	-
			ATH11p08268	-	-	-
			ATH12p07402	-	-	-
			ATH12p07405	-	-	-
			ATH12p07807	-	-	-
			ATH13p09138	-	-	-
			ATH13p09775	-	-	-
			ATH56p07852	-	-	-
			ATH56p07855	-	-	-
			ATH56p08501	-	-	-
			ATH57p07235	-	-	-
			ATH58p09926	-	-	-
			ATH58p09929	-	-	-
			ATH58p10162	-	-	-
			ATH58p10424	-	-	-
			ATH59p07520	-	-	-
			ATH59p08140	-	-	-
			ATH61p09437	-	-	-
			ATH61p10070	-	-	-
			ATH62p07116	-	-	-
			ATH62p07687	-	-	-
			ATH63p07969	-	-	-
			ATH63p08634	-	-	-
			ATH63p11556	-	-	-

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2. Gene information

No.	ID	Short description	Curator summary	Computational description
1	at1g14185 eFP TAIR	Glucose-methanol-choline (GMC) oxidoreductase family protein	-	Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G14190.1); Has 12030 Blast hits to 11184 proteins in 1126 species: Archae - 6; Bacteria - 4157; Metazoa - 958; Fungi - 1842; Plants - 310; Viruses - 9; Other Eukaryotes - 4748 (source: NCBI BLink).
2	at1g14190 eFP TAIR	Glucose-methanol-choline (GMC) oxidoreductase family protein	-	Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G14185.1); Has 12034 Blast hits to 11141 proteins in 1120 species: Archae - 6; Bacteria - 4075; Metazoa - 1036; Fungi - 1877; Plants - 336; Viruses - 6; Other Eukaryotes - 4698 (source: NCBI BLink).
3	at1g61820 eFP TAIR	beta glucosidase 46	-	beta glucosidase 46 (BGLU46); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lignin biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 11434 Blast hits to 11077 proteins in 1473 species: Archae - 142; Bacteria - 7926; Metazoa - 720; Fungi - 201; Plants - 1444; Viruses - 0; Other Eukaryotes - 1001 (source: NCBI BLink).
4	at1g67710 eFP TAIR	response regulator 11	Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.	response regulator 11 (ARR11); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.1); Has 111784 Blast hits to 110359 proteins in 3115 species: Archae - 722; Bacteria - 99003; Metazoa - 40; Fungi - 775; Plants - 2897; Viruses - 3; Other Eukaryotes - 8344 (source: NCBI BLink).
5	at2g28970 eFP TAIR	Leucine-rich repeat protein kinase family protein	-	Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G28990.1); Has 169810 Blast hits to 124514 proteins in 4517 species: Archae - 105; Bacteria - 13883; Metazoa - 45515; Fungi - 10149; Plants - 80466; Viruses - 403; Other Eukaryotes - 19289 (source: NCBI BLink).
6	at2g31020 eFP TAIR	OSBP(oxysterol binding protein)-related protein 1A	-	OSBP(oxysterol binding protein)-related protein 1A (ORP1A); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1C (TAIR:AT4G08180.1); Has 2870 Blast hits to 2614 proteins in 228 species: Archae - 2; Bacteria - 10; Metazoa - 1527; Fungi - 710; Plants - 301; Viruses - 8; Other Eukaryotes - 312 (source: NCBI BLink).
7	at2g31030 eFP TAIR	OSBP(oxysterol binding protein)-related protein 1B	-	OSBP(oxysterol binding protein)-related protein 1B (ORP1B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 2291 Blast hits to 2240 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1139; Fungi - 602; Plants - 285; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink).
8	at2g34140 eFP TAIR	Dof-type zinc finger DNA-binding family protein	-	Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G29160.1); Has 1074 Blast hits to 1069 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1069; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
9	at3g09260 eFP TAIR	Glycosyl hydrolase superfamily protein	Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings. Exist in an soluble (inactive) and non-soluble (active) form, most probably formed in a polymerization process. Involved in the mutualistic interaction between Arabidopsis and the endophytic fungus Piriformospora indica.	PYK10; FUNCTIONS IN: beta-glucosidase activity, copper ion binding, hydrolase activity, hydrolyzing O-glycosyl compounds, fucosidase activity; INVOLVED IN: ER body organization, response to salt stress, response to symbiotic fungus, cellular response to cold, response to osmotic stress; LOCATED IN: peroxisome, nucleus, vacuole, membrane, ER body; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G66280.1); Has 11331 Blast hits to 11008 proteins in 1473 species: Archae - 140; Bacteria - 7847; Metazoa - 701; Fungi - 200; Plants - 1444; Viruses - 0; Other Eukaryotes - 999 (source: NCBI BLink).
10	at3g16420 eFP TAIR	PYK10-binding protein 1	The PBP1(PYK10-binding protein 1) assists the PYK10 (beta-glucosidase complex) in its activity and may act like a molecular chaperone that facilitates the correct polymerization of PYK10, when tissues are damaged and subcellular structures are destroyed by pests.	PYK10-binding protein 1 (PBP1); FUNCTIONS IN: copper ion binding; INVOLVED IN: protein folding; LOCATED IN: cytosol, nucleus; EXPRESSED IN: root, seed, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: jacalin-related lectin 31 (TAIR:AT3G16430.2); Has 1598 Blast hits to 769 proteins in 41 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 1590; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
11	at3g16430 eFP TAIR	jacalin-related lectin 31	-	jacalin-related lectin 31 (JAL31); FUNCTIONS IN: copper ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: PYK10-binding protein 1 (TAIR:AT3G16420.3); Has 1533 Blast hits to 750 proteins in 40 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 1528; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
12	at4g33420 eFP TAIR	Peroxidase superfamily protein	-	Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
13	at5g01830 eFP TAIR	ARM repeat superfamily protein	-	ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 17 (TAIR:AT1G29340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
14	at5g05160 eFP TAIR	Leucine-rich repeat protein kinase family protein	-	Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
15	at5g28080 eFP TAIR	Protein kinase superfamily protein	Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases.	WNK9; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 1 (TAIR:AT3G04910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
16	at5g44160 eFP TAIR	C2H2-like zinc finger protein	-	nutcracker (NUC); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: primary root apical meristem, stem vascular system, embryo, root, embryonic root; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G03840.1); Has 52823 Blast hits to 19358 proteins in 362 species: Archae - 0; Bacteria - 0; Metazoa - 50211; Fungi - 300; Plants - 764; Viruses - 0; Other Eukaryotes - 1548 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit