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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
 Highlight filters
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Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 27 " Y:" 19 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn030968 LinkIcon Negative ATH06n03199 LinkIcon - -
-
ATH06n03202 LinkIcon - -
-
ATH06n03734 LinkIcon - -
-
ATH06n04146 LinkIcon - -
-
ATH07n03544 LinkIcon - -
-
ATH07n03547 LinkIcon - -
-
ATH07n04100 LinkIcon - -
-
ATH07n04103 LinkIcon - -
-
ATH08n06031 LinkIcon - -
-
ATH08n06034 LinkIcon - -
-
ATH08n06608 LinkIcon - -
-
ATH08n06860 LinkIcon - -
-
ATH09n06112 LinkIcon - -
-
ATH09n06115 LinkIcon - -
-
ATH09n06752 LinkIcon - -
-
ATH09n07012 LinkIcon - -
-
ATH10n03735 LinkIcon - -
-
ATH10n03989 LinkIcon - -
-
ATH10n04400 LinkIcon - -
-
ATH10n04403 LinkIcon - -
-
ATH11n02909 LinkIcon - -
-
ATH11n02913 LinkIcon - -
-
ATH11n03369 LinkIcon - -
-
ATH11n03682 LinkIcon - -
-
ATH12n02684 LinkIcon - -
-
ATH12n02688 LinkIcon - -
-
ATH12n03103 LinkIcon - -
-
ATH12n03108 LinkIcon - -
-
ATH14n05593 LinkIcon - -
-
ATH14n05742 LinkIcon - -
-
ATH56n06878 LinkIcon - -
-
ATH56n06881 LinkIcon - -
-
ATH56n07624 LinkIcon - -
-
ATH56n07627 LinkIcon - -
-
ATH57n06906 LinkIcon - -
-
ATH57n06909 LinkIcon - -
-
ATH57n07633 LinkIcon - -
-
ATH57n07636 LinkIcon - -
-
ATH58n06971 LinkIcon - -
-
ATH58n06974 LinkIcon - -
-
ATH58n07739 LinkIcon - -
-
ATH58n07742 LinkIcon - -
-
ATH59n06828 LinkIcon - -
-
ATH59n06831 LinkIcon - -
-
ATH59n07569 LinkIcon - -
-
ATH59n07572 LinkIcon - -
-
ATH60n06756 LinkIcon - -
-
ATH60n06759 LinkIcon - -
-
ATH60n07487 LinkIcon - -
-
ATH60n07738 LinkIcon - -
-
ATH61n06100 LinkIcon - -
-
ATH61n06103 LinkIcon - -
-
ATH61n06775 LinkIcon - -
-
ATH61n07037 LinkIcon - -
-
ATH62n06658 LinkIcon - -
-
ATH62n06662 LinkIcon - -
-
ATH62n07077 LinkIcon - -
-
ATH64n06512 LinkIcon - -
-
ATH64n06788 LinkIcon - -
-
ATH64n07207 LinkIcon - -
-
ATH64n07713 LinkIcon - -
-
2 adn092206 LinkIcon Negative ATH10n12345 LinkIcon - -
-
ATH11n09178 LinkIcon - -
-
ATH12n07959 LinkIcon - -
-
ATH14n13427 LinkIcon - -
-
ATH56n18213 LinkIcon - -
-
ATH57n18417 LinkIcon - -
-
ATH58n18794 LinkIcon - -
-
ATH62n16883 LinkIcon - -
-
ATH64n16765 LinkIcon - -
-
3 adp003588 LinkIcon Positive ATH11p01944 LinkIcon PM018204 LinkIcon 0.997
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH13p02202 LinkIcon PM018204 LinkIcon 0.991
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH13p02471 LinkIcon PM018204 LinkIcon 0.989
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH11p02971 LinkIcon PM018204 LinkIcon 0.988
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH14p02210 LinkIcon PM018204 LinkIcon 0.987
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH14p02213 LinkIcon PM018204 LinkIcon 0.986
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH14p02482 LinkIcon PM018204 LinkIcon 0.984
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH61p03572 LinkIcon PM018204 LinkIcon 0.973
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH61p03575 LinkIcon PM018204 LinkIcon 0.970
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH63p01975 LinkIcon PM018204 LinkIcon 0.963
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH12p01920 LinkIcon PM018204 LinkIcon 0.962
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH64p02243 LinkIcon PM018204 LinkIcon 0.962
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH58p02517 LinkIcon PM018204 LinkIcon 0.960
