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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 28 " Y:" 21 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn032353 LinkIcon Negative ATH62n07729 LinkIcon PS108209 LinkIcon 0.909
(2R)-2-Hydroxy-2-phenethylglucosinolate; MS2; QqQ; negative; CE 30 V
   (2R)-2-Hydroxy-2-phenethylglucosinolate
  Glucosibarin
ATH07n04002 LinkIcon - -
-
ATH07n04584 LinkIcon - -
-
ATH10n04309 LinkIcon - -
-
ATH10n04795 LinkIcon - -
-
ATH11n03279 LinkIcon - -
-
ATH12n03010 LinkIcon - -
-
ATH56n08047 LinkIcon - -
-
ATH57n07552 LinkIcon - -
-
ATH57n08296 LinkIcon - -
-
ATH60n08391 LinkIcon - -
-
2 adp016742 LinkIcon Positive ATH08p08107 LinkIcon PM018121 LinkIcon 0.994
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH06p07308 LinkIcon PM018121 LinkIcon 0.993
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH06p07821 LinkIcon PM018121 LinkIcon 0.989
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH08p07528 LinkIcon PM018121 LinkIcon 0.986
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH08p07524 LinkIcon PM018121 LinkIcon 0.978
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH11p07295 LinkIcon PM018121 LinkIcon 0.978
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH11p07799 LinkIcon PM018121 LinkIcon 0.977
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH12p06921 LinkIcon PM018121 LinkIcon 0.977
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH11p07796 LinkIcon PM018121 LinkIcon 0.976
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH11p07299 LinkIcon PM018121 LinkIcon 0.973
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH08p08110 LinkIcon PM018121 LinkIcon 0.969
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH13p08483 LinkIcon PM018121 LinkIcon 0.964
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH12p07379 LinkIcon PM018121 LinkIcon 0.963
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH12p07376 LinkIcon PM018121 LinkIcon 0.962
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH06p07823 LinkIcon PM018121 LinkIcon 0.961
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH13p09117 LinkIcon PM018121 LinkIcon 0.949
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH07p07234 LinkIcon PM018121 LinkIcon 0.939
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH12p07222 LinkIcon PM018121 LinkIcon 0.908
4-Methylsulfinyl-n-butyl glucosinolate; MS2; Q-TOF; M+H; 15->55V
   4-Methylsulfinyl-n-butyl glucosinolate
  glucoraphanin
ATH06p07311 LinkIcon - -
-
ATH07p06766 LinkIcon - -
-
ATH07p07229 LinkIcon - -
-
ATH56p07221 LinkIcon - -
-
ATH56p07224 LinkIcon - -
-
ATH56p07824 LinkIcon - -
-
ATH56p07828 LinkIcon - -
-
ATH57p06636 LinkIcon - -
-
ATH57p07207 LinkIcon - -
-
ATH57p07209 LinkIcon - -
-
ATH57p07213 LinkIcon - -
-
ATH58p08670 LinkIcon - -
-
ATH58p08673 LinkIcon - -
-
ATH58p09430 LinkIcon - -
-
ATH58p09435 LinkIcon - -
-
ATH59p06879 LinkIcon - -
-
ATH61p08836 LinkIcon - -
-
ATH61p08840 LinkIcon - -
-
ATH61p09407 LinkIcon - -
-
ATH61p09410 LinkIcon - -
-
ATH62p06571 LinkIcon - -
-
ATH62p06575 LinkIcon - -
-
ATH62p07088 LinkIcon - -
-
ATH62p07092 LinkIcon - -
-
ATH63p07948 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at2g35310
Transcriptional factor B3 family protein - Transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT5G09780.1); Has 300 Blast hits to 280 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
2
at2g42200
squamosa promoter binding protein-like 9 Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b. SPL activity nonautonomously inhibits initiation of new leaves at the shoot apical meristem. squamosa promoter binding protein-like 9 (SPL9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, regulation of leaf formation, leaf development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 15 (TAIR:AT3G57920.1); Has 3664 Blast hits to 3108 proteins in 157 species: Archae - 2; Bacteria - 85; Metazoa - 116; Fungi - 125; Plants - 880; Viruses - 2; Other Eukaryotes - 2454 (source: NCBI BLink).
3
at3g02110
serine carboxypeptidase-like 25 - serine carboxypeptidase-like 25 (scpl25); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G30610.1); Has 3637 Blast hits to 3574 proteins in 364 species: Archae - 0; Bacteria - 191; Metazoa - 636; Fungi - 868; Plants - 1530; Viruses - 0; Other Eukaryotes - 412 (source: NCBI BLink).
4
at3g05600
alpha/beta-Hydrolases superfamily protein - alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G02340.1); Has 14882 Blast hits to 14851 proteins in 1621 species: Archae - 134; Bacteria - 10471; Metazoa - 578; Fungi - 458; Plants - 569; Viruses - 1; Other Eukaryotes - 2671 (source: NCBI BLink).
5
at3g05790
lon protease 4 Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins. lon protease 4 (LON4); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Peptidase S16, active site (InterPro:IPR008268), Peptidase S16, ATP-dependent protease La (InterPro:IPR004815), Peptidase S16, lon N-terminal (InterPro:IPR003111), Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: lon protease 1 (TAIR:AT5G26860.1); Has 17176 Blast hits to 15609 proteins in 2554 species: Archae - 375; Bacteria - 9875; Metazoa - 528; Fungi - 538; Plants - 282; Viruses - 3; Other Eukaryotes - 5575 (source: NCBI BLink).
6
at4g02290
glycosyl hydrolase 9B13 - glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1); Has 1736 Blast hits to 1717 proteins in 249 species: Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17; Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
7
at4g21590
endonuclease 3 Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed in the floral meristem and during stamen development. endonuclease 3 (ENDO3); FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: stamen development, DNA catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C/P1 nuclease, core (InterPro:IPR008947), S1/P1 nuclease (InterPro:IPR003154); BEST Arabidopsis thaliana protein match is: endonuclease 5 (TAIR:AT4G21600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit