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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
 Highlight filters
Keyword
Polarity
Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 2 " Y:" 17 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn044910 LinkIcon Negative ATH08n10793 LinkIcon - -
-
ATH08n10797 LinkIcon - -
-
ATH58n11741 LinkIcon - -
-
ATH58n12759 LinkIcon - -
-
2 adn059501 LinkIcon Negative ATH06n08517 LinkIcon - -
-
ATH06n08520 LinkIcon - -
-
ATH06n09145 LinkIcon - -
-
ATH06n09148 LinkIcon - -
-
ATH07n09972 LinkIcon - -
-
ATH07n09975 LinkIcon - -
-
ATH07n10627 LinkIcon - -
-
ATH07n10630 LinkIcon - -
-
ATH08n12155 LinkIcon - -
-
ATH08n12158 LinkIcon - -
-
ATH08n12808 LinkIcon - -
-
ATH08n12811 LinkIcon - -
-
ATH09n12197 LinkIcon - -
-
ATH09n12199 LinkIcon - -
-
ATH09n12778 LinkIcon - -
-
ATH09n12781 LinkIcon - -
-
ATH10n09380 LinkIcon - -
-
ATH10n09382 LinkIcon - -
-
ATH10n10001 LinkIcon - -
-
ATH10n10003 LinkIcon - -
-
ATH11n07547 LinkIcon - -
-
ATH11n07668 LinkIcon - -
-
ATH11n07669 LinkIcon - -
-
ATH11n07860 LinkIcon - -
-
ATH11n07976 LinkIcon - -
-
ATH13n11533 LinkIcon - -
-
ATH14n10938 LinkIcon - -
-
ATH14n11246 LinkIcon - -
-
ATH56n14253 LinkIcon - -
-
ATH56n14256 LinkIcon - -
-
ATH56n14919 LinkIcon - -
-
ATH56n14922 LinkIcon - -
-
ATH57n14299 LinkIcon - -
-
ATH57n14302 LinkIcon - -
-
ATH57n15059 LinkIcon - -
-
ATH57n15062 LinkIcon - -
-
ATH58n14550 LinkIcon - -
-
ATH58n14553 LinkIcon - -
-
ATH58n15298 LinkIcon - -
-
ATH58n15301 LinkIcon - -
-
ATH59n14116 LinkIcon - -
-
ATH59n14119 LinkIcon - -
-
ATH59n14800 LinkIcon - -
-
ATH59n14803 LinkIcon - -
-
ATH60n13979 LinkIcon - -
-
ATH60n13982 LinkIcon - -
-
ATH60n14742 LinkIcon - -
-
ATH60n14745 LinkIcon - -
-
ATH61n13126 LinkIcon - -
-
ATH61n13129 LinkIcon - -
-
ATH61n13888 LinkIcon - -
-
ATH61n13891 LinkIcon - -
-
ATH62n13343 LinkIcon - -
-
ATH62n14085 LinkIcon - -
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ATH62n14337 LinkIcon - -
-
ATH63n14256 LinkIcon - -
-
ATH63n14508 LinkIcon - -
-
ATH64n13368 LinkIcon - -
-
ATH64n13819 LinkIcon - -
-
3 adn059503 LinkIcon Negative ATH06n08520 LinkIcon - -
-
ATH06n09148 LinkIcon - -
-
ATH07n09978 LinkIcon - -
-
ATH07n10633 LinkIcon - -
-
ATH08n12158 LinkIcon - -
-
ATH09n12432 LinkIcon - -
-
ATH10n09385 LinkIcon - -
-
ATH10n09838 LinkIcon - -
-
ATH10n10004 LinkIcon - -
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ATH11n07668 LinkIcon - -
-
ATH11n07669 LinkIcon - -
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ATH11n07976 LinkIcon - -
-
ATH14n10743 LinkIcon - -
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ATH14n11109 LinkIcon - -
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ATH14n11476 LinkIcon - -
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ATH56n14259 LinkIcon - -
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ATH56n14922 LinkIcon - -
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ATH57n14302 LinkIcon - -
-
ATH57n14305 LinkIcon - -
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ATH57n15065 LinkIcon - -
-
ATH58n14556 LinkIcon - -
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ATH58n15304 LinkIcon - -
-
ATH59n14119 LinkIcon - -
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ATH59n14121 LinkIcon - -
-
ATH59n14806 LinkIcon - -
-
ATH60n13982 LinkIcon - -
-
ATH60n13985 LinkIcon - -
-
ATH60n14748 LinkIcon - -
-
ATH60n15005 LinkIcon - -
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ATH61n13129 LinkIcon - -
-
ATH61n13891 LinkIcon - -
-
ATH62n13346 LinkIcon - -
-
ATH62n14085 LinkIcon - -
-
ATH63n14256 LinkIcon - -
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ATH63n14260 LinkIcon - -
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ATH64n13617 LinkIcon - -
-
ATH64n14023 LinkIcon - -
-
4 adn064320 LinkIcon Negative ATH57n16372 LinkIcon PS093107 LinkIcon 0.943
Quercetin-3-Galactoside-6''-Rhamnoside-3'''-Rhamnoside; MS2; QqQ; negative; CE 10 V
   Quercetin-3-Galactoside-6''-Rhamnoside-3'''-Rhamnoside
  Quer-3-Gal-6''-Rha-3'''-Rha
ATH14n12186 LinkIcon PM018039 LinkIcon 0.924
Isorhamnetin-3-rhamnosylglucoside-7-glucoside; MS2; Q-TOF; M-H; 15->55V
   Isorhamnetin-3-rhamnosylglucoside-7-glucoside
ATH06n09948 LinkIcon - -
-
ATH07n11282 LinkIcon - -
-
ATH08n13400 LinkIcon - -
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ATH08n13403 LinkIcon - -
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ATH09n13756 LinkIcon - -
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ATH10n10830 LinkIcon - -
-
ATH11n08296 LinkIcon - -
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ATH56n15925 LinkIcon - -
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ATH56n15928 LinkIcon - -
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ATH58n16341 LinkIcon - -
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ATH59n15839 LinkIcon - -
-
ATH60n15788 LinkIcon - -
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ATH64n14692 LinkIcon - -
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5 adn098202 LinkIcon Negative ATH56n18646 LinkIcon - -
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ATH57n18890 LinkIcon - -
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ATH58n18991 LinkIcon - -
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ATH59n18490 LinkIcon - -
-
ATH59n18690 LinkIcon - -
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ATH61n17491 LinkIcon - -
-
6 adn120407 LinkIcon Negative ATH56n19115 LinkIcon - -
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ATH56n19118 LinkIcon - -
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ATH57n19498 LinkIcon - -
-
ATH57n19881 LinkIcon - -
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ATH58n19680 LinkIcon - -
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ATH59n19067 LinkIcon - -
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ATH59n19070 LinkIcon - -
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ATH60n18966 LinkIcon - -
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ATH60n19149 LinkIcon - -
-
ATH61n18405 LinkIcon - -
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7 adp001208 LinkIcon Positive ATH09p00593 LinkIcon - -
-
ATH09p01357 LinkIcon - -
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ATH10p00586 LinkIcon - -
-
ATH11p00330 LinkIcon - -
-
ATH14p01353 LinkIcon - -
-
ATH56p01391 LinkIcon - -
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ATH59p00598 LinkIcon - -
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ATH61p01648 LinkIcon - -
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ATH61p02981 LinkIcon - -
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ATH63p00602 LinkIcon - -
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ATH64p00597 LinkIcon - -
-
ATH64p01115 LinkIcon - -
-
8 adp009571 LinkIcon Positive ATH06p05664 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g14130
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G14120.1); Has 6919 Blast hits to 6851 proteins in 822 species: Archae - 0; Bacteria - 798; Metazoa - 89; Fungi - 567; Plants - 4661; Viruses - 0; Other Eukaryotes - 804 (source: NCBI BLink).
2
at2g20880
Integrase-type DNA-binding superfamily protein - Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G28140.1); Has 5938 Blast hits to 5739 proteins in 258 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2; Plants - 5899; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink).
3
at2g23150
natural resistance-associated macrophage protein 3 Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination. natural resistance-associated macrophage protein 3 (NRAMP3); FUNCTIONS IN: manganese ion transmembrane transporter activity, inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: in 10 processes; LOCATED IN: vacuolar membrane, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: natural resistance associated macrophage protein 4 (TAIR:AT5G67330.1); Has 4997 Blast hits to 4957 proteins in 1529 species: Archae - 118; Bacteria - 3577; Metazoa - 372; Fungi - 260; Plants - 341; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink).
4
at2g24850
tyrosine aminotransferase 3 Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid. tyrosine aminotransferase 3 (TAT3); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT2G20610.1); Has 40308 Blast hits to 40304 proteins in 3024 species: Archae - 944; Bacteria - 29187; Metazoa - 746; Fungi - 752; Plants - 1298; Viruses - 0; Other Eukaryotes - 7381 (source: NCBI BLink).
5
at2g37760
NAD(P)-linked oxidoreductase superfamily protein - NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37790.1); Has 25671 Blast hits to 25646 proteins in 2485 species: Archae - 414; Bacteria - 17274; Metazoa - 2121; Fungi - 1833; Plants - 1216; Viruses - 0; Other Eukaryotes - 2813 (source: NCBI BLink).
6
at3g58060
Cation efflux family protein - Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.2); Has 4333 Blast hits to 4329 proteins in 1671 species: Archae - 143; Bacteria - 3530; Metazoa - 46; Fungi - 247; Plants - 204; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink).
7
at3g62960
Thioredoxin superfamily protein - Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT2G47880.1); Has 1273 Blast hits to 1269 proteins in 241 species: Archae - 0; Bacteria - 97; Metazoa - 238; Fungi - 134; Plants - 731; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
8
at4g33540
metallo-beta-lactamase family protein - metallo-beta-lactamase family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: response to arsenic, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); Has 1592 Blast hits to 1592 proteins in 436 species: Archae - 145; Bacteria - 835; Metazoa - 30; Fungi - 10; Plants - 78; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink).
9
at5g28030
L-cysteine desulfhydrase 1 - L-cysteine desulfhydrase 1 (DES1); FUNCTIONS IN: pyridoxal phosphate binding, cysteine synthase activity, catalytic activity; INVOLVED IN: cysteine biosynthetic process from serine, cysteine biosynthetic process, metabolic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: cysteine synthase D2 (TAIR:AT5G28020.6); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
10
at5g52810
NAD(P)-binding Rossmann-fold superfamily protein - NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: structural constituent of eye lens, binding, catalytic activity; INVOLVED IN: arginine catabolic process to glutamate, nopaline catabolic process, metabolic process, octopine catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Ornithine cyclodeaminase/mu-crystallin (InterPro:IPR003462); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit