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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 27 " Y:" 3 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn041365 LinkIcon Negative ATH07n07727 LinkIcon - -
-
ATH13n09452 LinkIcon - -
-
ATH14n08298 LinkIcon - -
-
ATH14n08467 LinkIcon - -
-
ATH14n08854 LinkIcon - -
-
ATH56n11084 LinkIcon - -
-
ATH58n10977 LinkIcon - -
-
ATH64n10437 LinkIcon - -
-
ATH64n10648 LinkIcon - -
-
2 adn048291 LinkIcon Negative ATH06n07605 LinkIcon PM017601 LinkIcon 0.987
Quercetin 3,7,4'-triglucoside; MS2; QIT; M-H; 40%
   Quercetin 3,7,4'-triglucoside
ATH14n10094 LinkIcon PM009001 LinkIcon 0.932
Quercetin 3,3',4'-triglucoside; MS2; QIT; M-H; 0.3->2V
   Quercetin 3,3',4'-triglucoside
ATH08n10415 LinkIcon PM017601 LinkIcon 0.917
Quercetin 3,7,4'-triglucoside; MS2; QIT; M-H; 40%
   Quercetin 3,7,4'-triglucoside
ATH63n12484 LinkIcon PS121908 LinkIcon 0.913
Quercetin-3,4'-O-di-beta-glucopyranoside; MS2; QqQ; negative; CE 20 V
   Quercetin-3,4'-O-di-beta-glucopyranoside
  Que 3,4'-di-Glc
  Quercetin 3,4'-diglucoside
ATH14n10091 LinkIcon PM017601 LinkIcon 0.912
Quercetin 3,7,4'-triglucoside; MS2; QIT; M-H; 40%
   Quercetin 3,7,4'-triglucoside
ATH08n11262 LinkIcon - -
-
ATH09n10785 LinkIcon - -
-
ATH10n07520 LinkIcon - -
-
ATH10n08589 LinkIcon - -
-
ATH11n06648 LinkIcon - -
-
ATH11n06794 LinkIcon - -
-
ATH13n09685 LinkIcon - -
-
ATH13n09688 LinkIcon - -
-
ATH13n10340 LinkIcon - -
-
ATH14n09239 LinkIcon - -
-
ATH14n09242 LinkIcon - -
-
ATH56n12096 LinkIcon - -
-
ATH56n13320 LinkIcon - -
-
ATH57n12002 LinkIcon - -
-
ATH58n12805 LinkIcon - -
-
ATH58n12808 LinkIcon - -
-
ATH59n12163 LinkIcon - -
-
ATH60n11799 LinkIcon - -
-
ATH60n12998 LinkIcon - -
-
ATH63n11470 LinkIcon - -
-
ATH63n11473 LinkIcon - -
-
ATH63n12739 LinkIcon - -
-
ATH64n11414 LinkIcon - -
-
ATH64n11901 LinkIcon - -
-
ATH64n12358 LinkIcon - -
-
3 adn065031 LinkIcon Negative ATH11n08291 LinkIcon - -
-
ATH14n12034 LinkIcon - -
-
ATH56n15677 LinkIcon - -
-
ATH58n16337 LinkIcon - -
-
ATH61n15168 LinkIcon - -
-
ATH62n15291 LinkIcon - -
-
ATH64n14684 LinkIcon - -
-
4 adp011436 LinkIcon Positive ATH13p06566 LinkIcon - -
-
ATH14p05928 LinkIcon - -
-
ATH14p05931 LinkIcon - -
-
ATH14p06699 LinkIcon - -
-
ATH61p07262 LinkIcon - -
-
ATH63p06167 LinkIcon - -
-
ATH63p06702 LinkIcon - -
-
ATH63p06963 LinkIcon - -
-
ATH63p07492 LinkIcon - -
-
ATH64p06627 LinkIcon - -
-
ATH64p07394 LinkIcon - -
-
5 adp032045 LinkIcon Positive ATH14p12397 LinkIcon PM018166 LinkIcon 1.000
Quercetin-dihexoside-rhamnoside-isomer; MS2; Q-TOF; M+H; 15->55V
   Quercetin-dihexoside-rhamnoside-isomer
ATH13p13885 LinkIcon PM018166 LinkIcon 0.991
Quercetin-dihexoside-rhamnoside-isomer; MS2; Q-TOF; M+H; 15->55V
   Quercetin-dihexoside-rhamnoside-isomer
ATH64p14938 LinkIcon PS121201 LinkIcon 0.987
Delphinidin; MS2; QqQ; positive; CE 10 V
   Delphinidin
  Dp
  Delphinidine
  Delphinidol
  Delfinidol
  Ephdine
  3,3',4',5,5',7-Hexahydroxy-2-phenylbenzopyrylium
  3,3',4',5,5',7-Hexahydroxyflavylium
  3,5,7-trihydroxy-2-(3,4,5-trihydroxyphenyl)benzopyrylium
ATH63p16209 LinkIcon PM018166 LinkIcon 0.966
Quercetin-dihexoside-rhamnoside-isomer; MS2; Q-TOF; M+H; 15->55V
   Quercetin-dihexoside-rhamnoside-isomer
ATH13p13506 LinkIcon PS043501 LinkIcon 0.954
Quercitrin; MS2; QqQ; positive; CE 10 V
   Quercitrin
  Quer-3-Rha
  Quercitrin
  thujin
  Quercetrin
  Quercimelin
  Quercitroside
  quercetin-3-O-rhamnoside
  Quercetin- 3-(6-deoxy-alpha-L-mannopyranoside)
  3,3',4',5,7-Pentahydroxyflavone-3-L-rhamnoside
ATH06p11758 LinkIcon PT111690 LinkIcon 0.950
Quercetin-3,7-O-alpha-L-dirhamnopyranoside; MS2; Q-Tof; [M+H]+
   Quercetin-3,7-O-alpha-L-dirhamnopyranoside
  Quer-3-Rha-7-Rha
  Quercetin-3-rhamnoside-7-rhamnoside
ATH12p10355 LinkIcon PT112580 LinkIcon 0.920
delta-Tocotrienol; MS2; Q-Tof; [M+H]+
   delta-Tocotrienol
  8-Methyltocotrienol
  (R)-delta-Tocotrienol
  (2R)-2,8-dimethyl-2-[(3E,7E)-4,8,12-trimethyltrideca-3,7,11-trienyl]chroman-6-ol
ATH58p14706 LinkIcon PT111750 LinkIcon 0.905
Quercetin-3-O-b-glucopyranosyl-7-O-a-rhamnopyranoside; MS2; Q-Tof; [M+H]+
   Quercetin-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside
  Quer-3-Glc-7-Rha
  SPECIES
  quercetin-3-glucoside-7-rhamnoside
ATH14p12305 LinkIcon PM018166 LinkIcon 0.903
Quercetin-dihexoside-rhamnoside-isomer; MS2; Q-TOF; M+H; 15->55V
   Quercetin-dihexoside-rhamnoside-isomer
ATH08p12098 LinkIcon - -
-
ATH09p10993 LinkIcon - -
-
ATH12p10353 LinkIcon - -
-
ATH56p13846 LinkIcon - -
-
ATH61p15338 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g03850
Glutaredoxin family protein - Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: response to cytokinin stimulus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G28480.1); Has 446 Blast hits to 446 proteins in 30 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 5; Plants - 435; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
2
at1g51850
Leucine-rich repeat protein kinase family protein - Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51820.1); Has 171252 Blast hits to 122960 proteins in 4539 species: Archae - 111; Bacteria - 14101; Metazoa - 44553; Fungi - 9964; Plants - 82714; Viruses - 410; Other Eukaryotes - 19399 (source: NCBI BLink).
3
at1g51860
Leucine-rich repeat protein kinase family protein - Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: root hair specific 6 (TAIR:AT1G51880.1); Has 130458 Blast hits to 118907 proteins in 4509 species: Archae - 103; Bacteria - 13378; Metazoa - 43517; Fungi - 9721; Plants - 46311; Viruses - 360; Other Eukaryotes - 17068 (source: NCBI BLink).
4
at1g76790
O-methyltransferase family protein - O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G21100.1); Has 3410 Blast hits to 3406 proteins in 587 species: Archae - 1; Bacteria - 1002; Metazoa - 109; Fungi - 633; Plants - 1541; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
5
at2g34180
CBL-interacting protein kinase 13 Encodes CBL-interacting protein kinase 13 (CIPK13). CBL-interacting protein kinase 13 (CIPK13); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: root, pollen tube; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 18 (TAIR:AT1G29230.1); Has 130054 Blast hits to 127991 proteins in 4467 species: Archae - 168; Bacteria - 15242; Metazoa - 47793; Fungi - 12893; Plants - 31934; Viruses - 521; Other Eukaryotes - 21503 (source: NCBI BLink).
6
at2g36890
Duplicated homeodomain-like superfamily protein "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB38, regulates axillary meristem formation. " REGULATOR OF AXILLARY MERISTEMS 2 (RAX2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 37 (TAIR:AT5G23000.1); Has 8785 Blast hits to 8145 proteins in 459 species: Archae - 0; Bacteria - 0; Metazoa - 710; Fungi - 476; Plants - 5916; Viruses - 4; Other Eukaryotes - 1679 (source: NCBI BLink).
7
at3g50400
GDSL-like Lipase/Acylhydrolase superfamily protein - GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G23540.1); Has 3614 Blast hits to 3577 proteins in 268 species: Archae - 0; Bacteria - 447; Metazoa - 0; Fungi - 31; Plants - 3117; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
8
at3g61300
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 6422 Blast hits to 4830 proteins in 287 species: Archae - 0; Bacteria - 0; Metazoa - 3763; Fungi - 508; Plants - 1619; Viruses - 8; Other Eukaryotes - 524 (source: NCBI BLink).
9
at5g23190
cytochrome P450, family 86, subfamily B, polypeptide 1 cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development. "cytochrome P450, family 86, subfamily B, polypeptide 1" (CYP86B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: very long-chain fatty acid biosynthetic process, suberin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G08250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
10
at5g54230
myb domain protein 49 Encodes a putative transcription factor (MYB49). myb domain protein 49 (MYB49); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: MYB-like 102 (TAIR:AT4G21440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
11
at5g58910
laccase 16 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 16 (LAC16); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: apoplast; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Laccase (InterPro:IPR017761), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT2G38080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit