Home Gene search Metabolite search PRIMe
 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
 Highlight filters
Keyword
Polarity
Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 6 " Y:" 0 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn033079 LinkIcon Negative ATH11n03351 LinkIcon PM018004 LinkIcon 1.000
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH57n07617 LinkIcon PM018004 LinkIcon 0.972
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH60n07472 LinkIcon PM018004 LinkIcon 0.966
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH13n06013 LinkIcon PM018004 LinkIcon 0.965
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH09n06736 LinkIcon PM018004 LinkIcon 0.960
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH63n07207 LinkIcon PM018004 LinkIcon 0.956
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH60n08205 LinkIcon PM018004 LinkIcon 0.952
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH57n08363 LinkIcon PM018004 LinkIcon 0.951
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH13n06682 LinkIcon PM018004 LinkIcon 0.950
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH59n08791 LinkIcon PM018004 LinkIcon 0.942
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH63n08213 LinkIcon PM018004 LinkIcon 0.930
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH59n07554 LinkIcon PM018004 LinkIcon 0.928
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH08n07262 LinkIcon PM018004 LinkIcon 0.912
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH13n06426 LinkIcon PM018004 LinkIcon 0.912
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH11n04000 LinkIcon PM018004 LinkIcon 0.910
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH63n06949 LinkIcon PS107910 LinkIcon 0.907
Gluconasturtiin; MS2; QqQ; negative; CE 40 V
   Gluconasturtiin
  Gluconasturcin
  2-Phenethylglucosinolate
ATH64n07190 LinkIcon PS020909 LinkIcon 0.907
D-Glucose-6-phosphate sodium salt ; MS2; QqQ; negative; CE 30 V
   D-Glucose-6-phosphate sodium salt
  G6P
  Glc-6P
  D(+)-Glucopyranose 6-phosphate sodium salt
  Robison ester
ATH13n05758 LinkIcon PM018004 LinkIcon 0.901
6-Methylthio-n-hexyl glucosinolate; MS2; Q-TOF; M-H; 15->55V
   6-Methylthio-n-hexyl glucosinolate
  glucolesquerellin
ATH63n08210 LinkIcon PS107910 LinkIcon 0.900
Gluconasturtiin; MS2; QqQ; negative; CE 40 V
   Gluconasturtiin
  Gluconasturcin
  2-Phenethylglucosinolate
ATH06n04132 LinkIcon - -
-
ATH09n07832 LinkIcon - -
-
ATH10n04384 LinkIcon - -
-
ATH56n08115 LinkIcon - -
-
ATH58n07982 LinkIcon - -
-
ATH62n08279 LinkIcon - -
-
ATH64n07698 LinkIcon - -
-
ATH64n08407 LinkIcon - -
-
2 adn039850 LinkIcon Negative ATH11n04910 LinkIcon PM014504 LinkIcon 0.905
Dimethyl lithospermate; MS2; QIT; M-H; 20->50%
   Dimethyl lithospermate
ATH06n06254 LinkIcon - -
-
ATH08n08626 LinkIcon - -
-
ATH09n09318 LinkIcon - -
-
ATH10n05935 LinkIcon - -
-
ATH11n04913 LinkIcon - -
-
ATH11n05421 LinkIcon - -
-
ATH11n05726 LinkIcon - -
-
ATH13n08684 LinkIcon - -
-
ATH13n08689 LinkIcon - -
-
ATH14n07803 LinkIcon - -
-
ATH14n07981 LinkIcon - -
-
ATH14n08141 LinkIcon - -
-
ATH14n08542 LinkIcon - -
-
ATH56n10415 LinkIcon - -
-
ATH56n10658 LinkIcon - -
-
ATH58n10047 LinkIcon - -
-
ATH58n10804 LinkIcon - -
-
ATH61n08907 LinkIcon - -
-
ATH61n09571 LinkIcon - -
-
ATH62n09253 LinkIcon - -
-
ATH62n09256 LinkIcon - -
-
ATH62n10124 LinkIcon - -
-
ATH62n10127 LinkIcon - -
-
ATH63n09745 LinkIcon - -
-
ATH63n09989 LinkIcon - -
-
ATH64n09650 LinkIcon - -
-
ATH64n09863 LinkIcon - -
-
ATH64n10292 LinkIcon - -
-
ATH64n10518 LinkIcon - -
-
3 adn046520 LinkIcon Negative ATH14n09123 LinkIcon - -
-
ATH57n11789 LinkIcon - -
-
ATH59n11715 LinkIcon - -
-
ATH63n11266 LinkIcon - -
-
ATH63n11270 LinkIcon - -
-
4 adp018928 LinkIcon Positive ATH06p08413 LinkIcon - -
-
ATH08p08444 LinkIcon - -
-
ATH12p07867 LinkIcon - -
-
ATH13p10062 LinkIcon - -
-
ATH13p10065 LinkIcon - -
-
ATH14p09345 LinkIcon - -
-
ATH56p08563 LinkIcon - -
-
ATH58p10667 LinkIcon - -
-
ATH62p08224 LinkIcon - -
-
ATH63p10357 LinkIcon - -
-
5 adp021954 LinkIcon Positive ATH14p10065 LinkIcon PT104630 LinkIcon 0.999
Kaempferol-3-O-beta-D-glucoside-7-O-alpha-L-rhamnoside; MS2; Q-Tof; [M+H]+
   Kaempferol-3-O-beta-D-glucoside-7-O-alpha-L-rhamnoside
  Kaem-3-Glc-7-Rha
  Kaempferol-3-glucoside-7-rhamnoside
ATH07p08708 LinkIcon PS040401 LinkIcon 0.995
Luteolin; MS2; QqQ; positive; CE 10 V
   Luteolin
  Lutl
  3',4',5,7-tetrahydroxyflavone
  Digitoflavone
  Flacitran
  Luteolol
  Weld Lake
  Yama kariyasu
  4H-1-Benzopyran-4-one, 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-
  Cyanidenon 1470
ATH12p08520 LinkIcon PS040401 LinkIcon 0.995
Luteolin; MS2; QqQ; positive; CE 10 V
   Luteolin
  Lutl
  3',4',5,7-tetrahydroxyflavone
  Digitoflavone
  Flacitran
  Luteolol
  Weld Lake
  Yama kariyasu
  4H-1-Benzopyran-4-one, 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-
  Cyanidenon 1470
ATH12p08841 LinkIcon PM018144 LinkIcon 0.990
Kaempferol-3-arabinoside-7-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Kaempferol-3-arabinoside-7-rhamnoside
ATH14p09809 LinkIcon PT111760 LinkIcon 0.990
Kaempferol-3-O-b-glucopyranosyl-7-O-a-rhamnopyranoside; MS2; Q-Tof; [M+H]+
   Kaempferol-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside
  Kaem-3-Glc-7-Rha
  Kaempferol-3-glucoside-7-rhamnoside
ATH12p08460 LinkIcon PT111760 LinkIcon 0.988
Kaempferol-3-O-b-glucopyranosyl-7-O-a-rhamnopyranoside; MS2; Q-Tof; [M+H]+
   Kaempferol-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside
  Kaem-3-Glc-7-Rha
  Kaempferol-3-glucoside-7-rhamnoside
ATH08p09732 LinkIcon PM018139 LinkIcon 0.981
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH08p09597 LinkIcon PM018148 LinkIcon 0.980
Kaempferol-3-O-b-glucoside-7-O-a-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Kaempferol-3-O-b-glucoside-7-O-a-rhamnoside
ATH08p09970 LinkIcon PM018148 LinkIcon 0.979
Kaempferol-3-O-b-glucoside-7-O-a-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Kaempferol-3-O-b-glucoside-7-O-a-rhamnoside
ATH11p08970 LinkIcon PM007101 LinkIcon 0.979
Cyanidin 3-O-galactosyl-rhamnoside; MS2; QIT; M+H; 30%
   Cyanidin 3-O-galactosyl-rhamnoside
ATH08p09226 LinkIcon PM018139 LinkIcon 0.976
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH13p11019 LinkIcon PT111690 LinkIcon 0.973
Quercetin-3,7-O-alpha-L-dirhamnopyranoside; MS2; Q-Tof; [M+H]+
   Quercetin-3,7-O-alpha-L-dirhamnopyranoside
  Quer-3-Rha-7-Rha
  Quercetin-3-rhamnoside-7-rhamnoside
ATH06p08864 LinkIcon PM018135 LinkIcon 0.972
Isorhamnetin-3-arabinoside-7-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-arabinoside-7-rhamnoside
ATH12p08237 LinkIcon PT111760 LinkIcon 0.971
Kaempferol-3-O-b-glucopyranosyl-7-O-a-rhamnopyranoside; MS2; Q-Tof; [M+H]+
   Kaempferol-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside
  Kaem-3-Glc-7-Rha
  Kaempferol-3-glucoside-7-rhamnoside
ATH64p12168 LinkIcon PT111760 LinkIcon 0.971
Kaempferol-3-O-b-glucopyranosyl-7-O-a-rhamnopyranoside; MS2; Q-Tof; [M+H]+
   Kaempferol-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside
  Kaem-3-Glc-7-Rha
  Kaempferol-3-glucoside-7-rhamnoside
ATH62p09186 LinkIcon PT111760 LinkIcon 0.970
Kaempferol-3-O-b-glucopyranosyl-7-O-a-rhamnopyranoside; MS2; Q-Tof; [M+H]+
   Kaempferol-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside
  Kaem-3-Glc-7-Rha
  Kaempferol-3-glucoside-7-rhamnoside
ATH56p10050 LinkIcon PM018152 LinkIcon 0.969
Kaempferol-hexoside; MS2; Q-TOF; M+H; 15->55V
   Kaempferol-hexoside
ATH56p10046 LinkIcon PM018139 LinkIcon 0.968
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH64p12609 LinkIcon PT109200 LinkIcon 0.968
Kaempferol-3-Glucoside-3-Rhamnoside; MS2; Q-Tof; [M+H]+
   Kaempferol-3-Glucoside-3''-Rhamnoside
  Kaem-3-Glc-3''-Rha
  Kaempferol-3-rungioside
ATH58p12047 LinkIcon PM018148 LinkIcon 0.964
Kaempferol-3-O-b-glucoside-7-O-a-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Kaempferol-3-O-b-glucoside-7-O-a-rhamnoside
ATH13p10421 LinkIcon PT111690 LinkIcon 0.963
Quercetin-3,7-O-alpha-L-dirhamnopyranoside; MS2; Q-Tof; [M+H]+
   Quercetin-3,7-O-alpha-L-dirhamnopyranoside
  Quer-3-Rha-7-Rha
  Quercetin-3-rhamnoside-7-rhamnoside
ATH14p10368 LinkIcon PT104160 LinkIcon 0.961
Keracyanin Chloride; MS2; Q-Tof; [M]+
   Keracyanin Chloride
  Cynd-Rut
  cyanidin-3-O-rutinoside
  Rutinosyl-3-cyanidine
  cyaninoside
  Cyanidin 3-O-rhamnosylglucoside
  Cyanidin 3-rhamnoglucoside
  (2S,3R,4S,5S,6R)-2-[2-(3,4-dihydroxyphenyl)-5,7-dihydroxychromenylium-3-yl]oxy-6-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxane-3,4,5-triol
ATH62p08662 LinkIcon PS085104 LinkIcon 0.956
kaempferol-7-O-neohesperidoside; MS2; QqQ; positive; CE 40 V
   kaempferol-7-O-neohesperidoside
  Kaem-7-Glc-2pp-Man
ATH58p11136 LinkIcon PM018148 LinkIcon 0.950
Kaempferol-3-O-b-glucoside-7-O-a-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Kaempferol-3-O-b-glucoside-7-O-a-rhamnoside
ATH06p09278 LinkIcon PM018139 LinkIcon 0.949
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH63p11847 LinkIcon PT111690 LinkIcon 0.946
Quercetin-3,7-O-alpha-L-dirhamnopyranoside; MS2; Q-Tof; [M+H]+
   Quercetin-3,7-O-alpha-L-dirhamnopyranoside
  Quer-3-Rha-7-Rha
  Quercetin-3-rhamnoside-7-rhamnoside
ATH63p12591 LinkIcon PT111690 LinkIcon 0.936
Quercetin-3,7-O-alpha-L-dirhamnopyranoside; MS2; Q-Tof; [M+H]+
   Quercetin-3,7-O-alpha-L-dirhamnopyranoside
  Quer-3-Rha-7-Rha
  Quercetin-3-rhamnoside-7-rhamnoside
ATH07p08317 LinkIcon PT104160 LinkIcon 0.928
Keracyanin Chloride; MS2; Q-Tof; [M]+
   Keracyanin Chloride
  Cynd-Rut
  cyanidin-3-O-rutinoside
  Rutinosyl-3-cyanidine
  cyaninoside
  Cyanidin 3-O-rhamnosylglucoside
  Cyanidin 3-rhamnoglucoside
  (2S,3R,4S,5S,6R)-2-[2-(3,4-dihydroxyphenyl)-5,7-dihydroxychromenylium-3-yl]oxy-6-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxane-3,4,5-triol
ATH58p10865 LinkIcon PM018139 LinkIcon 0.926
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH61p11085 LinkIcon PM018135 LinkIcon 0.922
Isorhamnetin-3-arabinoside-7-rhamnoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-arabinoside-7-rhamnoside
ATH58p11563 LinkIcon PM018139 LinkIcon 0.921
Isorhamnetin-3-rhamnoside-7-glucoside; MS2; Q-TOF; M+H; 15->55V
   Isorhamnetin-3-rhamnoside-7-glucoside
ATH63p12342 LinkIcon PT111690 LinkIcon 0.917
Quercetin-3,7-O-alpha-L-dirhamnopyranoside; MS2; Q-Tof; [M+H]+
   Quercetin-3,7-O-alpha-L-dirhamnopyranoside
  Quer-3-Rha-7-Rha
  Quercetin-3-rhamnoside-7-rhamnoside
ATH10p07844 LinkIcon - -
-
ATH11p09437 LinkIcon - -
-
ATH56p09250 LinkIcon - -
-
ATH57p09347 LinkIcon - -
-
ATH59p09097 LinkIcon - -
-
ATH61p11614 LinkIcon - -
-
ATH63p12594 LinkIcon - -
-
ATH64p11507 LinkIcon - -
-
ATH64p11968 LinkIcon - -
-
6 adp025422 LinkIcon Positive ATH10p08727 LinkIcon PS022802 LinkIcon 0.942
Etidronic acid; MS2; QqQ; positive; CE 20 V
   Etidronic acid
  HEDPA
  HEDP
  EHDP
  1-Hydroxyethane-1,1-diphosphonic Acid
  1-Hydroxyethylidenediphosphonic acid
  1,1,1-Ethanetriol diphosphonate
  Turpinal SL
ATH06p10500 LinkIcon PS015602 LinkIcon 0.902
Sinapic acid; MS2; QqQ; positive; CE 20 V
   Sinapic acid
  SA
  Sin
  Sinapate
  Sinapinic acid
  3,5-dimethoxy-4-hydroxycinnamic acid
  4-Hydroxy-3,5-dimethoxy-cinnamic acid
ATH09p09898 LinkIcon - -
-
ATH11p10232 LinkIcon - -
-
ATH14p10803 LinkIcon - -
-
ATH14p11209 LinkIcon - -
-
ATH56p10845 LinkIcon - -
-
ATH56p12149 LinkIcon - -
-
ATH57p10416 LinkIcon - -
-
ATH58p12271 LinkIcon - -
-
ATH59p10828 LinkIcon - -
-
ATH63p14020 LinkIcon - -
-
ATH63p14265 LinkIcon - -
-
ATH64p12821 LinkIcon - -
-
ATH64p13239 LinkIcon - -
-
ATH64p13432 LinkIcon - -
-
7 adp041654 LinkIcon Positive ATH61p17206 LinkIcon - -
-
ATH63p18631 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g60740
Thioredoxin superfamily protein - Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 2 (TAIR:AT1G65970.1); Has 4009 Blast hits to 4009 proteins in 876 species: Archae - 11; Bacteria - 1529; Metazoa - 175; Fungi - 308; Plants - 243; Viruses - 0; Other Eukaryotes - 1743 (source: NCBI BLink).
2
at1g60750
NAD(P)-linked oxidoreductase superfamily protein - NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1); Has 31420 Blast hits to 31397 proteins in 2613 species: Archae - 665; Bacteria - 20768; Metazoa - 1940; Fungi - 2451; Plants - 1336; Viruses - 0; Other Eukaryotes - 4260 (source: NCBI BLink).
3
at1g65970
thioredoxin-dependent peroxidase 2 thioredoxin-dependent peroxidase 2 thioredoxin-dependent peroxidase 2 (TPX2); FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G60740.1); Has 3995 Blast hits to 3995 proteins in 874 species: Archae - 11; Bacteria - 1524; Metazoa - 175; Fungi - 308; Plants - 235; Viruses - 0; Other Eukaryotes - 1742 (source: NCBI BLink).
4
at2g24260
LJRHL1-like 1 Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3). LJRHL1-like 1 (LRL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root hair cell development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: LJRHL1-like 2 (TAIR:AT4G30980.1); Has 3384 Blast hits to 3378 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 13; Plants - 3219; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
5
at3g03520
non-specific phospholipase C3 Lysophosphatidic acid phosphatase highly expressed during phosphate starvation and abiotic stresses. Role in lipid synthesis. non-specific phospholipase C3 (NPC3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, Lysophosphatidic acid phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, phosphate metabolic process, response to abiotic stimulus; LOCATED IN: vacuole, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C4 (TAIR:AT3G03530.1); Has 2235 Blast hits to 2112 proteins in 404 species: Archae - 32; Bacteria - 1866; Metazoa - 0; Fungi - 127; Plants - 159; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).
6
at3g57020
Calcium-dependent phosphotriesterase superfamily protein - Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G57010.1); Has 1029 Blast hits to 1017 proteins in 197 species: Archae - 1; Bacteria - 199; Metazoa - 238; Fungi - 6; Plants - 476; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink).
7
at4g11310
Papain family cysteine protease cysteine proteinase precursor-like protein Papain family cysteine protease; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, N-terminal protein myristoylation; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT4G11320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
8
at4g11320
Papain family cysteine protease - Papain family cysteine protease; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain (InterPro:IPR013128), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT4G11310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
9
at4g23050
PAS domain-containing protein tyrosine kinase family protein - PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity, signal transducer activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT3G06640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
10
at4g32650
potassium channel in Arabidopsis thaliana 3 Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). potassium channel in Arabidopsis thaliana 3 (KAT3); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Cyclic nucleotide-binding-like (InterPro:IPR018490), Ion transport (InterPro:IPR005821), RmlC-like jelly roll fold (InterPro:IPR014710), Protein of unknown function DUF3354 (InterPro:IPR021789); BEST Arabidopsis thaliana protein match is: K+ transporter 1 (TAIR:AT2G26650.1); Has 6655 Blast hits to 6394 proteins in 956 species: Archae - 41; Bacteria - 1615; Metazoa - 2020; Fungi - 86; Plants - 876; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink).
11
at5g06839
bZIP transcription factor family protein - bZIP transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: leaf whorl, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT1G08320.3); Has 904 Blast hits to 903 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 2; Plants - 802; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
12
at5g25450
Cytochrome bd ubiquinol oxidase, 14kDa subunit - Cytochrome bd ubiquinol oxidase, 14kDa subunit; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome d ubiquinol oxidase, 14kDa subunit (InterPro:IPR003197); BEST Arabidopsis thaliana protein match is: Cytochrome bd ubiquinol oxidase, 14kDa subunit (TAIR:AT4G32470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

Creative Commons License
RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit