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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Polarity
Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 7 " Y:" 21 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn024939 LinkIcon Negative ATH10n03074 LinkIcon PS006008 LinkIcon 0.950
Sucrose; MS2; QqQ; negative; CE 20 V
   Sucrose
  Suc
  Fru(beta2-1alpha)Glc
  D-(+)-Saccharose
  Cane sugar
  alpha-D-Glucopyranosyl beta-D-fructofuranoside
  Microse
ATH09n05919 LinkIcon PS119108 LinkIcon 0.949
Galactinol Dihydrate; MS2; QqQ; negative; CE 20 V
   Galactinol Dihydrate
  Gla+myo-inositol
  6beta-Galactinol
  1-O-alpha-D-Galactosyl-D-myo-inositol
ATH09n04746 LinkIcon PS006008 LinkIcon 0.943
Sucrose; MS2; QqQ; negative; CE 20 V
   Sucrose
  Suc
  Fru(beta2-1alpha)Glc
  D-(+)-Saccharose
  Cane sugar
  alpha-D-Glucopyranosyl beta-D-fructofuranoside
  Microse
ATH60n06306 LinkIcon PS006008 LinkIcon 0.910
Sucrose; MS2; QqQ; negative; CE 20 V
   Sucrose
  Suc
  Fru(beta2-1alpha)Glc
  D-(+)-Saccharose
  Cane sugar
  alpha-D-Glucopyranosyl beta-D-fructofuranoside
  Microse
ATH06n02601 LinkIcon - -
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ATH06n02743 LinkIcon - -
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ATH07n02693 LinkIcon - -
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ATH07n03334 LinkIcon - -
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ATH08n04738 LinkIcon - -
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ATH08n05645 LinkIcon - -
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ATH10n02864 LinkIcon - -
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ATH11n02146 LinkIcon - -
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ATH11n02695 LinkIcon - -
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ATH12n01898 LinkIcon - -
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ATH12n01901 LinkIcon - -
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ATH12n02133 LinkIcon - -
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ATH12n02503 LinkIcon - -
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ATH13n04406 LinkIcon - -
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ATH13n04992 LinkIcon - -
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ATH14n04379 LinkIcon - -
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ATH14n04382 LinkIcon - -
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ATH14n04657 LinkIcon - -
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ATH14n05047 LinkIcon - -
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ATH56n05378 LinkIcon - -
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ATH56n05643 LinkIcon - -
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ATH56n06387 LinkIcon - -
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ATH57n05652 LinkIcon - -
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ATH57n06658 LinkIcon - -
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ATH58n05426 LinkIcon - -
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ATH58n06200 LinkIcon - -
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ATH59n05825 LinkIcon - -
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ATH59n06574 LinkIcon - -
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ATH59n06578 LinkIcon - -
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ATH60n05283 LinkIcon - -
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ATH60n05286 LinkIcon - -
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ATH60n06309 LinkIcon - -
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ATH61n04791 LinkIcon - -
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ATH61n05920 LinkIcon - -
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ATH62n05262 LinkIcon - -
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ATH62n05685 LinkIcon - -
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ATH63n04744 LinkIcon - -
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ATH63n05987 LinkIcon - -
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ATH64n05382 LinkIcon - -
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ATH64n05386 LinkIcon - -
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ATH64n06120 LinkIcon - -
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ATH64n06332 LinkIcon - -
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2 adn029723 LinkIcon Negative ATH10n03656 LinkIcon - -
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ATH10n04327 LinkIcon - -
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ATH11n02830 LinkIcon - -
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ATH12n02602 LinkIcon - -
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ATH14n05911 LinkIcon - -
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ATH56n07315 LinkIcon - -
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ATH57n07823 LinkIcon - -
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ATH59n07496 LinkIcon - -
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ATH61n06515 LinkIcon - -
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ATH62n06318 LinkIcon - -
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ATH62n07268 LinkIcon - -
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ATH62n07504 LinkIcon - -
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ATH64n06442 LinkIcon - -
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ATH64n06718 LinkIcon - -
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ATH64n07138 LinkIcon - -
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3 adp004083 LinkIcon Positive ATH14p02669 LinkIcon PS018501 LinkIcon 0.911
Creatinine,anhydrous; MS2; QqQ; positive; CE 10 V
   Creatinine,anhydrous
  2-Amino-1-methylimidazolidin-4-one
  2-Imino-1-methylimidazolidin-4-one
  2-Imino-N-methylhydantoin
  1-Methylglycocyamidine
  1-methylhydantoin-2-imide
  2-amino-1-methyl-4-imidazolidinone
ATH13p02659 LinkIcon PS018501 LinkIcon 0.909
Creatinine,anhydrous; MS2; QqQ; positive; CE 10 V
   Creatinine,anhydrous
  2-Amino-1-methylimidazolidin-4-one
  2-Imino-1-methylimidazolidin-4-one
  2-Imino-N-methylhydantoin
  1-Methylglycocyamidine
  1-methylhydantoin-2-imide
  2-amino-1-methyl-4-imidazolidinone
ATH06p01585 LinkIcon - -
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ATH06p01855 LinkIcon - -
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ATH06p02376 LinkIcon - -
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ATH07p02116 LinkIcon - -
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ATH07p02378 LinkIcon - -
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ATH08p01851 LinkIcon - -
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ATH08p02386 LinkIcon - -
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ATH09p01601 LinkIcon - -
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ATH09p02392 LinkIcon - -
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ATH10p01587 LinkIcon - -
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ATH10p02356 LinkIcon - -
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ATH11p01598 LinkIcon - -
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ATH11p01601 LinkIcon - -
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ATH11p02390 LinkIcon - -
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ATH12p01578 LinkIcon - -
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ATH12p02363 LinkIcon - -
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ATH13p01862 LinkIcon - -
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ATH13p02123 LinkIcon - -
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ATH13p02913 LinkIcon - -
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ATH14p02135 LinkIcon - -
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ATH56p01633 LinkIcon - -
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ATH56p02172 LinkIcon - -
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ATH56p02440 LinkIcon - -
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ATH56p02443 LinkIcon - -
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ATH57p01636 LinkIcon - -
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ATH57p02445 LinkIcon - -
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ATH58p01629 LinkIcon - -
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ATH58p01901 LinkIcon - -
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ATH58p02440 LinkIcon - -
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ATH59p01631 LinkIcon - -
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ATH59p01903 LinkIcon - -
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ATH59p02443 LinkIcon - -
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ATH61p03226 LinkIcon - -
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ATH61p04037 LinkIcon - -
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ATH62p01631 LinkIcon - -
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ATH62p01634 LinkIcon - -
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ATH62p02443 LinkIcon - -
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ATH63p01625 LinkIcon - -
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ATH63p01633 LinkIcon - -
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ATH63p01898 LinkIcon - -
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ATH63p02434 LinkIcon - -
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ATH63p02438 LinkIcon - -
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ATH63p02705 LinkIcon - -
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ATH64p01899 LinkIcon - -
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ATH64p02164 LinkIcon - -
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ATH64p02436 LinkIcon - -
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ATH64p02965 LinkIcon - -
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4 adp004710 LinkIcon Positive ATH13p02649 LinkIcon - -
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ATH13p03167 LinkIcon - -
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ATH13p03425 LinkIcon - -
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ATH14p02392 LinkIcon - -
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ATH14p03182 LinkIcon - -
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ATH63p02429 LinkIcon - -
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ATH63p03232 LinkIcon - -
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ATH63p03744 LinkIcon - -
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ATH64p02692 LinkIcon - -
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ATH64p02695 LinkIcon - -
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ATH64p03233 LinkIcon - -
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ATH64p03749 LinkIcon - -
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5 adp009818 LinkIcon Positive ATH06p04726 LinkIcon - -
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ATH06p05582 LinkIcon - -
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ATH07p04592 LinkIcon - -
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ATH07p05135 LinkIcon - -
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ATH08p05216 LinkIcon - -
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ATH08p05376 LinkIcon - -
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ATH08p05654 LinkIcon - -
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ATH09p04714 LinkIcon - -
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ATH09p04995 LinkIcon - -
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ATH09p05603 LinkIcon - -
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ATH10p05431 LinkIcon - -
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ATH11p04768 LinkIcon - -
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ATH11p05300 LinkIcon - -
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ATH11p05303 LinkIcon - -
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ATH12p04603 LinkIcon - -
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ATH12p04606 LinkIcon - -
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ATH12p05509 LinkIcon - -
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ATH13p06142 LinkIcon - -
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ATH14p05341 LinkIcon - -
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ATH14p05944 LinkIcon - -
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ATH14p06338 LinkIcon - -
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ATH56p04724 LinkIcon - -
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ATH56p04728 LinkIcon - -
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ATH56p05646 LinkIcon - -
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ATH57p04825 LinkIcon - -
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ATH57p04827 LinkIcon - -
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ATH57p05016 LinkIcon - -
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ATH57p05263 LinkIcon - -
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ATH58p05683 LinkIcon - -
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ATH58p06395 LinkIcon - -
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ATH59p05046 LinkIcon - -
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ATH59p05437 LinkIcon - -
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ATH61p06303 LinkIcon - -
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ATH61p06801 LinkIcon - -
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ATH61p07103 LinkIcon - -
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ATH62p04579 LinkIcon - -
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ATH62p05006 LinkIcon - -
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ATH63p04952 LinkIcon - -
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ATH63p05293 LinkIcon - -
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ATH63p05741 LinkIcon - -
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ATH63p05927 LinkIcon - -
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ATH63p06188 LinkIcon - -
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ATH64p05621 LinkIcon - -
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ATH64p06127 LinkIcon - -
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ATH64p06390 LinkIcon - -
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ATH64p06893 LinkIcon - -
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6 adp033825 LinkIcon Positive ATH08p11820 LinkIcon - -
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ATH10p09818 LinkIcon - -
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ATH11p11272 LinkIcon - -
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ATH14p12375 LinkIcon - -
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ATH58p15065 LinkIcon - -
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2. Gene information

No. ID Short description Curator summary Computational description
1
at1g07440
NAD(P)-binding Rossmann-fold superfamily protein - NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: response to cadmium ion, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD-dependent epimerase/dehydratase family protein (TAIR:AT2G29340.1); Has 123507 Blast hits to 123216 proteins in 3599 species: Archae - 988; Bacteria - 81523; Metazoa - 5145; Fungi - 6175; Plants - 2670; Viruses - 5; Other Eukaryotes - 27001 (source: NCBI BLink).
2
at1g26790
Dof-type zinc finger DNA-binding family protein - Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G69570.1); Has 1165 Blast hits to 1142 proteins in 80 species: Archae - 0; Bacteria - 20; Metazoa - 7; Fungi - 8; Plants - 1093; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
3
at1g72030
Acyl-CoA N-acyltransferases (NAT) superfamily protein - Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 189 Blast hits to 187 proteins in 53 species: Archae - 0; Bacteria - 63; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
4
at2g24280
alpha/beta-Hydrolases superfamily protein - alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity, serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, lysosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT5G65760.1); Has 1253 Blast hits to 1217 proteins in 170 species: Archae - 0; Bacteria - 7; Metazoa - 611; Fungi - 189; Plants - 249; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink).
5
at2g32010
CVP2 like 1 Encodes an inositol polyphosphate 5惻phosphatase (5PTase). Mediating phosphoinositide signaling. Involved in establishment of foliar vein patterns. CVP2 like 1 (CVL1); FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: leaf vascular tissue pattern formation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G05470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
6
at4g04770
ATP binding cassette protein 1 Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast. ATP binding cassette protein 1 (ABC1); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: cellular iron ion homeostasis, regulation of response to red or far red light, iron-sulfur cluster assembly; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufB (InterPro:IPR010231), SUF system FeS cluster assembly, SufBD (InterPro:IPR000825); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD superfamily protein (TAIR:AT5G44316.1); Has 12037 Blast hits to 11965 proteins in 1962 species: Archae - 330; Bacteria - 6550; Metazoa - 4; Fungi - 1; Plants - 99; Viruses - 0; Other Eukaryotes - 5053 (source: NCBI BLink).
7
at5g33280
Voltage-gated chloride channel family protein - Voltage-gated chloride channel family protein; FUNCTIONS IN: protein binding, anion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: intracellular, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel C (TAIR:AT5G49890.1); Has 6777 Blast hits to 6308 proteins in 1692 species: Archae - 118; Bacteria - 4354; Metazoa - 967; Fungi - 343; Plants - 345; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink).
8
at5g47640
nuclear factor Y, subunit B2 - "nuclear factor Y, subunit B2" (NF-YB2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B3 (TAIR:AT4G14540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
9
at5g62430
cycling DOF factor 1 Dof-type zinc finger domain-containing protein, similar to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Represses expression of Constans (CO), a circadian regulator of flowering time. Interacts with LKP2 and FKF1. Expression oscillates under constant light conditions. Mainly expressed in the vasculature of cotyledons, leaves and hypocotyls, but also in stomata. Localized to the nucleus and acts as a repressor of CONSTANS through binding to the Dof binding sites in the CO promoter. Protein gets degraded by FKF1 in the afternoon. cycling DOF factor 1 (CDF1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 1130 Blast hits to 1085 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1125; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit