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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
 Highlight filters
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Polarity
Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 28 " Y:" 3 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn002323 LinkIcon Negative ATH61n00336 LinkIcon PS028708 LinkIcon 0.995
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH64n00349 LinkIcon PS028708 LinkIcon 0.980
L-Pyroglutamic acid; MS2; QqQ; negative; CE 20 V
   L-Pyroglutamic acid
  pGlu
  pyroGlu
  Pyroglutamate
  Pidolic acid
  L-Glutimic acid
  L-5-Oxoproline
  (S)-(?)-2-Pyrrolidone-5-carboxylic acid
  (S)-5-Oxo-2-pyrrolidinecarboxylic acid
  L-a-Aminoglutaric Acid Lactam
  L-5-Oxo-2-pyrrolidinecarboxylic acid
  Pidolic acid
ATH07n00016 LinkIcon - -
-
ATH58n00023 LinkIcon - -
-
ATH59n00523 LinkIcon - -
-
2 adn031248 LinkIcon Negative ATH06n03184 LinkIcon - -
-
ATH07n03529 LinkIcon - -
-
ATH07n04370 LinkIcon - -
-
ATH09n06099 LinkIcon - -
-
ATH09n06994 LinkIcon - -
-
ATH10n03977 LinkIcon - -
-
ATH14n05577 LinkIcon - -
-
ATH14n05580 LinkIcon - -
-
ATH14n05962 LinkIcon - -
-
ATH56n06863 LinkIcon - -
-
ATH59n07313 LinkIcon - -
-
ATH60n07239 LinkIcon - -
-
ATH61n06355 LinkIcon - -
-
ATH64n06497 LinkIcon - -
-
ATH64n07458 LinkIcon - -
-
3 adn036346 LinkIcon Negative ATH06n04497 LinkIcon - -
-
ATH06n05005 LinkIcon - -
-
ATH07n05118 LinkIcon - -
-
ATH14n06306 LinkIcon - -
-
ATH14n07391 LinkIcon - -
-
ATH62n08289 LinkIcon - -
-
ATH64n08182 LinkIcon - -
-
4 adn036828 LinkIcon Negative ATH08n08292 LinkIcon - -
-
ATH09n08541 LinkIcon - -
-
ATH10n05328 LinkIcon - -
-
ATH10n05975 LinkIcon - -
-
ATH10n05979 LinkIcon - -
-
ATH14n06979 LinkIcon - -
-
ATH14n06982 LinkIcon - -
-
ATH14n07845 LinkIcon - -
-
ATH14n07848 LinkIcon - -
-
ATH56n09451 LinkIcon - -
-
ATH56n09701 LinkIcon - -
-
ATH56n09951 LinkIcon - -
-
ATH57n09644 LinkIcon - -
-
ATH57n10140 LinkIcon - -
-
ATH58n09583 LinkIcon - -
-
ATH58n10090 LinkIcon - -
-
ATH59n09594 LinkIcon - -
-
ATH59n10322 LinkIcon - -
-
ATH60n09012 LinkIcon - -
-
ATH60n09476 LinkIcon - -
-
ATH60n09715 LinkIcon - -
-
ATH60n09961 LinkIcon - -
-
ATH61n08512 LinkIcon - -
-
ATH62n08586 LinkIcon - -
-
ATH62n09526 LinkIcon - -
-
ATH64n08705 LinkIcon - -
-
ATH64n08709 LinkIcon - -
-
ATH64n09431 LinkIcon - -
-
ATH64n09435 LinkIcon - -
-
5 adp023743 LinkIcon Positive ATH14p10477 LinkIcon PT112170 LinkIcon 0.996
Delphinidin-3-O-beta-glucopyranoside; MS2; Q-Tof; [M+H]+
   Delphinidin-3-O-beta-glucopyranoside
  Dp 3-Glc
  Myrtillin
  Delphinidin-3-glucoside
  (2S,3R,4S,5S,6R)-2-[5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)chromenylium-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
ATH14p10043 LinkIcon PM018158 LinkIcon 0.995
Quercetin-3-glucoside-7-hexoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-3-glucoside-7-hexoside
ATH13p10995 LinkIcon PM018158 LinkIcon 0.994
Quercetin-3-glucoside-7-hexoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-3-glucoside-7-hexoside
ATH13p11569 LinkIcon PT112190 LinkIcon 0.992
Quercetin-3,4'-O-di-beta-glucopyranoside; MS2; Q-Tof; [M]+
   Quercetin-3,4'-O-di-beta-glucopyranoside
  Que 3,4'-di-Glc
  Quercetin 3,4'-diglucoside
  5,7-dihydroxy-2-[3-hydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
ATH08p09950 LinkIcon PT112190 LinkIcon 0.984
Quercetin-3,4'-O-di-beta-glucopyranoside; MS2; Q-Tof; [M]+
   Quercetin-3,4'-O-di-beta-glucopyranoside
  Que 3,4'-di-Glc
  Quercetin 3,4'-diglucoside
  5,7-dihydroxy-2-[3-hydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
ATH64p12146 LinkIcon PM018158 LinkIcon 0.979
Quercetin-3-glucoside-7-hexoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-3-glucoside-7-hexoside
ATH64p12789 LinkIcon PM018158 LinkIcon 0.976
Quercetin-3-glucoside-7-hexoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-3-glucoside-7-hexoside
ATH63p12569 LinkIcon PM018158 LinkIcon 0.968
Quercetin-3-glucoside-7-hexoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-3-glucoside-7-hexoside
ATH63p13537 LinkIcon PT112190 LinkIcon 0.964
Quercetin-3,4'-O-di-beta-glucopyranoside; MS2; Q-Tof; [M]+
   Quercetin-3,4'-O-di-beta-glucopyranoside
  Que 3,4'-di-Glc
  Quercetin 3,4'-diglucoside
  5,7-dihydroxy-2-[3-hydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
ATH11p09328 LinkIcon PM018168 LinkIcon 0.956
Quercetin-trihexoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-trihexoside
ATH58p12021 LinkIcon PM018158 LinkIcon 0.956
Quercetin-3-glucoside-7-hexoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-3-glucoside-7-hexoside
ATH08p10488 LinkIcon PT112190 LinkIcon 0.945
Quercetin-3,4'-O-di-beta-glucopyranoside; MS2; Q-Tof; [M]+
   Quercetin-3,4'-O-di-beta-glucopyranoside
  Que 3,4'-di-Glc
  Quercetin 3,4'-diglucoside
  5,7-dihydroxy-2-[3-hydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
ATH61p11591 LinkIcon PT112190 LinkIcon 0.937
Quercetin-3,4'-O-di-beta-glucopyranoside; MS2; Q-Tof; [M]+
   Quercetin-3,4'-O-di-beta-glucopyranoside
  Que 3,4'-di-Glc
  Quercetin 3,4'-diglucoside
  5,7-dihydroxy-2-[3-hydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
ATH58p12241 LinkIcon PM018168 LinkIcon 0.905
Quercetin-trihexoside; MS2; Q-TOF; M+H; 15->55V
   Quercetin-trihexoside
ATH56p10294 LinkIcon PT112190 LinkIcon 0.904
Quercetin-3,4'-O-di-beta-glucopyranoside; MS2; Q-Tof; [M]+
   Quercetin-3,4'-O-di-beta-glucopyranoside
  Que 3,4'-di-Glc
  Quercetin 3,4'-diglucoside
  5,7-dihydroxy-2-[3-hydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
ATH56p11085 LinkIcon - -
-
ATH56p11345 LinkIcon - -
-
ATH57p10387 LinkIcon - -
-
ATH61p12652 LinkIcon - -
-
ATH63p10927 LinkIcon - -
-
ATH64p13213 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at2g29740
UDP-glucosyl transferase 71C2 - UDP-glucosyl transferase 71C2 (UGT71C2); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, quercetin 3'-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 71C1 (TAIR:AT2G29750.1); Has 7391 Blast hits to 7346 proteins in 369 species: Archae - 0; Bacteria - 193; Metazoa - 2136; Fungi - 25; Plants - 4947; Viruses - 29; Other Eukaryotes - 61 (source: NCBI BLink).
2
at5g01040
laccase 8 putative laccase, knockout mutant showed early flowering laccase 8 (LAC8); FUNCTIONS IN: laccase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, response to copper ion; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: fruit, root, flower; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT5G01050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
3
at5g01050
Laccase/Diphenol oxidase family protein putative laccase, a member of laccase family of genes (17 members in Arabidopsis). Laccase/Diphenol oxidase family protein; FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: root, flower; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 8 (TAIR:AT5G01040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
4
at5g25810
Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family (TINY). The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic or overexpression of this gene in a Ds tagged line has reduced cell expansion. The expression of this gene is induced by ethylene and light and appears to stimulate cytokinin biosynthesis. TINY (tny); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G11590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit