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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
 Highlight filters
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Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 8 " Y:" 25 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn012882 LinkIcon Negative ATH08n02740 LinkIcon PM018079 LinkIcon 0.960
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH11n00833 LinkIcon PM018079 LinkIcon 0.959
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH06n00971 LinkIcon PM018079 LinkIcon 0.953
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH08n02318 LinkIcon PM018079 LinkIcon 0.942
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH11n01142 LinkIcon PM018079 LinkIcon 0.940
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH10n01252 LinkIcon PM018079 LinkIcon 0.935
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH07n01361 LinkIcon PM018079 LinkIcon 0.934
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH12n00744 LinkIcon PM018079 LinkIcon 0.933
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH10n01255 LinkIcon PM018079 LinkIcon 0.931
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH14n01918 LinkIcon PM018079 LinkIcon 0.930
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH63n01736 LinkIcon PT210880 LinkIcon 0.928
Sinapic acid; MS2; Q-Tof; [M-H]-
   Sinapic acid
  SA
  Sin
  Sinapate
  Sinapinic acid
  3,5-dimethoxy-4-hydroxycinnamic acid
  4-Hydroxy-3,5-dimethoxy-cinnamic acid
  (E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoic acid
ATH56n02344 LinkIcon PM018079 LinkIcon 0.926
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH12n01008 LinkIcon PM018079 LinkIcon 0.921
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH13n01721 LinkIcon PT210880 LinkIcon 0.921
Sinapic acid; MS2; Q-Tof; [M-H]-
   Sinapic acid
  SA
  Sin
  Sinapate
  Sinapinic acid
  3,5-dimethoxy-4-hydroxycinnamic acid
  4-Hydroxy-3,5-dimethoxy-cinnamic acid
  (E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoic acid
ATH61n02483 LinkIcon PM018079 LinkIcon 0.920
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH10n00955 LinkIcon PM018079 LinkIcon 0.919
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH61n02930 LinkIcon PM018079 LinkIcon 0.919
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH60n02278 LinkIcon PM018079 LinkIcon 0.918
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH63n01733 LinkIcon PM018079 LinkIcon 0.918
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH58n03134 LinkIcon PM018079 LinkIcon 0.916
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH06n01334 LinkIcon PM018079 LinkIcon 0.915
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH56n03108 LinkIcon PM018079 LinkIcon 0.914
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH58n03402 LinkIcon PM018079 LinkIcon 0.913
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH57n03106 LinkIcon PM018079 LinkIcon 0.910
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH59n02273 LinkIcon PM018079 LinkIcon 0.910
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH60n03037 LinkIcon PM018079 LinkIcon 0.903
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH59n03040 LinkIcon PM018079 LinkIcon 0.902
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH61n02200 LinkIcon PM018079 LinkIcon 0.901
Sinapoymalate; MS2; Q-TOF; M-H; 15->55V
   Sinapoymalate
ATH06n00974 LinkIcon - -
-
ATH07n01365 LinkIcon - -
-
ATH07n01763 LinkIcon - -
-
ATH07n01768 LinkIcon - -
-
ATH08n02062 LinkIcon - -
-
ATH08n03005 LinkIcon - -
-
ATH09n02025 LinkIcon - -
-
ATH09n02028 LinkIcon - -
-
ATH09n02711 LinkIcon - -
-
ATH09n02714 LinkIcon - -
-
ATH10n00958 LinkIcon - -
-
ATH11n00836 LinkIcon - -
-
ATH11n01146 LinkIcon - -
-
ATH12n00748 LinkIcon - -
-
ATH12n01011 LinkIcon - -
-
ATH13n02265 LinkIcon - -
-
ATH13n02268 LinkIcon - -
-
ATH14n02190 LinkIcon - -
-
ATH56n02347 LinkIcon - -
-
ATH56n03111 LinkIcon - -
-
ATH57n02327 LinkIcon - -
-
ATH57n02598 LinkIcon - -
-
ATH57n03103 LinkIcon - -
-
ATH58n02349 LinkIcon - -
-
ATH58n02352 LinkIcon - -
-
ATH59n02270 LinkIcon - -
-
ATH59n03037 LinkIcon - -
-
ATH60n02275 LinkIcon - -
-
ATH60n03034 LinkIcon - -
-
ATH61n02927 LinkIcon - -
-
ATH62n02165 LinkIcon - -
-
ATH62n02168 LinkIcon - -
-
ATH62n02892 LinkIcon - -
-
ATH62n02895 LinkIcon - -
-
ATH63n02507 LinkIcon - -
-
ATH64n02914 LinkIcon - -
-
2 adn032461 LinkIcon Negative ATH09n06750 LinkIcon - -
-
ATH09n07842 LinkIcon - -
-
ATH10n04736 LinkIcon - -
-
ATH14n06140 LinkIcon - -
-
ATH56n08887 LinkIcon - -
-
ATH57n08628 LinkIcon - -
-
ATH58n08243 LinkIcon - -
-
ATH59n08057 LinkIcon - -
-
ATH60n08464 LinkIcon - -
-
ATH60n08709 LinkIcon - -
-
ATH61n06768 LinkIcon - -
-
ATH61n07743 LinkIcon - -
-
ATH62n07070 LinkIcon - -
-
ATH62n07803 LinkIcon - -
-
ATH63n07965 LinkIcon - -
-
ATH64n07201 LinkIcon - -
-
ATH64n07924 LinkIcon - -
-
3 adn035563 LinkIcon Negative ATH09n08038 LinkIcon - -
-
ATH10n05717 LinkIcon - -
-
ATH56n08877 LinkIcon - -
-
ATH57n09588 LinkIcon - -
-
ATH59n09052 LinkIcon - -
-
4 adp006547 LinkIcon Positive ATH09p03747 LinkIcon PM018186 LinkIcon 0.990
p-Coumaroylagmatine; MS2; Q-TOF; M+H; 15->55V
   p-Coumaroylagmatine
ATH59p03255 LinkIcon PM018186 LinkIcon 0.984
p-Coumaroylagmatine; MS2; Q-TOF; M+H; 15->55V
   p-Coumaroylagmatine
ATH10p03088 LinkIcon PM018186 LinkIcon 0.983
p-Coumaroylagmatine; MS2; Q-TOF; M+H; 15->55V
   p-Coumaroylagmatine
ATH10p03631 LinkIcon PM018186 LinkIcon 0.982
p-Coumaroylagmatine; MS2; Q-TOF; M+H; 15->55V
   p-Coumaroylagmatine
ATH59p03887 LinkIcon PM018186 LinkIcon 0.977
p-Coumaroylagmatine; MS2; Q-TOF; M+H; 15->55V
   p-Coumaroylagmatine
ATH09p03193 LinkIcon PM018186 LinkIcon 0.972
p-Coumaroylagmatine; MS2; Q-TOF; M+H; 15->55V
   p-Coumaroylagmatine
ATH11p03160 LinkIcon - -
-
ATH11p03760 LinkIcon - -
-
ATH59p03581 LinkIcon - -
-
ATH61p04858 LinkIcon - -
-
ATH61p05429 LinkIcon - -
-
ATH63p03262 LinkIcon - -
-
ATH63p03889 LinkIcon - -
-
ATH64p03277 LinkIcon - -
-
5 adp015434 LinkIcon Positive ATH58p08015 LinkIcon PM018182 LinkIcon 0.977
Spermidine-p-coumaroyl-feruloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-p-coumaroyl-feruloyl
ATH56p07738 LinkIcon PM018182 LinkIcon 0.934
Spermidine-p-coumaroyl-feruloyl; MS2; Q-TOF; M+H; 15->55V
   Spermidine-p-coumaroyl-feruloyl
ATH57p06525 LinkIcon PM008012 LinkIcon 0.917
1-O-Sinapoylglucose; MS2; QIT; M+Na; 15->55V
   1-O-Sinapoylglucose
  Sinapoyltransferase, sinapoylglucose-malate
ATH09p07174 LinkIcon PT112580 LinkIcon 0.916
delta-Tocotrienol; MS2; Q-Tof; [M+H]+
   delta-Tocotrienol
  8-Methyltocotrienol
  (R)-delta-Tocotrienol
  (2R)-2,8-dimethyl-2-[(3E,7E)-4,8,12-trimethyltrideca-3,7,11-trienyl]chroman-6-ol
ATH07p06849 LinkIcon PT112530 LinkIcon 0.913
Calciferol; MS2; Q-Tof; [M+H]+
   Calciferol
  Vitamin D2
  Ergocalciferol
  Viosterin
  Osteil
  Viosterol
  Ercalciol
  Irradiated ergosterol
  Condacaps
  Condocaps
  Condol
  Crtron
  Crystallina
  Daral
  (5Z,7E,22E)-(3S)-9,10-Secoergosta-5,7,10(19),22-tetraen-3-ol
  Davitin
  Deltalin
  Deratol
  Diactol
  Drisdol
  Ergorone
  Ertron
  Fortodyl
  Geltabs
  Hyperkil
  Irradiated ergosta-5,7,22-trien-3-beta-ol
  Metadee
ATH09p06927 LinkIcon PS022802 LinkIcon 0.908
Etidronic acid; MS2; QqQ; positive; CE 20 V
   Etidronic acid
  HEDPA
  HEDP
  EHDP
  1-Hydroxyethane-1,1-diphosphonic Acid
  1-Hydroxyethylidenediphosphonic acid
  1,1,1-Ethanetriol diphosphonate
  Turpinal SL
ATH59p06953 LinkIcon PM008012 LinkIcon 0.903
1-O-Sinapoylglucose; MS2; QIT; M+Na; 15->55V
   1-O-Sinapoylglucose
  Sinapoyltransferase, sinapoylglucose-malate
ATH07p06437 LinkIcon - -
-
ATH07p06845 LinkIcon - -
-
ATH09p06681 LinkIcon - -
-
ATH09p06685 LinkIcon - -
-
ATH09p07171 LinkIcon - -
-
ATH09p07172 LinkIcon - -
-
ATH10p06411 LinkIcon - -
-
ATH10p06686 LinkIcon - -
-
ATH10p06795 LinkIcon - -
-
ATH10p06799 LinkIcon - -
-
ATH10p07005 LinkIcon - -
-
ATH11p07190 LinkIcon - -
-
ATH11p07630 LinkIcon - -
-
ATH12p06606 LinkIcon - -
-
ATH12p06611 LinkIcon - -
-
ATH12p07005 LinkIcon - -
-
ATH13p08552 LinkIcon - -
-
ATH57p06717 LinkIcon - -
-
ATH57p06718 LinkIcon - -
-
ATH57p06721 LinkIcon - -
-
ATH59p06498 LinkIcon - -
-
ATH59p06728 LinkIcon - -
-
ATH59p06952 LinkIcon - -
-
ATH61p08636 LinkIcon - -
-
ATH61p08921 LinkIcon - -
-
ATH62p06274 LinkIcon - -
-
ATH62p06656 LinkIcon - -
-
ATH62p06657 LinkIcon - -
-
ATH63p06893 LinkIcon - -
-
ATH63p07150 LinkIcon - -
-
ATH63p07153 LinkIcon - -
-
ATH63p07427 LinkIcon - -
-
ATH63p08814 LinkIcon - -
-
ATH63p10087 LinkIcon - -
-
6 adp030677 LinkIcon Positive ATH11p10994 LinkIcon - -
-
ATH57p12941 LinkIcon - -
-
ATH61p15146 LinkIcon - -
-
ATH63p15977 LinkIcon - -
-
ATH64p14665 LinkIcon - -
-

2. Gene information

No. ID Short description Curator summary Computational description
1
at1g14580
C2H2-like zinc finger protein - C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, 4 leaf senescence stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 4 (TAIR:AT2G02080.1); Has 50611 Blast hits to 19416 proteins in 277 species: Archae - 0; Bacteria - 3; Metazoa - 47960; Fungi - 322; Plants - 829; Viruses - 2; Other Eukaryotes - 1495 (source: NCBI BLink).
2
at1g22590
AGAMOUS-like 87 - AGAMOUS-like 87 (AGL87); Has 9 Blast hits to 9 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
3
at3g30280
HXXXD-type acyl-transferase family protein - HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT4G15390.1); Has 2342 Blast hits to 2327 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 49; Plants - 2289; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
4
at3g50440
methyl esterase 10 Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro. methyl esterase 10 (MES10); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1602 Blast hits to 1600 proteins in 360 species: Archae - 4; Bacteria - 838; Metazoa - 1; Fungi - 25; Plants - 612; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink).
5
at3g58070
C2H2 and C2HC zinc fingers superfamily protein Putative transcription factor, contains C2H2 domain, regulates aspects of shoot maturation in Arabidopsis thaliana. GIS loss-of-function mutations affect the epidermal differentiation of inflorescence organs, causing a premature decrease in trichome production on successive leaves, stem internodes, and branches. Overexpression has the opposite effect on trichome initiation and causes other heterochronic phenotypes, affecting flowering and juvenileç´¡dult leaf transition and inducing the formation of rosette leaves on inflorescence stems. GLABROUS INFLORESCENCE STEMS (GIS); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, trichome branching, response to gibberellin stimulus, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 8 (TAIR:AT2G41940.1); Has 936 Blast hits to 936 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 934; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
6
at4g10150
RING/U-box superfamily protein - RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10160.1); Has 9409 Blast hits to 9387 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2329; Fungi - 766; Plants - 4947; Viruses - 49; Other Eukaryotes - 1312 (source: NCBI BLink).
7
at4g10160
RING/U-box superfamily protein - RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10150.1); Has 9335 Blast hits to 9314 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2290; Fungi - 731; Plants - 4944; Viruses - 53; Other Eukaryotes - 1311 (source: NCBI BLink).
8
at4g13840
HXXXD-type acyl-transferase family protein - HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G23840.1); Has 1220 Blast hits to 1220 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 1216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
9
at5g46690
beta HLH protein 71 - beta HLH protein 71 (bHLH071); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
10
at5g50915
basic helix-loop-helix (bHLH) DNA-binding superfamily protein - basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G68920.3); Has 2137 Blast hits to 2129 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 37; Plants - 2099; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

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RIKEN Center for Sustainable Resource Science
Integrated Genome Informatics Research Unit