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH58p02244 LinkIcon PM018204 LinkIcon 0.959
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH62p01710 LinkIcon PM018204 LinkIcon 0.955
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH63p01710 LinkIcon PM018204 LinkIcon 0.953
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH11p01677 LinkIcon PM018204 LinkIcon 0.952
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH62p02531 LinkIcon PM018204 LinkIcon 0.952
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH61p04646 LinkIcon PM018204 LinkIcon 0.945
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH06p02453 LinkIcon PM018204 LinkIcon 0.943
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH63p02781 LinkIcon PM018204 LinkIcon 0.938
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH64p01704 LinkIcon PM018204 LinkIcon 0.930
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH64p02781 LinkIcon PM018204 LinkIcon 0.930
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH61p04116 LinkIcon PM018204 LinkIcon 0.915
9-(Methylsulfinyl)nonanenitrile; MS2; Q-TOF; M+H; 15->55V
   9-(Methylsulfinyl)nonanenitrile
ATH06p01930 LinkIcon - -
-
ATH08p02463 LinkIcon - -
-
ATH09p01950 LinkIcon - -
-
ATH09p02203 LinkIcon - -
-
ATH09p02474 LinkIcon - -
-
ATH09p02744 LinkIcon - -
-
ATH11p02738 LinkIcon - -
-
ATH13p02199 LinkIcon - -
-
ATH14p02478 LinkIcon - -
-
ATH56p01713 LinkIcon - -
-
ATH56p02522 LinkIcon - -
-
ATH56p02800 LinkIcon - -
-
ATH57p02249 LinkIcon - -
-
ATH57p03048 LinkIcon - -
-
ATH59p02246 LinkIcon - -
-
ATH59p03050 LinkIcon - -
-
ATH61p03839 LinkIcon - -
-
ATH61p04642 LinkIcon - -
-
ATH61p04645 LinkIcon - -
-
ATH62p02246 LinkIcon - -
-
ATH63p02514 LinkIcon - -
-
ATH63p02789 LinkIcon - -
-
ATH63p03038 LinkIcon - -
-
ATH64p02778 LinkIcon - -
-
4 adp016420 LinkIcon Positive ATH63p07433 LinkIcon PM018106 LinkIcon 0.988
Vanilloylcholine 4-O-hexoside; MS2; Q-TOF; M+H; 15->55V
   Vanilloylcholine 4-O-hexoside
  4-Hexosyloxy-3-methoxybenzoylcholine
ATH06p06830 LinkIcon - -
-
ATH06p07398 LinkIcon - -
-
ATH07p06445 LinkIcon - -
-
ATH07p06852 LinkIcon - -
-
ATH08p07079 LinkIcon - -
-
ATH08p07608 LinkIcon - -
-
ATH09p06688 LinkIcon - -
-
ATH09p07178 LinkIcon - -
-
ATH10p06414 LinkIcon - -
-
ATH10p06802 LinkIcon - -
-
ATH11p06928 LinkIcon - -
-
ATH11p07637 LinkIcon - -
-
ATH12p06614 LinkIcon - -
-
ATH12p06622 LinkIcon - -
-
ATH12p07012 LinkIcon - -
-
ATH14p07562 LinkIcon - -
-
ATH14p07785 LinkIcon - -
-
ATH14p08120 LinkIcon - -
-
ATH14p08479 LinkIcon - -
-
ATH56p06792 LinkIcon - -
-
ATH56p06797 LinkIcon - -
-
ATH56p07310 LinkIcon - -
-
ATH56p07594 LinkIcon - -
-
ATH57p06309 LinkIcon - -
-
ATH57p06312 LinkIcon - -
-
ATH57p06724 LinkIcon - -
-
ATH58p08023 LinkIcon - -
-
ATH58p08750 LinkIcon - -
-
ATH59p06502 LinkIcon - -
-
ATH59p07219 LinkIcon - -
-
ATH61p08643 LinkIcon - -
-
ATH61p08783 LinkIcon - -
-
ATH61p09199 LinkIcon - -
-
ATH62p06281 LinkIcon - -
-
ATH62p06666 LinkIcon - -
-
ATH63p06901 LinkIcon - -
-
ATH63p07159 LinkIcon - -
-
ATH64p08675 LinkIcon - -
-
ATH64p08934 LinkIcon - -
-
ATH64p09675 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g02670
P-loop containing nucleoside triphosphate hydrolases superfamily protein - P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT1G05120.1); Has 20658 Blast hits to 14879 proteins in 1788 species: Archae - 141; Bacteria - 6646; Metazoa - 3824; Fungi - 4666; Plants - 1875; Viruses - 121; Other Eukaryotes - 3385 (source: NCBI BLink).
2
at1g14900
high mobility group A Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA. high mobility group A (HMGA); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent, nucleosome assembly; LOCATED IN: cytosol, nuclear chromatin, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), High mobility group, HMG-I/HMG-Y (InterPro:IPR000116), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G18035.1); Has 1377 Blast hits to 1228 proteins in 223 species: Archae - 0; Bacteria - 119; Metazoa - 428; Fungi - 179; Plants - 544; Viruses - 9; Other Eukaryotes - 98 (source: NCBI BLink).
3
at1g22490
basic helix-loop-helix (bHLH) DNA-binding superfamily protein - basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 1544 Blast hits to 1534 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 34; Plants - 1460; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
4
at1g68480
C2H2 and C2HC zinc fingers superfamily protein Encodes a putative zinc finger transcription factor that is necessary for proper lateral organ shape and is sufficient to induce the proliferation of lateral organ tissue. Together with NUB, it is involved in stamen and carpel development. JAGGED (JAG); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G13400.1); Has 723 Blast hits to 723 proteins in 72 species: Archae - 0; Bacteria - 6; Metazoa - 56; Fungi - 19; Plants - 626; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
5
at2g24650
DNA binding;DNA binding;sequence-specific DNA binding transcription factors - DNA binding;DNA binding;sequence-specific DNA binding transcription factors; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: transcriptional factor B3 family protein (TAIR:AT2G24680.1); Has 1264 Blast hits to 283 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1262; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
6
at3g57830
Leucine-rich repeat protein kinase family protein - Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G42290.1); Has 115878 Blast hits to 74055 proteins in 2436 species: Archae - 82; Bacteria - 7967; Metazoa - 22555; Fungi - 3788; Plants - 70683; Viruses - 150; Other Eukaryotes - 10653 (source: NCBI BLink).
7
at4g00260
Transcriptional factor B3 family protein - maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
8
at4g20320
CTP synthase family protein - CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT1G30820.1); Has 10893 Blast hits to 10859 proteins in 2946 species: Archae - 237; Bacteria - 5540; Metazoa - 255; Fungi - 235; Plants - 169; Viruses - 0; Other Eukaryotes - 4457 (source: NCBI BLink).
9
at4g23800
HMG (high mobility group) box protein - HMG (high mobility group) box protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein (TAIR:AT4G11080.1); Has 73209 Blast hits to 39847 proteins in 2254 species: Archae - 389; Bacteria - 7210; Metazoa - 37524; Fungi - 4636; Plants - 3006; Viruses - 229; Other Eukaryotes - 20215 (source: NCBI BLink).
10
at4g24670
tryptophan aminotransferase related 2 Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. Double mutant analyses suggest that this protein is involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. tryptophan aminotransferase related 2 (TAR2); FUNCTIONS IN: L-tryptophan:2-oxoglutarate aminotransferase activity, carbon-sulfur lyase activity, L-tryptophan:pyruvate aminotransferase activity; INVOLVED IN: in 12 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase related 1 (TAIR:AT1G23320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
11
at4g29360
O-Glycosyl hydrolases family 17 protein - O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G56590.1); Has 2836 Blast hits to 2784 proteins in 145 species: Archae - 0; Bacteria - 6; Metazoa - 3; Fungi - 20; Plants - 2794; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
12
at5g07660
structural maintenance of chromosomes 6A Encodes SMC6A (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6A), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage. structural maintenance of chromosomes 6A (SMC6A); FUNCTIONS IN: two-component sensor activity, ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation, response to X-ray, double-strand break repair via homologous recombination; LOCATED IN: chromosome, nucleus, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G61460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
13
at5g25475
AP2/B3-like transcriptional factor family protein - AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G25470.2); Has 122 Blast hits to 121 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
14
at5g67260
CYCLIN D3;2 Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development. CYCLIN D3;2 (CYCD3;2); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;3 (TAIR:AT3G50070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit